• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig2-108K12
        

               
Conread position:
               
1-369
               

               
Cow position:
               
chr17:40405874-40406243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 201
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr17:7251617-7251999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 127
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr17:16117863-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr17:13237156-13236759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr17:27667627-27667205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr17:21874750-21874315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 205
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr17:25167868-25168328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr17:21362979-21363422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr17:29951118-29951559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr17:43725945-43725498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr17:15364000-15363522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr17:5896345-5895861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 82
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr17:20129247-20129703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr17:3386865-3387324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 37
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr17:5246448-5246948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr17:20358447-20358923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 29
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr17:27305732-27306217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 94
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr17:40892726-40893210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 30
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr17:3470998-3471486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 98
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr17:148526-149034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 100
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr17:12059525-12059012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 100
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr17:24549736-24550256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 213
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr17:5733867-5733390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr17:15334154-15333624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 247
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr17:2034110-2034623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr17:34317150-34316619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 258
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr17:255637-256176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 217
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr17:25542239-25541711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 64
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr17:16854490-16853947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 156
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr17:24026367-24025815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 213
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr17:14249468-14248902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr17:25077258-25076715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 210
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr17:20022943-20022400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 64
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr17:26230506-26231068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr17:36331394-36330844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 14
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr17:24823832-24824358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 100
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr17:33289084-33288541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 28
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr17:16446865-16446319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 208
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr17:28539608-28540145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr17:5767468-5768022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 129
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr17:22563757-22564303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr17:23063282-23063838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 120
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr17:1410677-1410117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 91
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr17:32651184-32651736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 64
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr17:20780086-20780637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 137
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr17:21973564-21973008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr17:10529178-10528605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr17:23101647-23101096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 206
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr17:25188857-25189408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 62
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr17:29715622-29715082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 209
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr17:32989062-32989599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 36
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr17:32994044-32993501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 36
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:5899939-5900493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:6566046-6566605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 177
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:14003397-14003949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 93
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:14026335-14025786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:16447924-16448435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
320, 83
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:20848103-20848646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 160
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:21336129-21335568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 36
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:21494951-21495495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 41
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:21960120-21959564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 179
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:25740510-25741069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr17:29292809-29292258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 204
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr17:1568602-1568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 190
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr17:15188509-15187942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr17:17221912-17222468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 170
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr17:25755345-25755780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 212
               

               
Conread position:
               
2-526
               

               
Cow position:
               
chr17:33272093-33271587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 14
               

               
Conread position:
               
2-542
               

               
Cow position:
               
chr17:30539681-30539154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 205
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr17:12289851-12289286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 223
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr17:20093550-20093004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 30
               

               
Conread position:
               
2-557
               

               
Cow position:
               
chr17:20800384-20800940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 205
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr17:11102222-11101673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 186
               

               
Conread position:
               
3-375
               

               
Cow position:
               
chr17:20269181-20269543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 204
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr17:10649420-10649896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 34
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr17:18201346-18201873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 199
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr17:29156998-29157534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr17:11216311-11215770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr17:20993473-20992918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 206
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr17:41029515-41030062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 210
               

               
Conread position:
               
3-557
               

               
Cow position:
               
chr17:13940748-13940195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr17:21038851-21039233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 97
               

               
Conread position:
               
4-491
               

               
Cow position:
               
chr17:13144112-13143626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 201
               

               
Conread position:
               
4-554
               

               
Cow position:
               
chr17:11375131-11374573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 212
               

               
Conread position:
               
4-554
               

               
Cow position:
               
chr17:30664845-30665396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 176
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr17:730877-730470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 136
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr17:23337443-23337025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 202
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr17:4601970-4601450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 32
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr17:28130468-28129939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 10
               

               
Conread position:
               
5-535
               

               
Cow position:
               
chr17:25145741-25145223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr17:39735753-39736292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
5-551
               

               
Cow position:
               
chr17:28359397-28359962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 294
               

               
Conread position:
               
5-553
               

               
Cow position:
               
chr17:24553577-24554119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 11
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr17:38832625-38833167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 107
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr17:40771396-40771954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
5-557
               

               
Cow position:
               
chr17:30529957-30529418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 56
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr17:11056803-11056315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
7-486
               

               
Cow position:
               
chr17:27698127-27697639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 212
               

               
Conread position:
               
7-548
               

               
Cow position:
               
chr17:18592012-18592560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
8-534
               

               
Cow position:
               
chr17:39412923-39412399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
10-554
               

               
Cow position:
               
chr17:32027883-32027328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 61
               

               
Conread position:
               
11-547
               

               
Cow position:
               
chr17:34595515-34596057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 202
               

               
Conread position:
               
11-553
               

               
Cow position:
               
chr17:11618158-11618707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 66
               

               
Conread position:
               
12-553
               

               
Cow position:
               
chr17:32138818-32138301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 53
               

               
Conread position:
               
12-557
               

               
Cow position:
               
chr17:36265655-36265126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 190
               

               
Conread position:
               
14-554
               

               
Cow position:
               
chr17:3781615-3782167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 399
               

               
Conread position:
               
15-537
               

               
Cow position:
               
chr17:29276813-29277338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 192
               

               
Conread position:
               
18-556
               

               
Cow position:
               
chr17:26764597-26765149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 188
               

               
Conread position:
               
23-554
               

               
Cow position:
               
chr17:4213346-4213867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 190
               

               
Conread position:
               
24-408
               

               
Cow position:
               
chr17:15984943-15985324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
68, 162
               

               
Conread position:
               
24-530
               

               
Cow position:
               
chr17:14231961-14231464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
24-551
               

               
Cow position:
               
chr17:8690868-8690331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
24-554
               

               
Cow position:
               
chr17:14034057-14033518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 183
               

               
Conread position:
               
24-554
               

               
Cow position:
               
chr17:33934156-33933619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 201
               

               
Conread position:
               
24-556
               

               
Cow position:
               
chr17:11382125-11381601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 183
               

               
Conread position:
               
25-538
               

               
Cow position:
               
chr17:18861127-18860613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 181
               

               
Conread position:
               
25-548
               

               
Cow position:
               
chr17:5000986-5000470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
26-498
               

               
Cow position:
               
chr17:19998728-19999206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 115
               

               
Conread position:
               
27-375
               

               
Cow position:
               
chr17:20303689-20304039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
27-554
               

               
Cow position:
               
chr17:923473-924003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 180
               

               
Conread position:
               
28-413
               

               
Cow position:
               
chr17:17453018-17452623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 56
               

               
Conread position:
               
30-418
               

               
Cow position:
               
chr17:30204250-30204641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
30-553
               

               
Cow position:
               
chr17:20083916-20083399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 177
               

               
Conread position:
               
31-356
               

               
Cow position:
               
chr17:23517569-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 70
               

               
Conread position:
               
31-447
               

               
Cow position:
               
chr17:18494929-18494502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 190
               

               
Conread position:
               
31-554
               

               
Cow position:
               
chr17:20233824-20234335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 182
               

               
Conread position:
               
32-554
               

               
Cow position:
               
chr17:11839298-11839846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 176
               

               
Conread position:
               
33-485
               

               
Cow position:
               
chr17:5042087-5041632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
38-417
               

               
Cow position:
               
chr17:3499066-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 174
               

               
Conread position:
               
38-492
               

               
Cow position:
               
chr17:15300260-15299807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 155
               

               
Conread position:
               
39-356
               

               
Cow position:
               
chr17:22057569-22057251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
43-554
               

               
Cow position:
               
chr17:1493547-1493025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 164
               

               
Conread position:
               
45-548
               

               
Cow position:
               
chr17:3684046-3683552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 162
               

               
Conread position:
               
47-548
               

               
Cow position:
               
chr17:39857025-39857508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr17:21293434-21292920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
51-534
               

               
Cow position:
               
chr17:32365903-32366391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 156
               

               
Conread position:
               
51-547
               

               
Cow position:
               
chr17:9698096-9697565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
52-554
               

               
Cow position:
               
chr17:17061052-17060558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 25
               

               
Conread position:
               
54-554
               

               
Cow position:
               
chr17:13922099-13922606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 47
               

               
Conread position:
               
57-550
               

               
Cow position:
               
chr17:26084653-26085144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
63-554
               

               
Cow position:
               
chr17:9564941-9565425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 24
               

               
Conread position:
               
64-482
               

               
Cow position:
               
chr17:25608876-25608449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 143
               

               
Conread position:
               
68-557
               

               
Cow position:
               
chr17:20033278-20032785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 33
               

               
Conread position:
               
73-548
               

               
Cow position:
               
chr17:15103238-15102776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 14
               

               
Conread position:
               
75-422
               

               
Cow position:
               
chr17:38116028-38116401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
75-423
               

               
Cow position:
               
chr17:3518598-3518263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 134
               

               
Conread position:
               
76-360
               

               
Cow position:
               
chr17:24503492-24503779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 57
               

               
Conread position:
               
83-503
               

               
Cow position:
               
chr17:26182868-26183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
84-537
               

               
Cow position:
               
chr17:25815258-25815711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 123
               

               
Conread position:
               
84-554
               

               
Cow position:
               
chr17:40289350-40288876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 125
               

               
Conread position:
               
86-541
               

               
Cow position:
               
chr17:20361516-20361976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 59
               

               
Conread position:
               
86-554
               

               
Cow position:
               
chr17:9853638-9854100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 127
               

               
Conread position:
               
87-423
               

               
Cow position:
               
chr17:3843147-3843469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 13
               

               
Conread position:
               
87-536
               

               
Cow position:
               
chr17:37342819-37342381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 14
               

               
Conread position:
               
87-551
               

               
Cow position:
               
chr17:8280074-8279587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 179
               

               
Conread position:
               
87-552
               

               
Cow position:
               
chr17:43142064-43141587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
87-554
               

               
Cow position:
               
chr17:43717655-43717212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 120
               

               
Conread position:
               
88-405
               

               
Cow position:
               
chr17:31798457-31798789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
125, 327
               

               
Conread position:
               
94-383
               

               
Cow position:
               
chr17:8644697-8644989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 116
               

               
Conread position:
               
94-485
               

               
Cow position:
               
chr17:242297-242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
95-554
               

               
Cow position:
               
chr17:24077066-24077525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
100-554
               

               
Cow position:
               
chr17:24883897-24883447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 67
               

               
Conread position:
               
101-415
               

               
Cow position:
               
chr17:7821367-7821050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr17:10789980-10790304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
218, 78
               

               
Conread position:
               
101-537
               

               
Cow position:
               
chr17:18490203-18490647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 94
               

               
Conread position:
               
101-557
               

               
Cow position:
               
chr17:12929878-12929404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
102-552
               

               
Cow position:
               
chr17:21680436-21680901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 105
               

               
Conread position:
               
104-447
               

               
Cow position:
               
chr17:40642420-40642074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
215, 102
               

               
Conread position:
               
106-551
               

               
Cow position:
               
chr17:27795320-27795775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 101
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr17:17683230-17682788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
214, 232
               

               
Conread position:
               
107-557
               

               
Cow position:
               
chr17:11397343-11397792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 106
               

               
Conread position:
               
108-424
               

               
Cow position:
               
chr17:1463833-1464154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
151, 103
               

               
Conread position:
               
110-548
               

               
Cow position:
               
chr17:1061382-1060930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 74
               

               
Conread position:
               
114-485
               

               
Cow position:
               
chr17:3306550-3306915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 8
               

               
Conread position:
               
117-548
               

               
Cow position:
               
chr17:40421352-40421789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 94
               

               
Conread position:
               
118-439
               

               
Cow position:
               
chr17:4606656-4606966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 87
               

               
Conread position:
               
118-554
               

               
Cow position:
               
chr17:2810300-2810756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
118-554
               

               
Cow position:
               
chr17:30718731-30718294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 7
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr17:9117334-9117762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 35
               

               
Conread position:
               
121-353
               

               
Cow position:
               
chr17:35439782-35439555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
121-356
               

               
Cow position:
               
chr17:26174636-26174870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
208, 80
               

               
Conread position:
               
121-546
               

               
Cow position:
               
chr17:25900886-25901316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 84
               

               
Conread position:
               
121-554
               

               
Cow position:
               
chr17:34079411-34078987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
125-548
               

               
Cow position:
               
chr17:40331460-40331882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 82
               

               
Conread position:
               
129-547
               

               
Cow position:
               
chr17:17121371-17121788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
129-553
               

               
Cow position:
               
chr17:11171491-11171915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 84
               

               
Conread position:
               
130-485
               

               
Cow position:
               
chr17:1295875-1295514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
130-537
               

               
Cow position:
               
chr17:20889071-20889478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 80
               

               
Conread position:
               
130-554
               

               
Cow position:
               
chr17:40312428-40312829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
134-538
               

               
Cow position:
               
chr17:24973650-24974049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
134-549
               

               
Cow position:
               
chr17:5224103-5224518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 76
               

               
Conread position:
               
134-552
               

               
Cow position:
               
chr17:38614660-38615082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
135-549
               

               
Cow position:
               
chr17:15664370-15664796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 72
               

               
Conread position:
               
136-478
               

               
Cow position:
               
chr17:21313113-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
136-510
               

               
Cow position:
               
chr17:5688645-5688281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 62
               

               
Conread position:
               
136-543
               

               
Cow position:
               
chr17:28285317-28284915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
168, 34
               

               
Conread position:
               
136-546
               

               
Cow position:
               
chr17:18109384-18108971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
138-478
               

               
Cow position:
               
chr17:12216367-12216033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
141-491
               

               
Cow position:
               
chr17:33291090-33290748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
141-554
               

               
Cow position:
               
chr17:13244313-13243926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 37
               

               
Conread position:
               
148-553
               

               
Cow position:
               
chr17:18720730-18720324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 45
               

               
Conread position:
               
148-557
               

               
Cow position:
               
chr17:25796623-25796210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
149-554
               

               
Cow position:
               
chr17:19891332-19891748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
170, 22
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr17:25908812-25909054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
170, 41
               

               
Conread position:
               
155-394
               

               
Cow position:
               
chr17:12054441-12054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
166, 52
               

               
Conread position:
               
156-546
               

               
Cow position:
               
chr17:18472909-18473279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
156-554
               

               
Cow position:
               
chr17:8544030-8544430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
158-548
               

               
Cow position:
               
chr17:21004104-21003711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
158-548
               

               
Cow position:
               
chr17:22032959-22032577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
158-554
               

               
Cow position:
               
chr17:8079041-8079436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 40
               

               
Conread position:
               
162-548
               

               
Cow position:
               
chr17:5423348-5422951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
162-553
               

               
Cow position:
               
chr17:11278294-11277905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
162-553
               

               
Cow position:
               
chr17:17950971-17951354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
162-553
               

               
Cow position:
               
chr17:37163801-37163408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 51
               

               
Conread position:
               
162-554
               

               
Cow position:
               
chr17:20126349-20126721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr17:3503312-3503704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
169-482
               

               
Cow position:
               
chr17:42347486-42347170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
169-544
               

               
Cow position:
               
chr17:26818717-26818344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
170-534
               

               
Cow position:
               
chr17:11296374-11296748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 27
               

               
Conread position:
               
173-554
               

               
Cow position:
               
chr17:21115206-21114830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
178-485
               

               
Cow position:
               
chr17:33121828-33122149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
180-421
               

               
Cow position:
               
chr17:29040723-29040478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr17:17059187-17059546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 25
               

               
Conread position:
               
182-418
               

               
Cow position:
               
chr17:24876885-24877127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
184-485
               

               
Cow position:
               
chr17:21031538-21031844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
137, 23
               

               
Conread position:
               
184-554
               

               
Cow position:
               
chr17:27819049-27819419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
187-548
               

               
Cow position:
               
chr17:18495754-18495402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
188-557
               

               
Cow position:
               
chr17:16371004-16371383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr17:27142513-27142869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
194-486
               

               
Cow position:
               
chr17:1526593-1526293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
194-540
               

               
Cow position:
               
chr17:7132700-7132329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 319
               

               
Conread position:
               
194-554
               

               
Cow position:
               
chr17:36275113-36275457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
198-379
               

               
Cow position:
               
chr17:13124973-13124786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
204-503
               

               
Cow position:
               
chr17:35311189-35311503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
208-548
               

               
Cow position:
               
chr17:27047934-27048273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
211-537
               

               
Cow position:
               
chr17:38200994-38200656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
14, 289
               

               
Conread position:
               
212-360
               

               
Cow position:
               
chr17:20055443-20055595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
212-405
               

               
Cow position:
               
chr17:1359022-1358829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
212-501
               

               
Cow position:
               
chr17:23245986-23246279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
212-537
               

               
Cow position:
               
chr17:29080341-29080650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
215, 12
               

               
Conread position:
               
212-549
               

               
Cow position:
               
chr17:7810966-7810636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 175
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr17:11172843-11172491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr17:31585206-31585542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
212-560
               

               
Cow position:
               
chr17:33999269-33998920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
213-424
               

               
Cow position:
               
chr17:21017568-21017787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
213-425
               

               
Cow position:
               
chr17:30999552-30999758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
213-551
               

               
Cow position:
               
chr17:39012492-39012839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
10, 251
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr17:36817719-36817918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr17:38276469-38276672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
216-474
               

               
Cow position:
               
chr17:4824278-4824535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr17:2079538-2079811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
216-492
               

               
Cow position:
               
chr17:9079407-9079141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chr17:24761446-24761161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
216-514
               

               
Cow position:
               
chr17:9778028-9778332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr17:24587395-24587747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 290
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr17:9746298-9746636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr17:20157396-20157731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
182, 5
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr17:32554246-32553931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr17:34948417-34948758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 252
               

               
Conread position:
               
217-418
               

               
Cow position:
               
chr17:16307159-16307363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
217-491
               

               
Cow position:
               
chr17:20835373-20835643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-509
               

               
Cow position:
               
chr17:20839778-20839487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-531
               

               
Cow position:
               
chr17:35126492-35126811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
217-548
               

               
Cow position:
               
chr17:11664808-11664465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr17:6423539-6423887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr17:21244004-21243667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr17:32419338-32418993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr17:31481262-31480914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
218-554
               

               
Cow position:
               
chr17:20932116-20932455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
218-556
               

               
Cow position:
               
chr17:14848744-14848420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
219-553
               

               
Cow position:
               
chr17:25128567-25128230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
100, 10
               

               
Conread position:
               
221-485
               

               
Cow position:
               
chr17:18884564-18884273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
221-549
               

               
Cow position:
               
chr17:12325963-12325646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 166
               

               
Conread position:
               
221-551
               

               
Cow position:
               
chr17:7697839-7698168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
222-360
               

               
Cow position:
               
chr17:7423657-7423515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
222-417
               

               
Cow position:
               
chr17:21419216-21419420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
222-418
               

               
Cow position:
               
chr17:3182800-3182600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr17:10220265-10220463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
222-466
               

               
Cow position:
               
chr17:4473019-4472777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
205, 27
               

               
Conread position:
               
222-486
               

               
Cow position:
               
chr17:3466620-3466886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
222-496
               

               
Cow position:
               
chr17:15132950-15133211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
261, 28
               

               
Conread position:
               
222-515
               

               
Cow position:
               
chr17:41290233-41289937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
222-546
               

               
Cow position:
               
chr17:30713137-30713461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
222-546
               

               
Cow position:
               
chr17:39771180-39771515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr17:24004179-24004490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
231, 10
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:2662193-2662548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 291
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:11156709-11156370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 193
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:12220154-12219815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
97, 151
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:15340945-15340628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
202, 28
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:15684289-15684634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 234
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:21739100-21738750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 287
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:25097247-25097579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
223-411
               

               
Cow position:
               
chr17:25078208-25078024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
170, 36
               

               
Conread position:
               
223-423
               

               
Cow position:
               
chr17:22781477-22781681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
223-495
               

               
Cow position:
               
chr17:21323085-21323342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
223-537
               

               
Cow position:
               
chr17:24752509-24752214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
223-553
               

               
Cow position:
               
chr17:33792967-33793286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
175, 128
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr17:11832351-11831991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr17:17410083-17410417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr17:24580514-24580171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
224-418
               

               
Cow position:
               
chr17:1328184-1327986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
224-526
               

               
Cow position:
               
chr17:20870307-20870002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
224-544
               

               
Cow position:
               
chr17:27274348-27274680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
224-553
               

               
Cow position:
               
chr17:32472005-32471658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
226-405
               

               
Cow position:
               
chr17:21710293-21710477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
226-552
               

               
Cow position:
               
chr17:40741435-40741774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 233
               

               
Conread position:
               
226-554
               

               
Cow position:
               
chr17:11281319-11280976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
226-554
               

               
Cow position:
               
chr17:30236016-30236319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
227-418
               

               
Cow position:
               
chr17:7890390-7890189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
227-491
               

               
Cow position:
               
chr17:18929289-18929041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr17:21755652-21755311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 236
               

               
Conread position:
               
227-558
               

               
Cow position:
               
chr17:5250767-5250451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
228-494
               

               
Cow position:
               
chr17:27765071-27765339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 88
               

               
Conread position:
               
228-497
               

               
Cow position:
               
chr17:966949-966677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 223
               

               
Conread position:
               
228-557
               

               
Cow position:
               
chr17:11361973-11362301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
103, 75
               

               
Conread position:
               
229-548
               

               
Cow position:
               
chr17:38646859-38647179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
229-549
               

               
Cow position:
               
chr17:10446707-10447028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 148
               

               
Conread position:
               
229-557
               

               
Cow position:
               
chr17:32279116-32278780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 242
               

               
Conread position:
               
229-559
               

               
Cow position:
               
chr17:25032681-25032353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 101
               

               
Conread position:
               
231-552
               

               
Cow position:
               
chr17:27429371-27429687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 151
               

               
Conread position:
               
234-469
               

               
Cow position:
               
chr17:15067827-15067584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
234-503
               

               
Cow position:
               
chr17:44232924-44232639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
31, 271
               

               
Conread position:
               
234-508
               

               
Cow position:
               
chr17:6624054-6624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 178
               

               
Conread position:
               
234-550
               

               
Cow position:
               
chr17:21628278-21628598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 96
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr17:33052659-33052975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 189
               

               
Conread position:
               
235-356
               

               
Cow position:
               
chr17:10432398-10432277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
235-548
               

               
Cow position:
               
chr17:29356423-29356122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
236-546
               

               
Cow position:
               
chr17:3152525-3152208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
237-557
               

               
Cow position:
               
chr17:21599883-21599556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
239-419
               

               
Cow position:
               
chr17:21412446-21412260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
239-481
               

               
Cow position:
               
chr17:26224319-26224562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
239-545
               

               
Cow position:
               
chr17:32273881-32273572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
239-548
               

               
Cow position:
               
chr17:31231313-31231005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
239-549
               

               
Cow position:
               
chr17:18824590-18824905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 226
               

               
Conread position:
               
239-553
               

               
Cow position:
               
chr17:21434928-21434608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
239-561
               

               
Cow position:
               
chr17:5006690-5006359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 181
               

               
Conread position:
               
240-524
               

               
Cow position:
               
chr17:7648022-7648306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
118, 90
               

               
Conread position:
               
240-545
               

               
Cow position:
               
chr17:1256702-1256385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
240-549
               

               
Cow position:
               
chr17:24490323-24490660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 277
               

               
Conread position:
               
241-537
               

               
Cow position:
               
chr17:5514562-5514867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
241-554
               

               
Cow position:
               
chr17:9911566-9911881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 160
               

               
Conread position:
               
242-552
               

               
Cow position:
               
chr17:14762316-14762000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
242-553
               

               
Cow position:
               
chr17:12108608-12108927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
243-423
               

               
Cow position:
               
chr17:4436426-4436243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
243-481
               

               
Cow position:
               
chr17:26881532-26881278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
243-485
               

               
Cow position:
               
chr17:25141265-25141501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
184, 116
               

               
Conread position:
               
243-485
               

               
Cow position:
               
chr17:32950077-32950332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
243-496
               

               
Cow position:
               
chr17:43323952-43323698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
243-539
               

               
Cow position:
               
chr17:12447593-12447283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
243-546
               

               
Cow position:
               
chr17:37482274-37481953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
71, 225
               

               
Conread position:
               
243-548
               

               
Cow position:
               
chr17:20072270-20071981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
243-553
               

               
Cow position:
               
chr17:25999921-26000240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
76, 259
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr17:33275941-33275626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
76, 84
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr17:41892263-41891937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
244-485
               

               
Cow position:
               
chr17:21697538-21697788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 182
               

               
Conread position:
               
245-552
               

               
Cow position:
               
chr17:37480186-37479880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 177
               

               
Conread position:
               
246-558
               

               
Cow position:
               
chr17:553163-552842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 211
               

               
Conread position:
               
247-549
               

               
Cow position:
               
chr17:24773492-24773798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 121
               

               
Conread position:
               
247-554
               

               
Cow position:
               
chr17:22806733-22806419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
7, 156
               

               
Conread position:
               
248-553
               

               
Cow position:
               
chr17:12536658-12536342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 250
               

               
Conread position:
               
250-549
               

               
Cow position:
               
chr17:908558-908859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
250-553
               

               
Cow position:
               
chr17:25611905-25612213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
178, 246
               

               
Conread position:
               
253-549
               

               
Cow position:
               
chr17:1063004-1063291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
253-549
               

               
Cow position:
               
chr17:36454949-36454662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
254-548
               

               
Cow position:
               
chr17:8837133-8836830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 246
               

               
Conread position:
               
254-548
               

               
Cow position:
               
chr17:36790955-36791244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
255-537
               

               
Cow position:
               
chr17:45465856-45466130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
184, 58
               

               
Conread position:
               
256-553
               

               
Cow position:
               
chr17:3577356-3577662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 162
               

               
Conread position:
               
256-557
               

               
Cow position:
               
chr17:36203672-36203358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
258-499
               

               
Cow position:
               
chr17:34208000-34207743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
259-413
               

               
Cow position:
               
chr17:3442847-3442689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
261-515
               

               
Cow position:
               
chr17:38363148-38362898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
261-553
               

               
Cow position:
               
chr17:24149000-24149307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
58, 243
               

               
Conread position:
               
262-477
               

               
Cow position:
               
chr17:32221338-32221118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
265-552
               

               
Cow position:
               
chr17:10459109-10458810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
265-553
               

               
Cow position:
               
chr17:3467596-3467875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
265-553
               

               
Cow position:
               
chr17:12590990-12591297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
265-553
               

               
Cow position:
               
chr17:20990367-20990067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
54, 224
               

               
Conread position:
               
266-485
               

               
Cow position:
               
chr17:30734451-30734237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
266-553
               

               
Cow position:
               
chr17:1634654-1634369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
266-557
               

               
Cow position:
               
chr17:18419501-18419809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr17:24821695-24821984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
267-558
               

               
Cow position:
               
chr17:5398606-5398313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 5
               

               
Conread position:
               
270-544
               

               
Cow position:
               
chr17:21918042-21917759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 215
               

               
Conread position:
               
270-554
               

               
Cow position:
               
chr17:30359310-30359582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
271-557
               

               
Cow position:
               
chr17:12306563-12306270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr17:10510828-10510603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
273-554
               

               
Cow position:
               
chr17:979318-979043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 197
               

               
Conread position:
               
274-553
               

               
Cow position:
               
chr17:4106150-4105871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
274-553
               

               
Cow position:
               
chr17:4121886-4121607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
276-425
               

               
Cow position:
               
chr17:38613084-38613238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
276-486
               

               
Cow position:
               
chr17:1353234-1353455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
277-496
               

               
Cow position:
               
chr17:21298063-21298299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 206
               

               
Conread position:
               
277-540
               

               
Cow position:
               
chr17:25916731-25917012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 184
               

               
Conread position:
               
277-552
               

               
Cow position:
               
chr17:27058714-27058435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
277-554
               

               
Cow position:
               
chr17:1562935-1562663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
277-554
               

               
Cow position:
               
chr17:7142703-7142985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 158
               

               
Conread position:
               
279-548
               

               
Cow position:
               
chr17:28467977-28468240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 112
               

               
Conread position:
               
280-461
               

               
Cow position:
               
chr17:40792065-40792253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
280-553
               

               
Cow position:
               
chr17:31701278-31701554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 166
               

               
Conread position:
               
281-554
               

               
Cow position:
               
chr17:18146025-18146309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
49, 219
               

               
Conread position:
               
282-554
               

               
Cow position:
               
chr17:11962705-11962410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
285-553
               

               
Cow position:
               
chr17:24559146-24559413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
286-466
               

               
Cow position:
               
chr17:484451-484636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
286-511
               

               
Cow position:
               
chr17:267736-267504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
72, 138
               

               
Conread position:
               
286-554
               

               
Cow position:
               
chr17:31037532-31037253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 212
               

               
Conread position:
               
287-485
               

               
Cow position:
               
chr17:5382137-5381937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
293-551
               

               
Cow position:
               
chr17:20874250-20874517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
296-553
               

               
Cow position:
               
chr17:24928337-24928598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
297-553
               

               
Cow position:
               
chr17:30728385-30728627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
299-553
               

               
Cow position:
               
chr17:9966163-9965904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 195
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr17:6328978-6329239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr17:21414969-21414703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr17:21437452-21437186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
299-562
               

               
Cow position:
               
chr17:4967980-4968247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
301-546
               

               
Cow position:
               
chr17:34860249-34860494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
302-537
               

               
Cow position:
               
chr17:27833492-27833249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
303-485
               

               
Cow position:
               
chr17:11921412-11921217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr17:14060906-14060656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
304-547
               

               
Cow position:
               
chr17:9056830-9056581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
308-554
               

               
Cow position:
               
chr17:20884397-20884647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 185
               

               
Conread position:
               
314-548
               

               
Cow position:
               
chr17:33658192-33657950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 183
               

               
Conread position:
               
317-462
               

               
Cow position:
               
chr17:20928797-20928946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
317-486
               

               
Cow position:
               
chr17:21911037-21910863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr17:26233943-26233711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr17:31581368-31581587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr17:40673269-40673489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr17:1040629-1040868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
110, 173
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr17:6848688-6848918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr17:7136865-7137103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 173
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr17:31856546-31856797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
47, 188
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr17:32348957-32349191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr17:25594820-25594564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr17:32280552-32280792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
317-558
               

               
Cow position:
               
chr17:1113768-1114016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 179
               

               
Conread position:
               
317-562
               

               
Cow position:
               
chr17:4300035-4299799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
204, 8
               

               
Conread position:
               
318-542
               

               
Cow position:
               
chr17:7654568-7654340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
318-556
               

               
Cow position:
               
chr17:36500689-36500928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 127
               

               
Conread position:
               
318-557
               

               
Cow position:
               
chr17:37699472-37699223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 180
               

               
Conread position:
               
319-485
               

               
Cow position:
               
chr17:25122523-25122351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
319-542
               

               
Cow position:
               
chr17:4786609-4786385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
319-548
               

               
Cow position:
               
chr17:23563904-23563677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
319-559
               

               
Cow position:
               
chr17:25501995-25502239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
107, 177
               

               
Conread position:
               
320-553
               

               
Cow position:
               
chr17:33411136-33410886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 180
               

               
Conread position:
               
320-556
               

               
Cow position:
               
chr17:23798168-23798407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
320-557
               

               
Cow position:
               
chr17:36179135-36178917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
321-462
               

               
Cow position:
               
chr17:14883197-14883048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
321-556
               

               
Cow position:
               
chr17:11215342-11215106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
322-547
               

               
Cow position:
               
chr17:38989993-38990224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
322-554
               

               
Cow position:
               
chr17:7600866-7601084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr17:1311237-1311423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
326-472
               

               
Cow position:
               
chr17:1505202-1505357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
327-485
               

               
Cow position:
               
chr17:20305941-20306107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
329-486
               

               
Cow position:
               
chr17:2839803-2839967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
329-548
               

               
Cow position:
               
chr17:35339020-35338803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 98
               

               
Conread position:
               
330-507
               

               
Cow position:
               
chr17:17266998-17266814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr17:34751509-34751282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 114
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr17:10561527-10561758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
331-557
               

               
Cow position:
               
chr17:7803277-7803048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
332-547
               

               
Cow position:
               
chr17:25616157-25616366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
332-548
               

               
Cow position:
               
chr17:21325231-21325450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
334-556
               

               
Cow position:
               
chr17:10432076-10431848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
334-557
               

               
Cow position:
               
chr17:3353781-3354009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
335-544
               

               
Cow position:
               
chr17:14652879-14652666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
335-556
               

               
Cow position:
               
chr17:35573664-35573878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
336-553
               

               
Cow position:
               
chr17:25514221-25514000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 131
               

               
Conread position:
               
337-557
               

               
Cow position:
               
chr17:25117793-25118011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
338-551
               

               
Cow position:
               
chr17:36864535-36864751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
80, 90
               

               
Conread position:
               
338-557
               

               
Cow position:
               
chr17:21743842-21744058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 104
               

               
Conread position:
               
339-545
               

               
Cow position:
               
chr17:23517037-23516827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
339-556
               

               
Cow position:
               
chr17:27203139-27202920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr17:21922718-21922510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
341-554
               

               
Cow position:
               
chr17:12880504-12880718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
342-554
               

               
Cow position:
               
chr17:21489716-21489501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
345-549
               

               
Cow position:
               
chr17:13638545-13638743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
346-537
               

               
Cow position:
               
chr17:15376521-15376701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
346-558
               

               
Cow position:
               
chr17:25342828-25342613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
348-554
               

               
Cow position:
               
chr17:22127842-22128046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 6
               

               
Conread position:
               
349-548
               

               
Cow position:
               
chr17:21758223-21758023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
350-549
               

               
Cow position:
               
chr17:27730457-27730662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
351-539
               

               
Cow position:
               
chr17:23883339-23883158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
352-557
               

               
Cow position:
               
chr17:38263568-38263363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
353-554
               

               
Cow position:
               
chr17:17193413-17193609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
355-546
               

               
Cow position:
               
chr17:9824590-9824785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 139
               

               
Conread position:
               
356-556
               

               
Cow position:
               
chr17:1466507-1466291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
359-548
               

               
Cow position:
               
chr17:22057097-22056910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
363-548
               

               
Cow position:
               
chr17:2275404-2275588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
363-553
               

               
Cow position:
               
chr17:8598176-8597987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr17:21806520-21806328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
363-557
               

               
Cow position:
               
chr17:29025997-29026199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
364-557
               

               
Cow position:
               
chr17:1469307-1469502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
366-558
               

               
Cow position:
               
chr17:36814292-36814489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
367-548
               

               
Cow position:
               
chr17:40638883-40639065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
368-558
               

               
Cow position:
               
chr17:4683281-4683477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
369-554
               

               
Cow position:
               
chr17:25718046-25718227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
370-538
               

               
Cow position:
               
chr17:39715094-39715268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
374-558
               

               
Cow position:
               
chr17:26806836-26807025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
378-554
               

               
Cow position:
               
chr17:25126296-25126474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
379-554
               

               
Cow position:
               
chr17:9770456-9770627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
379-554
               

               
Cow position:
               
chr17:16158436-16158615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
379-554
               

               
Cow position:
               
chr17:36093948-36094127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
380-554
               

               
Cow position:
               
chr17:7590511-7590339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
381-547
               

               
Cow position:
               
chr17:5288115-5288283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
382-553
               

               
Cow position:
               
chr17:39606378-39606553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 113
               

               
Conread position:
               
383-554
               

               
Cow position:
               
chr17:4891411-4891239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
385-554
               

               
Cow position:
               
chr17:22245943-22246113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 68
               

               
Conread position:
               
386-554
               

               
Cow position:
               
chr17:5011801-5011962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
387-553
               

               
Cow position:
               
chr17:26730656-26730488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
389-554
               

               
Cow position:
               
chr17:20810534-20810365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
390-554
               

               
Cow position:
               
chr17:37816234-37816069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
391-554
               

               
Cow position:
               
chr17:949932-950095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
395-554
               

               
Cow position:
               
chr17:28982140-28982303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
396-557
               

               
Cow position:
               
chr17:18818530-18818694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
400-554
               

               
Cow position:
               
chr17:28814533-28814369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
406-545
               

               
Cow position:
               
chr17:7567422-7567279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
407-535
               

               
Cow position:
               
chr17:21604387-21604518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
409-553
               

               
Cow position:
               
chr17:32265511-32265367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
413-554
               

               
Cow position:
               
chr17:7851066-7851211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
426-554
               

               
Cow position:
               
chr17:9940689-9940819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
427-556
               

               
Cow position:
               
chr17:3067858-3067733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
427-557
               

               
Cow position:
               
chr17:7571098-7571230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
429-557
               

               
Cow position:
               
chr17:34836170-34836298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
437-554
               

               
Cow position:
               
chr17:21788651-21788535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
437-554
               

               
Cow position:
               
chr17:24862466-24862582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
437-554
               

               
Cow position:
               
chr17:37129210-37129323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
439-552
               

               
Cow position:
               
chr17:25077755-25077645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
440-554
               

               
Cow position:
               
chr17:4833518-4833404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
441-546
               

               
Cow position:
               
chr17:13478814-13478709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
442-548
               

               
Cow position:
               
chr17:27440190-27440291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
443-554
               

               
Cow position:
               
chr17:12342466-12342357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
450-554
               

               
Cow position:
               
chr17:37430483-37430381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               
Show alignments to all cow chromosomes.