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Cow genome map

           
Conread name:
           
Pig2-108K12
        

               
Conread position:
               
1-388
               

               
Cow position:
               
chr21:34254689-34254302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 107
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr21:37942100-37941699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 215
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr21:19974340-19974741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr21:38691784-38692180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr21:13395145-13395558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr21:17417164-17416754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr21:13704095-13703674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr21:23683132-23683559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 214
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr21:41957593-41957165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 214
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr21:17713904-17714330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 21
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:13750979-13751404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 10
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:17434728-17434304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
178, 10
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:18934518-18934933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 35
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:21967911-21968331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:33420126-33419709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:34738184-34738624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr21:48484850-48484433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 205
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr21:393612-394050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 82
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr21:27376040-27376504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 58
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr21:912371-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 154
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr21:21216551-21216070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr21:20107160-20106683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 208
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr21:18932085-18932567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 37
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr21:18935362-18935830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr21:26829647-26829183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 208
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr21:27743331-27743829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 207
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr21:28617191-28617671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr21:1463823-1464312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 206
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr21:363243-363722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr21:17174732-17175237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr21:20925915-20925413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 162
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr21:6765110-6764610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 21
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr21:17414930-17414457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
427, 37
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr21:3236119-3236622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr21:32535575-32536074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr21:45866528-45867033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr21:4189430-4189943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 88
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr21:36756198-36756703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 182
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr21:17478976-17479487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 37
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr21:612177-611656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 205
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr21:24606986-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr21:24222949-24222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr21:20262746-20262217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 208
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr21:36163366-36162838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 33
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr21:3920622-3920084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 206
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr21:24130676-24131196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 156
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr21:12153725-12154261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 49
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr21:23192929-23192381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 207
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:150066-150606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:1196457-1197001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:2495581-2495040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 194
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:3782690-3783222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:5021058-5021606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 210
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:8981535-8980996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:13070274-13069731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 171
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:15545772-15545231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 118
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:18289254-18289793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 94
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:19957821-19958342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 73
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:27607773-27607229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:28914770-28914231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 13
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr21:42558694-42559222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 206
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr21:28442326-28442865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr21:29214565-29214027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 197
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr21:41579314-41579889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 162
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr21:44671342-44671875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 207
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr21:642936-643461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 66
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr21:5237996-5238530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 201
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr21:4905379-4904829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 208
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr21:7564732-7564169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 206
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr21:725298-724746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 90
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr21:33209791-33210327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 12
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr21:4282274-4281734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 196
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr21:32297912-32297378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 209
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr21:36297087-36297634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 17
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr21:37299057-37299603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr21:8126195-8125663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 36
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr21:28810659-28810120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr21:33729025-33729572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 36
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:81663-82213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 37
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:5595253-5595792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 208
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:12365977-12366517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 206
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:22855812-22856364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 127
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:27230201-27229648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 61
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:27341995-27341449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 100
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:28210776-28211337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 73
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:29069728-29069180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 33
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:31691086-31691628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 60
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:33933794-33933234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr21:46912133-46912691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 83
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:5898820-5898255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:6051067-6051650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 474
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:9940586-9940041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:10263631-10264180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:23801521-23800981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 46
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:30849347-30848794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 64
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:31576098-31576638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 212
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr21:38900374-38900920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr21:15584810-15584270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr21:4998895-4998345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr21:34391376-34390825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 167
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr21:38917825-38918348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 111
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr21:12465941-12466301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr21:29942587-29943009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chr21:9863033-9862560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr21:13897784-13898276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 198
               

               
Conread position:
               
2-537
               

               
Cow position:
               
chr21:10854177-10854712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 209
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr21:28512132-28512646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 189
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr21:33997633-33997095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr21:25764226-25764781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 90
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr21:39401185-39401736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr21:46973544-46973003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr21:25344467-25345009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 210
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr21:5566569-5567135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 222
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr21:24698068-24698629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 111
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr21:20575868-20575473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 171
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr21:13439844-13440365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr21:44826273-44825745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 145
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr21:24887570-24888145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 184
               

               
Conread position:
               
3-558
               

               
Cow position:
               
chr21:42500627-42501201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
4-472
               

               
Cow position:
               
chr21:42914150-42913676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 33
               

               
Conread position:
               
4-485
               

               
Cow position:
               
chr21:17411074-17410578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
4-554
               

               
Cow position:
               
chr21:28989205-28989760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 197
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr21:26852842-26853210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
5-477
               

               
Cow position:
               
chr21:21480585-21480112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 202
               

               
Conread position:
               
5-491
               

               
Cow position:
               
chr21:5455396-5454906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 213
               

               
Conread position:
               
5-530
               

               
Cow position:
               
chr21:21170352-21169821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
5-537
               

               
Cow position:
               
chr21:168052-167537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 203
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr21:33983215-33982669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 32
               

               
Conread position:
               
5-553
               

               
Cow position:
               
chr21:4079948-4080494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 202
               

               
Conread position:
               
5-553
               

               
Cow position:
               
chr21:42540627-42540076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
6-537
               

               
Cow position:
               
chr21:17144743-17145282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 205
               

               
Conread position:
               
6-554
               

               
Cow position:
               
chr21:45971550-45971027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 10
               

               
Conread position:
               
7-546
               

               
Cow position:
               
chr21:16695967-16696512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 30
               

               
Conread position:
               
7-550
               

               
Cow position:
               
chr21:1483102-1483623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 86
               

               
Conread position:
               
7-551
               

               
Cow position:
               
chr21:10514408-10514951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 199
               

               
Conread position:
               
7-553
               

               
Cow position:
               
chr21:25382594-25383172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 285
               

               
Conread position:
               
7-554
               

               
Cow position:
               
chr21:23672348-23672892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
11-547
               

               
Cow position:
               
chr21:44514867-44515404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
14-423
               

               
Cow position:
               
chr21:5344280-5344670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 33
               

               
Conread position:
               
14-531
               

               
Cow position:
               
chr21:2366944-2367456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 87
               

               
Conread position:
               
14-557
               

               
Cow position:
               
chr21:10071326-10070778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 193
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr21:27863916-27863366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 199
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr21:37706813-37706268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 138
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr21:46462796-46463150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 85
               

               
Conread position:
               
17-554
               

               
Cow position:
               
chr21:5153223-5153768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 190
               

               
Conread position:
               
17-554
               

               
Cow position:
               
chr21:28923748-28924256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
21-554
               

               
Cow position:
               
chr21:4399412-4399950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 20
               

               
Conread position:
               
22-551
               

               
Cow position:
               
chr21:26244549-26245058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 118
               

               
Conread position:
               
24-537
               

               
Cow position:
               
chr21:32191793-32192304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 52
               

               
Conread position:
               
24-551
               

               
Cow position:
               
chr21:33263464-33263988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 188
               

               
Conread position:
               
24-554
               

               
Cow position:
               
chr21:14760191-14760712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
24-554
               

               
Cow position:
               
chr21:15976255-15976779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 13
               

               
Conread position:
               
24-554
               

               
Cow position:
               
chr21:44566085-44565575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 81
               

               
Conread position:
               
24-556
               

               
Cow position:
               
chr21:35898008-35897477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 183
               

               
Conread position:
               
24-557
               

               
Cow position:
               
chr21:19766467-19767004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 183
               

               
Conread position:
               
25-508
               

               
Cow position:
               
chr21:28881763-28882239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 180
               

               
Conread position:
               
25-533
               

               
Cow position:
               
chr21:38867952-38867462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
25-554
               

               
Cow position:
               
chr21:7582290-7581758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 14
               

               
Conread position:
               
26-425
               

               
Cow position:
               
chr21:12616758-12617151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 51
               

               
Conread position:
               
26-470
               

               
Cow position:
               
chr21:18494595-18495037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 68
               

               
Conread position:
               
26-558
               

               
Cow position:
               
chr21:937667-938170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
28-445
               

               
Cow position:
               
chr21:8290026-8289601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
28-504
               

               
Cow position:
               
chr21:44108638-44109100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 94
               

               
Conread position:
               
28-548
               

               
Cow position:
               
chr21:4794838-4795361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 179
               

               
Conread position:
               
29-485
               

               
Cow position:
               
chr21:2786179-2785696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 241
               

               
Conread position:
               
32-491
               

               
Cow position:
               
chr21:16612250-16612712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 175
               

               
Conread position:
               
33-554
               

               
Cow position:
               
chr21:45916082-45915571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 173
               

               
Conread position:
               
37-535
               

               
Cow position:
               
chr21:17475445-17475947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
16, 173
               

               
Conread position:
               
39-559
               

               
Cow position:
               
chr21:32574352-32574882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 175
               

               
Conread position:
               
42-496
               

               
Cow position:
               
chr21:35061701-35062177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
42-548
               

               
Cow position:
               
chr21:19363819-19363318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 164
               

               
Conread position:
               
42-554
               

               
Cow position:
               
chr21:9415874-9416398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 120
               

               
Conread position:
               
43-481
               

               
Cow position:
               
chr21:23984651-23984206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 43
               

               
Conread position:
               
43-544
               

               
Cow position:
               
chr21:10151440-10151942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 110
               

               
Conread position:
               
43-554
               

               
Cow position:
               
chr21:45474123-45473611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 136
               

               
Conread position:
               
44-534
               

               
Cow position:
               
chr21:17370250-17369756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 169
               

               
Conread position:
               
44-553
               

               
Cow position:
               
chr21:45151998-45151482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 393
               

               
Conread position:
               
45-425
               

               
Cow position:
               
chr21:4569864-4569479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 162
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr21:23586502-23587029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 112
               

               
Conread position:
               
50-554
               

               
Cow position:
               
chr21:30990627-30990140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 31
               

               
Conread position:
               
51-554
               

               
Cow position:
               
chr21:23785656-23786178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 186
               

               
Conread position:
               
51-554
               

               
Cow position:
               
chr21:28429089-28429591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 143
               

               
Conread position:
               
52-546
               

               
Cow position:
               
chr21:30232058-30231555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 49
               

               
Conread position:
               
54-523
               

               
Cow position:
               
chr21:37479602-37480070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 139
               

               
Conread position:
               
54-562
               

               
Cow position:
               
chr21:23821813-23822312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 11
               

               
Conread position:
               
56-375
               

               
Cow position:
               
chr21:20162180-20162502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 150
               

               
Conread position:
               
59-375
               

               
Cow position:
               
chr21:28029046-28029365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 28
               

               
Conread position:
               
60-447
               

               
Cow position:
               
chr21:11759806-11759429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 21
               

               
Conread position:
               
68-553
               

               
Cow position:
               
chr21:641244-641733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 64
               

               
Conread position:
               
68-553
               

               
Cow position:
               
chr21:16188152-16187661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
69-485
               

               
Cow position:
               
chr21:5137849-5137407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 419
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr21:39061513-39061824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr21:42905705-42905297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
76-553
               

               
Cow position:
               
chr21:19196503-19196018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 131
               

               
Conread position:
               
77-554
               

               
Cow position:
               
chr21:42384172-42384655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
78-447
               

               
Cow position:
               
chr21:43402323-43401952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
241, 101
               

               
Conread position:
               
79-486
               

               
Cow position:
               
chr21:8985217-8985633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 127
               

               
Conread position:
               
79-547
               

               
Cow position:
               
chr21:5392870-5392395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 127
               

               
Conread position:
               
80-554
               

               
Cow position:
               
chr21:34010717-34010250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
81-538
               

               
Cow position:
               
chr21:24857981-24858446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 123
               

               
Conread position:
               
81-558
               

               
Cow position:
               
chr21:20045098-20044613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
82-554
               

               
Cow position:
               
chr21:20160355-20160823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 124
               

               
Conread position:
               
83-433
               

               
Cow position:
               
chr21:13954184-13954540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
83-553
               

               
Cow position:
               
chr21:38120775-38121247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 130
               

               
Conread position:
               
84-554
               

               
Cow position:
               
chr21:13718187-13717717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
116, 94
               

               
Conread position:
               
84-557
               

               
Cow position:
               
chr21:395551-396017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 123
               

               
Conread position:
               
85-545
               

               
Cow position:
               
chr21:39664697-39664260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 58
               

               
Conread position:
               
85-553
               

               
Cow position:
               
chr21:18568979-18568493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
85-554
               

               
Cow position:
               
chr21:17709502-17709968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
234, 120
               

               
Conread position:
               
87-394
               

               
Cow position:
               
chr21:17282379-17282688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 120
               

               
Conread position:
               
87-418
               

               
Cow position:
               
chr21:28993951-28993614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr21:47760454-47760914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 7
               

               
Conread position:
               
88-397
               

               
Cow position:
               
chr21:13763300-13763607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
88-548
               

               
Cow position:
               
chr21:11645309-11644825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 422
               

               
Conread position:
               
93-554
               

               
Cow position:
               
chr21:42414417-42413950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 107
               

               
Conread position:
               
93-556
               

               
Cow position:
               
chr21:41974697-41974229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 110
               

               
Conread position:
               
94-546
               

               
Cow position:
               
chr21:6833735-6834188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 113
               

               
Conread position:
               
95-554
               

               
Cow position:
               
chr21:36762733-36763208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
98-554
               

               
Cow position:
               
chr21:46849432-46848981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 88
               

               
Conread position:
               
100-360
               

               
Cow position:
               
chr21:39883757-39884010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
100-523
               

               
Cow position:
               
chr21:426481-426923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 106
               

               
Conread position:
               
100-552
               

               
Cow position:
               
chr21:40786360-40786822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 63
               

               
Conread position:
               
101-504
               

               
Cow position:
               
chr21:47802571-47802160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 11
               

               
Conread position:
               
101-548
               

               
Cow position:
               
chr21:11740442-11739979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
101-553
               

               
Cow position:
               
chr21:18850536-18850078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 218
               

               
Conread position:
               
105-537
               

               
Cow position:
               
chr21:48176523-48176950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
213, 67
               

               
Conread position:
               
108-517
               

               
Cow position:
               
chr21:24764964-24765393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 154
               

               
Conread position:
               
108-548
               

               
Cow position:
               
chr21:46263874-46264311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 85
               

               
Conread position:
               
113-551
               

               
Cow position:
               
chr21:19170208-19169763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
114-357
               

               
Cow position:
               
chr21:47745970-47745725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
205, 93
               

               
Conread position:
               
114-509
               

               
Cow position:
               
chr21:11707047-11706655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 83
               

               
Conread position:
               
115-421
               

               
Cow position:
               
chr21:12973546-12973236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
115-552
               

               
Cow position:
               
chr21:32237004-32237424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 86
               

               
Conread position:
               
115-554
               

               
Cow position:
               
chr21:13128391-13127951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
116-527
               

               
Cow position:
               
chr21:13489348-13489766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 90
               

               
Conread position:
               
116-554
               

               
Cow position:
               
chr21:28734207-28733766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 97
               

               
Conread position:
               
118-504
               

               
Cow position:
               
chr21:11639728-11640119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
118-529
               

               
Cow position:
               
chr21:10726988-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 92
               

               
Conread position:
               
121-462
               

               
Cow position:
               
chr21:40058515-40058864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
123-496
               

               
Cow position:
               
chr21:28998195-28997808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 94
               

               
Conread position:
               
123-554
               

               
Cow position:
               
chr21:2679271-2679696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
124-553
               

               
Cow position:
               
chr21:34653800-34654219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
125-443
               

               
Cow position:
               
chr21:20377648-20377338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
234, 61
               

               
Conread position:
               
126-507
               

               
Cow position:
               
chr21:12961198-12960796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
128-361
               

               
Cow position:
               
chr21:29954710-29954487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
128-554
               

               
Cow position:
               
chr21:26648287-26647868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 79
               

               
Conread position:
               
129-360
               

               
Cow position:
               
chr21:21600942-21600707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
190, 78
               

               
Conread position:
               
129-529
               

               
Cow position:
               
chr21:39889026-39888619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 78
               

               
Conread position:
               
129-562
               

               
Cow position:
               
chr21:30607385-30606931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 251
               

               
Conread position:
               
130-531
               

               
Cow position:
               
chr21:1529509-1529110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 82
               

               
Conread position:
               
130-553
               

               
Cow position:
               
chr21:25127329-25127750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr21:36793602-36793972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
132-417
               

               
Cow position:
               
chr21:42023856-42024128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 75
               

               
Conread position:
               
132-554
               

               
Cow position:
               
chr21:33562735-33563150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
134-554
               

               
Cow position:
               
chr21:17643240-17642838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
134-554
               

               
Cow position:
               
chr21:36795323-36795750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 77
               

               
Conread position:
               
134-562
               

               
Cow position:
               
chr21:43357538-43357101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
136-557
               

               
Cow position:
               
chr21:41155587-41156020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
138-418
               

               
Cow position:
               
chr21:23478989-23478710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
138-525
               

               
Cow position:
               
chr21:25282060-25281678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
175, 35
               

               
Conread position:
               
139-546
               

               
Cow position:
               
chr21:44114402-44113993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
140-487
               

               
Cow position:
               
chr21:18783954-18783606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
141-544
               

               
Cow position:
               
chr21:36857359-36857763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
145-554
               

               
Cow position:
               
chr21:14464299-14464730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
146-535
               

               
Cow position:
               
chr21:13756294-13756681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
147-553
               

               
Cow position:
               
chr21:33350481-33350887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
147-554
               

               
Cow position:
               
chr21:17722761-17723160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
311, 14
               

               
Conread position:
               
148-556
               

               
Cow position:
               
chr21:36819486-36819079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
149-554
               

               
Cow position:
               
chr21:44252090-44251696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
149-557
               

               
Cow position:
               
chr21:3585618-3585218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 62
               

               
Conread position:
               
150-552
               

               
Cow position:
               
chr21:6713800-6713378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
150-558
               

               
Cow position:
               
chr21:13035310-13034887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
151-557
               

               
Cow position:
               
chr21:21223024-21223431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
152-540
               

               
Cow position:
               
chr21:39403797-39403392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
167, 55
               

               
Conread position:
               
152-557
               

               
Cow position:
               
chr21:5971095-5970688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
184, 58
               

               
Conread position:
               
153-526
               

               
Cow position:
               
chr21:23150277-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
159-554
               

               
Cow position:
               
chr21:49700288-49699893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 48
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr21:13256544-13256770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
160-554
               

               
Cow position:
               
chr21:23322332-23321931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 55
               

               
Conread position:
               
161-447
               

               
Cow position:
               
chr21:17049342-17049625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
200, 52
               

               
Conread position:
               
162-503
               

               
Cow position:
               
chr21:19977086-19977432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
162-535
               

               
Cow position:
               
chr21:4267599-4267219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
163-532
               

               
Cow position:
               
chr21:5636969-5636595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
166-522
               

               
Cow position:
               
chr21:13410068-13409716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
166-552
               

               
Cow position:
               
chr21:29015134-29014766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
261, 43
               

               
Conread position:
               
167-360
               

               
Cow position:
               
chr21:28919867-28919673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
173-375
               

               
Cow position:
               
chr21:28907890-28907683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
174-544
               

               
Cow position:
               
chr21:19759517-19759888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
175-553
               

               
Cow position:
               
chr21:27569400-27569027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
180-554
               

               
Cow position:
               
chr21:41878245-41878616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 27
               

               
Conread position:
               
180-554
               

               
Cow position:
               
chr21:42348909-42348548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
181-425
               

               
Cow position:
               
chr21:9278138-9278395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
182-554
               

               
Cow position:
               
chr21:8351530-8351146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
185-357
               

               
Cow position:
               
chr21:11877158-11877329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
186-537
               

               
Cow position:
               
chr21:1384199-1384547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
187-553
               

               
Cow position:
               
chr21:28626017-28626383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
187-554
               

               
Cow position:
               
chr21:41597588-41597958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
189-400
               

               
Cow position:
               
chr21:24797473-24797676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
192-424
               

               
Cow position:
               
chr21:13303594-13303832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 6
               

               
Conread position:
               
193-553
               

               
Cow position:
               
chr21:10007863-10007493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr21:33791590-33791234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
200-397
               

               
Cow position:
               
chr21:34237181-34237373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 21
               

               
Conread position:
               
210-554
               

               
Cow position:
               
chr21:8235748-8235415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
212-360
               

               
Cow position:
               
chr21:29248048-29247901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
212-425
               

               
Cow position:
               
chr21:48251232-48251013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
212-468
               

               
Cow position:
               
chr21:17302578-17302316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
212-532
               

               
Cow position:
               
chr21:16503910-16503584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
212-536
               

               
Cow position:
               
chr21:47067089-47066772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
212-547
               

               
Cow position:
               
chr21:24598457-24598798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr21:8206588-8206917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr21:13585262-13584914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr21:35996969-35997318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 244
               

               
Conread position:
               
212-554
               

               
Cow position:
               
chr21:47764314-47763971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
212-557
               

               
Cow position:
               
chr21:23535511-23535859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
213-375
               

               
Cow position:
               
chr21:1510870-1511033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
213-418
               

               
Cow position:
               
chr21:28944567-28944358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 157
               

               
Conread position:
               
213-553
               

               
Cow position:
               
chr21:29484783-29485124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 11
               

               
Conread position:
               
213-556
               

               
Cow position:
               
chr21:31662257-31662616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 293
               

               
Conread position:
               
214-553
               

               
Cow position:
               
chr21:46242441-46242095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
215-398
               

               
Cow position:
               
chr21:42465630-42465820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr21:34835623-34835427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
216-478
               

               
Cow position:
               
chr21:31676300-31676572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
216-548
               

               
Cow position:
               
chr21:29002362-29002012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 296
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr21:28955322-28955645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
216-552
               

               
Cow position:
               
chr21:45355638-45355978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr21:18780170-18779830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr21:18828509-18828156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr21:1058877-1059222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr21:12801942-12801600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
217-375
               

               
Cow position:
               
chr21:37282110-37282273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
217-478
               

               
Cow position:
               
chr21:42145719-42145992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
217-548
               

               
Cow position:
               
chr21:19258627-19258959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 202
               

               
Conread position:
               
217-551
               

               
Cow position:
               
chr21:3818017-3818353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr21:33524-33866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr21:2927400-2927058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 10
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr21:3361211-3360868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr21:27521522-27521193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
217-556
               

               
Cow position:
               
chr21:17428305-17428644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
217-557
               

               
Cow position:
               
chr21:9310846-9311202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
218-383
               

               
Cow position:
               
chr21:35897289-35897454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 16
               

               
Conread position:
               
218-554
               

               
Cow position:
               
chr21:34159762-34160099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
219-554
               

               
Cow position:
               
chr21:18845212-18844865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
221-483
               

               
Cow position:
               
chr21:3047492-3047755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
221-537
               

               
Cow position:
               
chr21:20243504-20243189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
138, 96
               

               
Conread position:
               
221-549
               

               
Cow position:
               
chr21:8618080-8618406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 213
               

               
Conread position:
               
221-554
               

               
Cow position:
               
chr21:13163699-13164006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
221-558
               

               
Cow position:
               
chr21:3763931-3763592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
222-388
               

               
Cow position:
               
chr21:9334452-9334283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr21:24714460-24714667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
222-483
               

               
Cow position:
               
chr21:21077136-21077404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
222-488
               

               
Cow position:
               
chr21:35569577-35569301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
222-514
               

               
Cow position:
               
chr21:3381274-3380971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
222-547
               

               
Cow position:
               
chr21:10118360-10118699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 262
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr21:42841784-42841456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
222-550
               

               
Cow position:
               
chr21:13738378-13738696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
222-550
               

               
Cow position:
               
chr21:18940750-18940437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
222-551
               

               
Cow position:
               
chr21:34565406-34565071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 164
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr21:23568015-23568374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr21:24094937-24094614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr21:31253342-31253679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 225
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr21:42135817-42135470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 281
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr21:1591358-1591701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr21:45330133-45329803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
222-557
               

               
Cow position:
               
chr21:7709972-7710312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
222-557
               

               
Cow position:
               
chr21:19083793-19083437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
222-557
               

               
Cow position:
               
chr21:38449645-38449299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 281
               

               
Conread position:
               
222-557
               

               
Cow position:
               
chr21:40133962-40134307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 229
               

               
Conread position:
               
222-557
               

               
Cow position:
               
chr21:41620926-41621275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 281
               

               
Conread position:
               
223-425
               

               
Cow position:
               
chr21:9998913-9998703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
223-501
               

               
Cow position:
               
chr21:28443571-28443276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
223-548
               

               
Cow position:
               
chr21:10601560-10601233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
204, 26
               

               
Conread position:
               
223-548
               

               
Cow position:
               
chr21:33727653-33727318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
223-553
               

               
Cow position:
               
chr21:17193952-17193603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 283
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr21:45330800-45330460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 279
               

               
Conread position:
               
223-557
               

               
Cow position:
               
chr21:18942021-18941685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
224-418
               

               
Cow position:
               
chr21:40065506-40065307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
224-426
               

               
Cow position:
               
chr21:8648039-8648252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
224-507
               

               
Cow position:
               
chr21:31277630-31277910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
224-508
               

               
Cow position:
               
chr21:12981928-12981639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 63
               

               
Conread position:
               
224-547
               

               
Cow position:
               
chr21:32559545-32559225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr21:5426755-5427087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
225-548
               

               
Cow position:
               
chr21:13365151-13365483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
226-496
               

               
Cow position:
               
chr21:3813672-3813393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 182
               

               
Conread position:
               
226-544
               

               
Cow position:
               
chr21:22860813-22861138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
226-550
               

               
Cow position:
               
chr21:22353419-22353094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
226-557
               

               
Cow position:
               
chr21:14452041-14452384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
227-504
               

               
Cow position:
               
chr21:6102457-6102164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 176
               

               
Conread position:
               
227-534
               

               
Cow position:
               
chr21:47730207-47729894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 262
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr21:40589671-40589335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
228-412
               

               
Cow position:
               
chr21:4268686-4268877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
228-553
               

               
Cow position:
               
chr21:28027616-28027942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 204
               

               
Conread position:
               
228-561
               

               
Cow position:
               
chr21:15610967-15611294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
230-549
               

               
Cow position:
               
chr21:9990329-9990652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
230-553
               

               
Cow position:
               
chr21:47215366-47215049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
231-547
               

               
Cow position:
               
chr21:28190844-28191172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 169
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr21:802476-802176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
234-496
               

               
Cow position:
               
chr21:39450349-39450069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
234-537
               

               
Cow position:
               
chr21:13488338-13488657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
85, 105
               

               
Conread position:
               
234-539
               

               
Cow position:
               
chr21:46143762-46144091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr21:15911219-15911547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 264
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr21:18842419-18842090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
84, 144
               

               
Conread position:
               
235-415
               

               
Cow position:
               
chr21:45375436-45375626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
235-550
               

               
Cow position:
               
chr21:17183741-17184060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
239-548
               

               
Cow position:
               
chr21:30592479-30592168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr21:18790732-18790419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 237
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr21:37345278-37344954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 240
               

               
Conread position:
               
240-549
               

               
Cow position:
               
chr21:22194286-22193955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
240-553
               

               
Cow position:
               
chr21:41198586-41198253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 268
               

               
Conread position:
               
240-554
               

               
Cow position:
               
chr21:32339912-32339593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 207
               

               
Conread position:
               
241-553
               

               
Cow position:
               
chr21:13754628-13754932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
205, 41
               

               
Conread position:
               
242-424
               

               
Cow position:
               
chr21:10608629-10608439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
242-504
               

               
Cow position:
               
chr21:9872794-9873056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
243-513
               

               
Cow position:
               
chr21:37361640-37361373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 83
               

               
Conread position:
               
243-539
               

               
Cow position:
               
chr21:47861022-47861324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 251
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr21:21169667-21169349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr21:27146164-27145846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 254
               

               
Conread position:
               
245-554
               

               
Cow position:
               
chr21:25800238-25800546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
247-540
               

               
Cow position:
               
chr21:46860270-46859989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
247-554
               

               
Cow position:
               
chr21:10000912-10001222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
249-508
               

               
Cow position:
               
chr21:6765714-6765965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
249-557
               

               
Cow position:
               
chr21:9028454-9028766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 188
               

               
Conread position:
               
251-548
               

               
Cow position:
               
chr21:18800693-18800393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 160
               

               
Conread position:
               
253-554
               

               
Cow position:
               
chr21:10114491-10114187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
254-540
               

               
Cow position:
               
chr21:18065085-18064781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
66, 163
               

               
Conread position:
               
254-554
               

               
Cow position:
               
chr21:27624551-27624845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
255-535
               

               
Cow position:
               
chr21:32454741-32455032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
255-554
               

               
Cow position:
               
chr21:28244315-28244617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 75
               

               
Conread position:
               
256-391
               

               
Cow position:
               
chr21:43631362-43631219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
256-553
               

               
Cow position:
               
chr21:41590716-41590419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
257-558
               

               
Cow position:
               
chr21:13840164-13840476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
258-510
               

               
Cow position:
               
chr21:45439407-45439133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 253
               

               
Conread position:
               
259-491
               

               
Cow position:
               
chr21:31511137-31511360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
259-554
               

               
Cow position:
               
chr21:45921215-45920911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 238
               

               
Conread position:
               
260-554
               

               
Cow position:
               
chr21:10633796-10633493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 241
               

               
Conread position:
               
261-540
               

               
Cow position:
               
chr21:24642364-24642653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 239
               

               
Conread position:
               
263-557
               

               
Cow position:
               
chr21:9301056-9301373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
265-530
               

               
Cow position:
               
chr21:11456960-11456686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 227
               

               
Conread position:
               
265-553
               

               
Cow position:
               
chr21:12749375-12749093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 108
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr21:10823403-10823706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 225
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr21:46607734-46607443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
269-517
               

               
Cow position:
               
chr21:18041989-18041737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
157, 41
               

               
Conread position:
               
269-554
               

               
Cow position:
               
chr21:10005032-10004739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
270-554
               

               
Cow position:
               
chr21:957521-957819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 120
               

               
Conread position:
               
270-557
               

               
Cow position:
               
chr21:19673669-19673956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
271-540
               

               
Cow position:
               
chr21:35354393-35354664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
271-547
               

               
Cow position:
               
chr21:7825320-7825052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
272-554
               

               
Cow position:
               
chr21:42007603-42007315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
273-562
               

               
Cow position:
               
chr21:11359894-11360191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
276-548
               

               
Cow position:
               
chr21:12462110-12461825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 225
               

               
Conread position:
               
277-486
               

               
Cow position:
               
chr21:12640195-12640409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
277-491
               

               
Cow position:
               
chr21:2293854-2294068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
277-534
               

               
Cow position:
               
chr21:48234297-48234039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
277-553
               

               
Cow position:
               
chr21:17637760-17638038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
277-554
               

               
Cow position:
               
chr21:11250727-11251016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
42, 172
               

               
Conread position:
               
278-482
               

               
Cow position:
               
chr21:39809762-39809971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
278-553
               

               
Cow position:
               
chr21:20152810-20153102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 228
               

               
Conread position:
               
283-554
               

               
Cow position:
               
chr21:46906-47187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
39, 216
               

               
Conread position:
               
285-551
               

               
Cow position:
               
chr21:10538393-10538111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
21, 183
               

               
Conread position:
               
286-553
               

               
Cow position:
               
chr21:20260450-20260173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 211
               

               
Conread position:
               
287-477
               

               
Cow position:
               
chr21:4568160-4568357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
287-556
               

               
Cow position:
               
chr21:20192774-20193043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
288-553
               

               
Cow position:
               
chr21:27668884-27669159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 210
               

               
Conread position:
               
290-437
               

               
Cow position:
               
chr21:949794-949647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
292-537
               

               
Cow position:
               
chr21:11198271-11198018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
292-554
               

               
Cow position:
               
chr21:2657696-2657956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
296-547
               

               
Cow position:
               
chr21:22465082-22465331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
107, 143
               

               
Conread position:
               
297-538
               

               
Cow position:
               
chr21:18414936-18415183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
297-553
               

               
Cow position:
               
chr21:27810295-27810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
297-554
               

               
Cow position:
               
chr21:8451776-8452052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
297-554
               

               
Cow position:
               
chr21:30835246-30835510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 199
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr21:21077489-21077747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr21:29978871-29978613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
299-548
               

               
Cow position:
               
chr21:30222234-30222486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
299-553
               

               
Cow position:
               
chr21:12723049-12723297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr21:6624047-6624304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr21:9477051-9477313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
301-557
               

               
Cow position:
               
chr21:12301617-12301361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
302-556
               

               
Cow position:
               
chr21:25629025-25628761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 198
               

               
Conread position:
               
302-557
               

               
Cow position:
               
chr21:12916534-12916271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
303-536
               

               
Cow position:
               
chr21:37349887-37350123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
303-552
               

               
Cow position:
               
chr21:10561692-10561438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
124, 191
               

               
Conread position:
               
303-554
               

               
Cow position:
               
chr21:10673024-10673267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
303-557
               

               
Cow position:
               
chr21:17560037-17559773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
304-553
               

               
Cow position:
               
chr21:16914669-16914924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
304-554
               

               
Cow position:
               
chr21:2260465-2260219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
308-480
               

               
Cow position:
               
chr21:9980067-9979895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
117, 49
               

               
Conread position:
               
308-491
               

               
Cow position:
               
chr21:29224965-29224773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
308-554
               

               
Cow position:
               
chr21:6997835-6998094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
308-554
               

               
Cow position:
               
chr21:34151477-34151732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
59, 192
               

               
Conread position:
               
312-502
               

               
Cow position:
               
chr21:19210612-19210809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 184
               

               
Conread position:
               
312-558
               

               
Cow position:
               
chr21:10979043-10978798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
316-510
               

               
Cow position:
               
chr21:8527572-8527381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
317-503
               

               
Cow position:
               
chr21:5985412-5985222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
317-533
               

               
Cow position:
               
chr21:17856453-17856670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
317-533
               

               
Cow position:
               
chr21:38664544-38664765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
317-545
               

               
Cow position:
               
chr21:22121428-22121643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
317-548
               

               
Cow position:
               
chr21:30250284-30250063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
317-549
               

               
Cow position:
               
chr21:36789703-36789937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
317-551
               

               
Cow position:
               
chr21:20418779-20418538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 179
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr21:17008887-17009127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr21:18155664-18155420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr21:37790096-37789853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr21:38728071-38728300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr21:42022196-42022422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr21:17875286-17875043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr21:23980276-23980032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
318-552
               

               
Cow position:
               
chr21:21686324-21686562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
319-545
               

               
Cow position:
               
chr21:13713932-13713698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 158
               

               
Conread position:
               
320-548
               

               
Cow position:
               
chr21:31090511-31090294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
320-553
               

               
Cow position:
               
chr21:9698177-9697934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 180
               

               
Conread position:
               
321-533
               

               
Cow position:
               
chr21:33360122-33359917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
322-551
               

               
Cow position:
               
chr21:22210333-22210102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
322-562
               

               
Cow position:
               
chr21:30236906-30236680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
105, 99
               

               
Conread position:
               
324-547
               

               
Cow position:
               
chr21:44214037-44214266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 172
               

               
Conread position:
               
327-549
               

               
Cow position:
               
chr21:6017532-6017767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 175
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr21:41107846-41107615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
330-525
               

               
Cow position:
               
chr21:37014484-37014288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr21:10858735-10858953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr21:16152350-16152587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 168
               

               
Conread position:
               
331-559
               

               
Cow position:
               
chr21:40432368-40432597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
332-553
               

               
Cow position:
               
chr21:46140962-46141194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
332-554
               

               
Cow position:
               
chr21:7823298-7823508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
332-554
               

               
Cow position:
               
chr21:10410139-10410369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
334-554
               

               
Cow position:
               
chr21:46552183-46551956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
335-548
               

               
Cow position:
               
chr21:16569825-16570042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 158
               

               
Conread position:
               
335-557
               

               
Cow position:
               
chr21:36909858-36910081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
337-548
               

               
Cow position:
               
chr21:45262886-45262669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 160
               

               
Conread position:
               
337-553
               

               
Cow position:
               
chr21:24343339-24343121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
339-554
               

               
Cow position:
               
chr21:1511219-1511436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
339-554
               

               
Cow position:
               
chr21:15544290-15544082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 136
               

               
Conread position:
               
339-554
               

               
Cow position:
               
chr21:40266049-40266268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
342-549
               

               
Cow position:
               
chr21:7377998-7377784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
343-540
               

               
Cow position:
               
chr21:28919592-28919390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
344-537
               

               
Cow position:
               
chr21:7394314-7394510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
344-544
               

               
Cow position:
               
chr21:17929909-17929700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
346-557
               

               
Cow position:
               
chr21:41140783-41140568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
347-554
               

               
Cow position:
               
chr21:11779594-11779395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
348-554
               

               
Cow position:
               
chr21:5464684-5464895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
348-557
               

               
Cow position:
               
chr21:6758283-6758493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
351-549
               

               
Cow position:
               
chr21:9707333-9707129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 143
               

               
Conread position:
               
352-548
               

               
Cow position:
               
chr21:297694-297895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
354-553
               

               
Cow position:
               
chr21:868982-868778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
356-531
               

               
Cow position:
               
chr21:9302482-9302303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
357-556
               

               
Cow position:
               
chr21:37235328-37235534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr21:36910687-36910891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
363-482
               

               
Cow position:
               
chr21:7391324-7391200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
363-552
               

               
Cow position:
               
chr21:47363786-47363589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr21:47714051-47713861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
363-556
               

               
Cow position:
               
chr21:19060135-19059944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
363-558
               

               
Cow position:
               
chr21:17890255-17890453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 130
               

               
Conread position:
               
364-520
               

               
Cow position:
               
chr21:19513818-19513978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
364-552
               

               
Cow position:
               
chr21:21907476-21907289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
364-561
               

               
Cow position:
               
chr21:977191-976993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
367-554
               

               
Cow position:
               
chr21:22014143-22014337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
369-551
               

               
Cow position:
               
chr21:43259181-43259363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
371-550
               

               
Cow position:
               
chr21:471637-471818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
372-554
               

               
Cow position:
               
chr21:42209669-42209482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
379-554
               

               
Cow position:
               
chr21:734564-734736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
382-554
               

               
Cow position:
               
chr21:31159373-31159544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
385-554
               

               
Cow position:
               
chr21:38720226-38720396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
393-554
               

               
Cow position:
               
chr21:17062919-17063068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
396-547
               

               
Cow position:
               
chr21:44724380-44724226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
400-554
               

               
Cow position:
               
chr21:29405226-29405074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
402-554
               

               
Cow position:
               
chr21:7768425-7768585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
407-554
               

               
Cow position:
               
chr21:46132571-46132721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chr21:1764844-1764714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
427-550
               

               
Cow position:
               
chr21:17695640-17695523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
428-554
               

               
Cow position:
               
chr21:41287773-41287646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
434-542
               

               
Cow position:
               
chr21:41610197-41610302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
436-554
               

               
Cow position:
               
chr21:12207771-12207655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.