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Cow genome map

           
Conread name:
           
Pig2-108K12
        

               
Conread position:
               
1-357
               

               
Cow position:
               
chr23:2802766-2802408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 91
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr23:2791035-2790650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 157
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr23:20185271-20184875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr23:26741923-26741518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 207
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr23:16610288-16609860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 212
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr23:1430272-1429848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 390
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr23:37191056-37190608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
18, 218
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr23:31353875-31354330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr23:14191079-14191570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 205
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr23:18367219-18367716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 217
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr23:1321659-1321189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 36
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr23:2370898-2371394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 216
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr23:3209086-3208591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 49
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr23:30663096-30662596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 206
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr23:1670445-1670938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr23:9595300-9594781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 36
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr23:4608866-4608324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 175
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr23:1959867-1960404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 92
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr23:22143286-22142742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr23:27402874-27403412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 205
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr23:29447520-29446977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 208
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr23:36027512-36026974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 100
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr23:29625958-29626487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 109
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr23:2180122-2179585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr23:9268117-9268659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 213
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr23:25669527-25669010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 39
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr23:26318950-26319479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 35
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr23:31493412-31493944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 184
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr23:39806393-39806949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 37
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr23:1721474-1720902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 323
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr23:1254208-1254770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 72
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr23:39775238-39775809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 276
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr23:19002546-19001985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 216
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr23:20435535-20434980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 211
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr23:7392742-7392220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 36
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr23:11473977-11473419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 120
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr23:26986752-26986187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:344647-344102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 192
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:1398503-1397953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 23
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:6593188-6592622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 267
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:10014075-10014615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:13511265-13511811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 46
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:13598882-13599426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 163
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:14839224-14838659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 229
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:15710551-15709986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 209
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:18322879-18322341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:19636730-19636176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:19753421-19752852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:20389133-20388565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:25865159-25864611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 207
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:36308945-36309506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 145
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr23:8697974-8698508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 203
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr23:10852583-10853134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 201
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr23:21789243-21788678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 209
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr23:25676134-25675609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 33
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr23:13519986-13520541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 206
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr23:39028323-39028798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 210
               

               
Conread position:
               
2-536
               

               
Cow position:
               
chr23:4293174-4293714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr23:416693-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 217
               

               
Conread position:
               
2-547
               

               
Cow position:
               
chr23:7844818-7845372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
2-552
               

               
Cow position:
               
chr23:11844832-11845360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
2-552
               

               
Cow position:
               
chr23:22804258-22804808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 110
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr23:1647149-1647701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 75
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr23:22530871-22530353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 14
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr23:10554482-10553921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 209
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr23:3167773-3168145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr23:1640341-1640758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 207
               

               
Conread position:
               
3-485
               

               
Cow position:
               
chr23:41285469-41285938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr23:1337761-1337235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
3-547
               

               
Cow position:
               
chr23:8911009-8911541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 159
               

               
Conread position:
               
3-554
               

               
Cow position:
               
chr23:40861884-40862431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr23:11564826-11564387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr23:221607-222021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 107
               

               
Conread position:
               
5-544
               

               
Cow position:
               
chr23:39049878-39049363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr23:32309213-32309771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 202
               

               
Conread position:
               
7-417
               

               
Cow position:
               
chr23:4437354-4437767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 114
               

               
Conread position:
               
7-555
               

               
Cow position:
               
chr23:18802739-18802183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 203
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr23:18371378-18371015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
84, 129
               

               
Conread position:
               
8-468
               

               
Cow position:
               
chr23:406621-406170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 93
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr23:6720742-6720242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
8-548
               

               
Cow position:
               
chr23:1289837-1290377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
8-552
               

               
Cow position:
               
chr23:5870643-5870109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
8-556
               

               
Cow position:
               
chr23:1924302-1923749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
9-537
               

               
Cow position:
               
chr23:34315432-34314885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 204
               

               
Conread position:
               
12-554
               

               
Cow position:
               
chr23:7596789-7596268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
15-503
               

               
Cow position:
               
chr23:16665026-16664535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 296
               

               
Conread position:
               
15-537
               

               
Cow position:
               
chr23:25562584-25562056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 192
               

               
Conread position:
               
17-554
               

               
Cow position:
               
chr23:1535865-1536405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 211
               

               
Conread position:
               
18-544
               

               
Cow position:
               
chr23:40633632-40633095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 29
               

               
Conread position:
               
19-544
               

               
Cow position:
               
chr23:7835947-7835409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 82
               

               
Conread position:
               
20-548
               

               
Cow position:
               
chr23:27564147-27563621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 137
               

               
Conread position:
               
24-485
               

               
Cow position:
               
chr23:5151530-5152012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 136
               

               
Conread position:
               
24-558
               

               
Cow position:
               
chr23:3727847-3727295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 77
               

               
Conread position:
               
25-553
               

               
Cow position:
               
chr23:8005804-8006328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
25-554
               

               
Cow position:
               
chr23:11128785-11129319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 143
               

               
Conread position:
               
31-553
               

               
Cow position:
               
chr23:1700481-1700976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 54
               

               
Conread position:
               
31-557
               

               
Cow position:
               
chr23:41220692-41220128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
37-402
               

               
Cow position:
               
chr23:14896230-14895871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
282, 76
               

               
Conread position:
               
37-553
               

               
Cow position:
               
chr23:533790-534312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 178
               

               
Conread position:
               
38-394
               

               
Cow position:
               
chr23:24504808-24505171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 179
               

               
Conread position:
               
38-553
               

               
Cow position:
               
chr23:20745024-20744508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 173
               

               
Conread position:
               
42-525
               

               
Cow position:
               
chr23:4579469-4578982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 166
               

               
Conread position:
               
43-547
               

               
Cow position:
               
chr23:18698457-18697947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
44-354
               

               
Cow position:
               
chr23:778392-778076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 153
               

               
Conread position:
               
45-554
               

               
Cow position:
               
chr23:34347907-34348401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
50-534
               

               
Cow position:
               
chr23:41472192-41472687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 146
               

               
Conread position:
               
51-472
               

               
Cow position:
               
chr23:32961805-32961357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 210
               

               
Conread position:
               
52-405
               

               
Cow position:
               
chr23:28118519-28118167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 13
               

               
Conread position:
               
52-423
               

               
Cow position:
               
chr23:361338-360965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
52-544
               

               
Cow position:
               
chr23:7175202-7175686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 156
               

               
Conread position:
               
54-551
               

               
Cow position:
               
chr23:21336909-21336401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
55-418
               

               
Cow position:
               
chr23:39793035-39793396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
57-553
               

               
Cow position:
               
chr23:2502279-2501769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
67-553
               

               
Cow position:
               
chr23:4980934-4980462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 66
               

               
Conread position:
               
73-360
               

               
Cow position:
               
chr23:25883280-25883567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
246, 68
               

               
Conread position:
               
76-548
               

               
Cow position:
               
chr23:3394904-3394416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 187
               

               
Conread position:
               
76-554
               

               
Cow position:
               
chr23:24866909-24867395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 103
               

               
Conread position:
               
77-554
               

               
Cow position:
               
chr23:4996479-4996014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 9
               

               
Conread position:
               
77-555
               

               
Cow position:
               
chr23:34416173-34416648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 131
               

               
Conread position:
               
79-544
               

               
Cow position:
               
chr23:40777869-40778340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 128
               

               
Conread position:
               
79-554
               

               
Cow position:
               
chr23:22298414-22297953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
81-557
               

               
Cow position:
               
chr23:11380670-11380162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 469
               

               
Conread position:
               
82-405
               

               
Cow position:
               
chr23:23470559-23470874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
83-554
               

               
Cow position:
               
chr23:11434657-11434175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 182
               

               
Conread position:
               
84-468
               

               
Cow position:
               
chr23:37992607-37992983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 123
               

               
Conread position:
               
84-537
               

               
Cow position:
               
chr23:30622582-30622119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
84-552
               

               
Cow position:
               
chr23:14739064-14739532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 106
               

               
Conread position:
               
86-417
               

               
Cow position:
               
chr23:14862817-14862498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
301, 84
               

               
Conread position:
               
87-542
               

               
Cow position:
               
chr23:7429061-7429527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
88-486
               

               
Cow position:
               
chr23:27861957-27862349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
98-554
               

               
Cow position:
               
chr23:33601895-33601451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 108
               

               
Conread position:
               
101-505
               

               
Cow position:
               
chr23:479156-479567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
103-552
               

               
Cow position:
               
chr23:14164773-14164311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
106-562
               

               
Cow position:
               
chr23:24509336-24509788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 107
               

               
Conread position:
               
108-381
               

               
Cow position:
               
chr23:9235429-9235163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr23:40780968-40781409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 97
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr23:38455544-38455093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
114-360
               

               
Cow position:
               
chr23:15003646-15003887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
180, 57
               

               
Conread position:
               
114-479
               

               
Cow position:
               
chr23:353937-353577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 92
               

               
Conread position:
               
114-554
               

               
Cow position:
               
chr23:9734061-9734494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 9
               

               
Conread position:
               
116-537
               

               
Cow position:
               
chr23:7402349-7402769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 91
               

               
Conread position:
               
119-553
               

               
Cow position:
               
chr23:1883039-1883480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 88
               

               
Conread position:
               
123-554
               

               
Cow position:
               
chr23:4529242-4528791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 83
               

               
Conread position:
               
124-554
               

               
Cow position:
               
chr23:34356309-34356726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 81
               

               
Conread position:
               
127-548
               

               
Cow position:
               
chr23:5162081-5162509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
128-370
               

               
Cow position:
               
chr23:35369355-35369114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
193, 82
               

               
Conread position:
               
129-400
               

               
Cow position:
               
chr23:29824408-29824135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
188, 75
               

               
Conread position:
               
129-412
               

               
Cow position:
               
chr23:13514837-13515112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
132-404
               

               
Cow position:
               
chr23:12896948-12896671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
133-554
               

               
Cow position:
               
chr23:37065501-37065935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 28
               

               
Conread position:
               
134-548
               

               
Cow position:
               
chr23:39778077-39778481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 74
               

               
Conread position:
               
135-537
               

               
Cow position:
               
chr23:39255083-39254676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
135-552
               

               
Cow position:
               
chr23:2799232-2799664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 18
               

               
Conread position:
               
136-551
               

               
Cow position:
               
chr23:39752777-39753197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 71
               

               
Conread position:
               
137-552
               

               
Cow position:
               
chr23:6995302-6994899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
139-547
               

               
Cow position:
               
chr23:4968864-4968445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
149-412
               

               
Cow position:
               
chr23:38414299-38414023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
150-548
               

               
Cow position:
               
chr23:1905705-1906123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
151-554
               

               
Cow position:
               
chr23:21445785-21446202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
152-507
               

               
Cow position:
               
chr23:39309435-39309071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 52
               

               
Conread position:
               
154-554
               

               
Cow position:
               
chr23:4972468-4972851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
136, 25
               

               
Conread position:
               
154-554
               

               
Cow position:
               
chr23:16700367-16699956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
154-555
               

               
Cow position:
               
chr23:10085499-10085099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
168, 39
               

               
Conread position:
               
160-485
               

               
Cow position:
               
chr23:587083-587411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
162-414
               

               
Cow position:
               
chr23:1610531-1610795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
163-546
               

               
Cow position:
               
chr23:16563533-16563916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
167-410
               

               
Cow position:
               
chr23:1545909-1546148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
167-554
               

               
Cow position:
               
chr23:3247285-3247674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
167-554
               

               
Cow position:
               
chr23:22660872-22660501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
169-554
               

               
Cow position:
               
chr23:29459398-29459013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
171-554
               

               
Cow position:
               
chr23:31970822-31970452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
252, 36
               

               
Conread position:
               
174-551
               

               
Cow position:
               
chr23:4726503-4726876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 32
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr23:35366396-35366202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr23:31601750-31601366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
182-552
               

               
Cow position:
               
chr23:20171288-20171664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
187-554
               

               
Cow position:
               
chr23:35363057-35362693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
132, 24
               

               
Conread position:
               
193-418
               

               
Cow position:
               
chr23:12408798-12408564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 218
               

               
Conread position:
               
194-481
               

               
Cow position:
               
chr23:33233184-33232893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
194-553
               

               
Cow position:
               
chr23:2316527-2316872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
198-554
               

               
Cow position:
               
chr23:38208435-38208811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
201-554
               

               
Cow position:
               
chr23:29346034-29345683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
212-474
               

               
Cow position:
               
chr23:19538260-19537986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
212-482
               

               
Cow position:
               
chr23:25531709-25531447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
212-484
               

               
Cow position:
               
chr23:29242680-29242967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
212-557
               

               
Cow position:
               
chr23:186907-187267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
214-554
               

               
Cow position:
               
chr23:5617315-5617659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
216-392
               

               
Cow position:
               
chr23:29742122-29742303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
216-483
               

               
Cow position:
               
chr23:22588532-22588257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 215
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr23:1803534-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
216-510
               

               
Cow position:
               
chr23:9652727-9652442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 9
               

               
Conread position:
               
216-551
               

               
Cow position:
               
chr23:26948928-26949279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 241
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr23:3262761-3262412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 285
               

               
Conread position:
               
217-426
               

               
Cow position:
               
chr23:36199032-36199244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
6, 152
               

               
Conread position:
               
217-433
               

               
Cow position:
               
chr23:1690527-1690752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
217-492
               

               
Cow position:
               
chr23:4338867-4338586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 198
               

               
Conread position:
               
217-540
               

               
Cow position:
               
chr23:16881416-16881091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
217-551
               

               
Cow position:
               
chr23:20195179-20194842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 122
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr23:3140604-3140935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 165
               

               
Conread position:
               
219-421
               

               
Cow position:
               
chr23:2259855-2259647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
220-540
               

               
Cow position:
               
chr23:38503383-38503030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
220-554
               

               
Cow position:
               
chr23:37224323-37223988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 168
               

               
Conread position:
               
222-360
               

               
Cow position:
               
chr23:39899137-39899274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
222-479
               

               
Cow position:
               
chr23:38854989-38854722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
222-482
               

               
Cow position:
               
chr23:808907-809180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
222-508
               

               
Cow position:
               
chr23:20057122-20056824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 279
               

               
Conread position:
               
222-542
               

               
Cow position:
               
chr23:26632545-26632882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
222-544
               

               
Cow position:
               
chr23:8293246-8293577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
97, 135
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr23:1878126-1877816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
97, 166
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr23:3967802-3967480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr23:6244842-6244517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 163
               

               
Conread position:
               
222-549
               

               
Cow position:
               
chr23:26779915-26779594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 86
               

               
Conread position:
               
222-553
               

               
Cow position:
               
chr23:21452988-21452645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 277
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr23:11315272-11314948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 94
               

               
Conread position:
               
222-562
               

               
Cow position:
               
chr23:25358476-25358818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
223-396
               

               
Cow position:
               
chr23:5395679-5395499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
96, 155
               

               
Conread position:
               
223-494
               

               
Cow position:
               
chr23:19979202-19978927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
223-547
               

               
Cow position:
               
chr23:2282428-2282103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 59
               

               
Conread position:
               
223-552
               

               
Cow position:
               
chr23:4810496-4810824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 220
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr23:15287388-15287051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 192
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr23:41590163-41589837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
223-558
               

               
Cow position:
               
chr23:16583163-16582820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 96
               

               
Conread position:
               
224-405
               

               
Cow position:
               
chr23:6172915-6172732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 169
               

               
Conread position:
               
224-552
               

               
Cow position:
               
chr23:29034060-29034398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 277
               

               
Conread position:
               
225-554
               

               
Cow position:
               
chr23:33940408-33940072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
227-548
               

               
Cow position:
               
chr23:9599252-9599573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
213, 89
               

               
Conread position:
               
227-551
               

               
Cow position:
               
chr23:13555678-13555357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 144
               

               
Conread position:
               
227-562
               

               
Cow position:
               
chr23:2417206-2417546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
228-551
               

               
Cow position:
               
chr23:670370-670703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 158
               

               
Conread position:
               
228-554
               

               
Cow position:
               
chr23:16237509-16237171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 253
               

               
Conread position:
               
228-554
               

               
Cow position:
               
chr23:28721448-28721150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
228-557
               

               
Cow position:
               
chr23:16037766-16037444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
229-416
               

               
Cow position:
               
chr23:41348896-41348701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
229-551
               

               
Cow position:
               
chr23:15872949-15872610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 276
               

               
Conread position:
               
229-554
               

               
Cow position:
               
chr23:18402534-18402204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 96
               

               
Conread position:
               
232-553
               

               
Cow position:
               
chr23:5706754-5707078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 221
               

               
Conread position:
               
234-413
               

               
Cow position:
               
chr23:6767649-6767831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
85, 5
               

               
Conread position:
               
234-522
               

               
Cow position:
               
chr23:2055459-2055758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 263
               

               
Conread position:
               
235-552
               

               
Cow position:
               
chr23:1885418-1885089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 264
               

               
Conread position:
               
235-553
               

               
Cow position:
               
chr23:5539937-5540232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
236-530
               

               
Cow position:
               
chr23:36076062-36075749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
237-554
               

               
Cow position:
               
chr23:27544592-27544913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 255
               

               
Conread position:
               
237-554
               

               
Cow position:
               
chr23:30307668-30307993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
239-453
               

               
Cow position:
               
chr23:21343488-21343268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 131
               

               
Conread position:
               
239-547
               

               
Cow position:
               
chr23:11068983-11069292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
240-418
               

               
Cow position:
               
chr23:3910243-3910057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
240-537
               

               
Cow position:
               
chr23:29521232-29521541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
79, 144
               

               
Conread position:
               
240-547
               

               
Cow position:
               
chr23:10868524-10868844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
183, 96
               

               
Conread position:
               
240-557
               

               
Cow position:
               
chr23:33711531-33711849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
242-426
               

               
Cow position:
               
chr23:4523210-4523024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
242-539
               

               
Cow position:
               
chr23:24704040-24704355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
18, 265
               

               
Conread position:
               
242-554
               

               
Cow position:
               
chr23:10416658-10416335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 260
               

               
Conread position:
               
242-557
               

               
Cow position:
               
chr23:12050130-12050445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 171
               

               
Conread position:
               
243-448
               

               
Cow position:
               
chr23:11080847-11081055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 104
               

               
Conread position:
               
243-484
               

               
Cow position:
               
chr23:35254472-35254227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
243-536
               

               
Cow position:
               
chr23:32105638-32105946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
243-540
               

               
Cow position:
               
chr23:6367371-6367682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
243-546
               

               
Cow position:
               
chr23:33717778-33717464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
76, 256
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr23:5603505-5603199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
203, 120
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr23:15742865-15743176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
244-539
               

               
Cow position:
               
chr23:22396679-22396373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
67, 161
               

               
Conread position:
               
244-554
               

               
Cow position:
               
chr23:25378422-25378732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
245-374
               

               
Cow position:
               
chr23:10876197-10876329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
246-517
               

               
Cow position:
               
chr23:7484848-7485119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
246-524
               

               
Cow position:
               
chr23:36726147-36725869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
246-547
               

               
Cow position:
               
chr23:17404619-17404918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
181, 56
               

               
Conread position:
               
246-554
               

               
Cow position:
               
chr23:4562652-4562971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
246-556
               

               
Cow position:
               
chr23:40891130-40891450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
252-415
               

               
Cow position:
               
chr23:31739634-31739801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
252-554
               

               
Cow position:
               
chr23:5723318-5723623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 248
               

               
Conread position:
               
253-421
               

               
Cow position:
               
chr23:4421201-4421034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
254-503
               

               
Cow position:
               
chr23:3955196-3955454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
254-553
               

               
Cow position:
               
chr23:20558082-20557760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 260
               

               
Conread position:
               
255-553
               

               
Cow position:
               
chr23:16690284-16689983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
258-548
               

               
Cow position:
               
chr23:1489837-1490120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
259-486
               

               
Cow position:
               
chr23:1068531-1068296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
260-546
               

               
Cow position:
               
chr23:29801215-29801514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 217
               

               
Conread position:
               
260-551
               

               
Cow position:
               
chr23:20996255-20996542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
264-557
               

               
Cow position:
               
chr23:40789772-40790060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
265-535
               

               
Cow position:
               
chr23:21764705-21764989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 242
               

               
Conread position:
               
265-547
               

               
Cow position:
               
chr23:18902263-18901976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 231
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr23:18296595-18296892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 218
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr23:40648940-40648646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
266-554
               

               
Cow position:
               
chr23:22399190-22399491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
267-554
               

               
Cow position:
               
chr23:1742147-1742439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
267-554
               

               
Cow position:
               
chr23:23409536-23409818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
268-491
               

               
Cow position:
               
chr23:1776840-1776610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 227
               

               
Conread position:
               
270-485
               

               
Cow position:
               
chr23:4942310-4942092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
157, 59
               

               
Conread position:
               
272-553
               

               
Cow position:
               
chr23:4646308-4646595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 216
               

               
Conread position:
               
272-553
               

               
Cow position:
               
chr23:24930278-24929987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
272-554
               

               
Cow position:
               
chr23:3191329-3191039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 226
               

               
Conread position:
               
273-517
               

               
Cow position:
               
chr23:1636078-1636326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 195
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chr23:5191332-5191496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
277-537
               

               
Cow position:
               
chr23:36017942-36018219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 230
               

               
Conread position:
               
277-549
               

               
Cow position:
               
chr23:19227482-19227755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
277-553
               

               
Cow position:
               
chr23:16631064-16631354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
278-549
               

               
Cow position:
               
chr23:1189101-1188832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
279-553
               

               
Cow position:
               
chr23:29786551-29786261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 226
               

               
Conread position:
               
279-554
               

               
Cow position:
               
chr23:30999377-30999650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 202
               

               
Conread position:
               
280-554
               

               
Cow position:
               
chr23:38973649-38973933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 222
               

               
Conread position:
               
285-554
               

               
Cow position:
               
chr23:19371263-19370989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 209
               

               
Conread position:
               
286-553
               

               
Cow position:
               
chr23:29021486-29021752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
294-553
               

               
Cow position:
               
chr23:3282293-3282037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
294-557
               

               
Cow position:
               
chr23:40817400-40817129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
297-476
               

               
Cow position:
               
chr23:18107520-18107334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
297-554
               

               
Cow position:
               
chr23:1759091-1759332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
298-543
               

               
Cow position:
               
chr23:1921400-1921152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr23:4104231-4104481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
299-553
               

               
Cow position:
               
chr23:2488154-2487907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 18
               

               
Conread position:
               
299-553
               

               
Cow position:
               
chr23:5426258-5426518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr23:21659768-21660031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr23:1942552-1942821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
302-540
               

               
Cow position:
               
chr23:20248866-20248623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
302-548
               

               
Cow position:
               
chr23:5515792-5516049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
308-497
               

               
Cow position:
               
chr23:26942275-26942471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
308-552
               

               
Cow position:
               
chr23:33622317-33622066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
317-404
               

               
Cow position:
               
chr23:27029774-27029861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
317-491
               

               
Cow position:
               
chr23:40485125-40484946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 176
               

               
Conread position:
               
317-509
               

               
Cow position:
               
chr23:23113873-23114073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 178
               

               
Conread position:
               
317-533
               

               
Cow position:
               
chr23:33569983-33570199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
317-537
               

               
Cow position:
               
chr23:15091444-15091668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr23:18416204-18415975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
317-547
               

               
Cow position:
               
chr23:27290934-27290702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr23:8837844-8837605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr23:22496721-22496476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr23:1767674-1767914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr23:12334053-12334295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr23:13945873-13946123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 184
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr23:35239190-35239438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr23:40290695-40290465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
317-557
               

               
Cow position:
               
chr23:12091515-12091268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
47, 173
               

               
Conread position:
               
318-544
               

               
Cow position:
               
chr23:4966665-4966894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
318-552
               

               
Cow position:
               
chr23:4329836-4329591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 183
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr23:7360962-7361192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
205, 109
               

               
Conread position:
               
319-554
               

               
Cow position:
               
chr23:4327850-4327615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
319-554
               

               
Cow position:
               
chr23:19774620-19774854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
117, 169
               

               
Conread position:
               
319-554
               

               
Cow position:
               
chr23:39083299-39083537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
320-520
               

               
Cow position:
               
chr23:33153342-33153141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
107, 127
               

               
Conread position:
               
320-549
               

               
Cow position:
               
chr23:349880-349643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 178
               

               
Conread position:
               
321-553
               

               
Cow position:
               
chr23:21502789-21502546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
322-553
               

               
Cow position:
               
chr23:12363771-12363533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
14, 172
               

               
Conread position:
               
322-554
               

               
Cow position:
               
chr23:37886-38113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
326-558
               

               
Cow position:
               
chr23:24984317-24984080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
327-554
               

               
Cow position:
               
chr23:5436790-5436557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
327-554
               

               
Cow position:
               
chr23:29069591-29069355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr23:4335935-4336152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
330-539
               

               
Cow position:
               
chr23:3409047-3408840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
330-549
               

               
Cow position:
               
chr23:35938199-35938426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr23:1655747-1655980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 170
               

               
Conread position:
               
330-555
               

               
Cow position:
               
chr23:3434053-3433827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
330-558
               

               
Cow position:
               
chr23:28945209-28944979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 113
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr23:10829724-10829497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 164
               

               
Conread position:
               
332-558
               

               
Cow position:
               
chr23:26050895-26051128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
334-548
               

               
Cow position:
               
chr23:30950821-30951034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
334-554
               

               
Cow position:
               
chr23:39780617-39780840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr23:22414431-22414219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
336-557
               

               
Cow position:
               
chr23:5600415-5600648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
336-558
               

               
Cow position:
               
chr23:5745040-5745271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
337-558
               

               
Cow position:
               
chr23:5437134-5436914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
27, 152
               

               
Conread position:
               
340-547
               

               
Cow position:
               
chr23:5732417-5732629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 153
               

               
Conread position:
               
340-552
               

               
Cow position:
               
chr23:468593-468382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
343-552
               

               
Cow position:
               
chr23:18286068-18286276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
343-554
               

               
Cow position:
               
chr23:11081128-11081341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
344-548
               

               
Cow position:
               
chr23:20604835-20604638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
345-553
               

               
Cow position:
               
chr23:16076287-16076080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
345-557
               

               
Cow position:
               
chr23:3890694-3890486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
346-547
               

               
Cow position:
               
chr23:9226147-9226360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 169
               

               
Conread position:
               
346-554
               

               
Cow position:
               
chr23:36172395-36172609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
349-553
               

               
Cow position:
               
chr23:1438173-1438377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
353-553
               

               
Cow position:
               
chr23:1701051-1701256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
73, 142
               

               
Conread position:
               
356-504
               

               
Cow position:
               
chr23:9713203-9713358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
356-537
               

               
Cow position:
               
chr23:24480075-24479889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 34
               

               
Conread position:
               
360-548
               

               
Cow position:
               
chr23:39275777-39275971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
363-531
               

               
Cow position:
               
chr23:3245025-3244851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
363-537
               

               
Cow position:
               
chr23:39921310-39921475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr23:22574026-22573823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
363-557
               

               
Cow position:
               
chr23:16797919-16797716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
364-549
               

               
Cow position:
               
chr23:6035333-6035513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
365-530
               

               
Cow position:
               
chr23:3522645-3522812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
365-548
               

               
Cow position:
               
chr23:24685144-24685324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
365-549
               

               
Cow position:
               
chr23:19173460-19173283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
365-553
               

               
Cow position:
               
chr23:25363475-25363656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
367-554
               

               
Cow position:
               
chr23:4795067-4795255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
368-492
               

               
Cow position:
               
chr23:8379032-8378904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
369-553
               

               
Cow position:
               
chr23:15280602-15280412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
370-553
               

               
Cow position:
               
chr23:18036760-18036573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
370-554
               

               
Cow position:
               
chr23:18403904-18404092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
372-554
               

               
Cow position:
               
chr23:2405803-2405987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
376-553
               

               
Cow position:
               
chr23:5881616-5881433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
380-540
               

               
Cow position:
               
chr23:20002162-20002326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
386-553
               

               
Cow position:
               
chr23:2358805-2358965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
390-553
               

               
Cow position:
               
chr23:14462430-14462596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
390-553
               

               
Cow position:
               
chr23:18238609-18238442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
392-553
               

               
Cow position:
               
chr23:38845525-38845684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
399-552
               

               
Cow position:
               
chr23:35247292-35247451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
402-551
               

               
Cow position:
               
chr23:30311994-30311840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
407-554
               

               
Cow position:
               
chr23:18822926-18823075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
407-559
               

               
Cow position:
               
chr23:1499553-1499398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr23:3244507-3244383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr23:21309453-21309326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr23:26283683-26283808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr23:30655852-30655728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
428-553
               

               
Cow position:
               
chr23:9234856-9234739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
439-554
               

               
Cow position:
               
chr23:4003617-4003732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
440-554
               

               
Cow position:
               
chr23:21384943-21384834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
442-552
               

               
Cow position:
               
chr23:23904352-23904244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
442-553
               

               
Cow position:
               
chr23:7696534-7696644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
446-552
               

               
Cow position:
               
chr23:14569521-14569417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
446-554
               

               
Cow position:
               
chr23:3835615-3835510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
447-554
               

               
Cow position:
               
chr23:14895693-14895588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
449-547
               

               
Cow position:
               
chr23:4877343-4877439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               
Show alignments to all cow chromosomes.