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Cow genome map

           
Conread name:
           
Pig2-108K12
        

               
Conread position:
               
1-357
               

               
Cow position:
               
chr4:20644102-20644454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr4:63251405-63251042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr4:29710530-29710146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr4:27348705-27349077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:23535766-23536171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:10036048-10036447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr4:17330714-17330303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 206
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr4:23655514-23655920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 90
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr4:2244475-2244050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr4:46668103-46668508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr4:67392482-67392900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 91
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr4:57555478-57555914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 217
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:10024813-10025221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
318, 113
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:23560881-23561325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 225
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr4:27292435-27292012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr4:33564392-33564801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr4:39009489-39009932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr4:48499344-48499805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr4:22743858-22744290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 111
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr4:26163451-26162992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 23
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr4:1237589-1237122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr4:53832570-53833039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr4:19558241-19558719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr4:43370337-43369839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr4:56233211-56233691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 186
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr4:19584216-19584726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 216
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr4:65891535-65892002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 110
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr4:30690257-30690730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 168
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr4:53545561-53546044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 166
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr4:2609758-2610254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr4:65826349-65825815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 164
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr4:16859245-16858737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 206
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr4:37620374-37619856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr4:61999932-61999400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 106
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr4:285187-285691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr4:5610550-5610036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 199
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr4:64072835-64072304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr4:36490168-36489641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 65
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr4:17473942-17474496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr4:31136273-31136813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 152
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:359359-359904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 207
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:1046984-1046467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
222, 69
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:13979518-13980058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 55
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:21589087-21588552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 120
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:33069365-33068822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 211
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:44734093-44734638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:48030333-48030878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr4:64875572-64876116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 213
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr4:3687448-3687983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr4:27540140-27540680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 204
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr4:14471049-14470508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 206
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr4:63349965-63349420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr4:10044292-10043742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 201
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr4:14919534-14920055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr4:17877434-17877985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr4:21844608-21845150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
205, 100
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr4:68362453-68362987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr4:10036933-10037483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 76
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr4:25806418-25806966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr4:36578075-36577561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 212
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr4:51898522-51899073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 120
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr4:24002450-24001897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 201
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr4:15282884-15283434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chr4:28836050-28836605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr4:7429839-7430390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 196
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr4:19096816-19097357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 100
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr4:21532100-21531574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr4:37703785-37704335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 205
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr4:48152851-48152305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 210
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr4:68233515-68234042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr4:45644792-45644245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 99
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr4:11872394-11871848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 207
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr4:14941832-14942382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr4:15904632-15905176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 37
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr4:53125650-53126185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
1-552
               

               
Cow position:
               
chr4:59871017-59871549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 213
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:9136797-9137354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 73
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:18096141-18095599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:19434779-19435330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 207
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:20328194-20327634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 208
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:21064570-21065111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 75
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:23853718-23854255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 176
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:33097437-33096906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:42672689-42673251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 206
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:47730391-47730933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 36
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:51903121-51903680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 46
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:61898013-61897460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 204
               

               
Conread position:
               
1-553
               

               
Cow position:
               
chr4:64039642-64040190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:962128-961575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:3850071-3850627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:6653266-6653798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 121
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:10055729-10056280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:10992689-10992126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:12560540-12561116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 157
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:13327435-13326879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 195
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:18973961-18974499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 75
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:22101745-22101189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 113
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:24372335-24371784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:25369632-25370180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 205
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:25878917-25879466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:25983757-25984296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:27755792-27755228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 212
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:29805866-29805298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:30573975-30574544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
426, 206
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:36892874-36893435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 209
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:38998952-38999499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 191
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:49794201-49794735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:51783694-51784255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 88
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr4:61391680-61391151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 140
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr4:34210705-34211245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr4:13589614-13590162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 100
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr4:18255383-18255931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
436, 206
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr4:29035436-29035981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr4:30973866-30974412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 36
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr4:14813003-14812652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
317, 171
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr4:56226408-56226765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 154
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr4:40576392-40576021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 202
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr4:7250047-7249635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 69
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr4:24119395-24118880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 209
               

               
Conread position:
               
2-517
               

               
Cow position:
               
chr4:22236954-22236445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
2-535
               

               
Cow position:
               
chr4:66173269-66172739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
2-542
               

               
Cow position:
               
chr4:23647314-23646794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
2-546
               

               
Cow position:
               
chr4:51850719-51851275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 167
               

               
Conread position:
               
2-548
               

               
Cow position:
               
chr4:65842243-65841696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 204
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr4:33433731-33433181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 20
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr4:40415128-40414553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr4:55271236-55270694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 52
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr4:68944656-68944107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 205
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr4:16602534-16601987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 90
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr4:21073656-21073077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr4:34166447-34165899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 198
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr4:34209556-34210109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 30
               

               
Conread position:
               
2-554
               

               
Cow position:
               
chr4:54190628-54191165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 166
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr4:26323262-26323817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 200
               

               
Conread position:
               
2-556
               

               
Cow position:
               
chr4:242746-243308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr4:12018082-12018462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 183
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr4:3475135-3475633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr4:28399879-28399370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
3-530
               

               
Cow position:
               
chr4:3439912-3440453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr4:4185642-4186187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 203
               

               
Conread position:
               
3-546
               

               
Cow position:
               
chr4:65919145-65919676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 29
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr4:66112552-66111996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 98
               

               
Conread position:
               
4-548
               

               
Cow position:
               
chr4:65179611-65179079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 105
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr4:24432165-24432575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr4:57931424-57931856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 250
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr4:560927-561394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 11
               

               
Conread position:
               
5-510
               

               
Cow position:
               
chr4:11201343-11201852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 203
               

               
Conread position:
               
5-548
               

               
Cow position:
               
chr4:14927472-14928033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 232
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr4:44839360-44838822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 168
               

               
Conread position:
               
5-553
               

               
Cow position:
               
chr4:34172046-34171507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 199
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr4:20451-20988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
5-555
               

               
Cow position:
               
chr4:4672809-4672259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 46
               

               
Conread position:
               
5-556
               

               
Cow position:
               
chr4:25972416-25972975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 204
               

               
Conread position:
               
5-558
               

               
Cow position:
               
chr4:22073779-22073244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
6-501
               

               
Cow position:
               
chr4:22051944-22051448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 202
               

               
Conread position:
               
6-554
               

               
Cow position:
               
chr4:41301491-41300921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 464
               

               
Conread position:
               
6-557
               

               
Cow position:
               
chr4:9445165-9444608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 205
               

               
Conread position:
               
7-373
               

               
Cow position:
               
chr4:55508892-55508523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 30
               

               
Conread position:
               
7-485
               

               
Cow position:
               
chr4:53999995-53999501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 325
               

               
Conread position:
               
7-550
               

               
Cow position:
               
chr4:26400482-26401027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 200
               

               
Conread position:
               
7-550
               

               
Cow position:
               
chr4:39232002-39231450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr4:12557954-12557610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
284, 92
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr4:56852426-56852844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 194
               

               
Conread position:
               
10-537
               

               
Cow position:
               
chr4:637546-638059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
10-556
               

               
Cow position:
               
chr4:46456542-46455991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
15-539
               

               
Cow position:
               
chr4:15623369-15623911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 184
               

               
Conread position:
               
15-554
               

               
Cow position:
               
chr4:16736033-16736595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
17-451
               

               
Cow position:
               
chr4:61190987-61190544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
20-483
               

               
Cow position:
               
chr4:19437980-19438472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
21-554
               

               
Cow position:
               
chr4:27277004-27276468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 189
               

               
Conread position:
               
21-554
               

               
Cow position:
               
chr4:45235334-45234797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 184
               

               
Conread position:
               
23-547
               

               
Cow position:
               
chr4:23526232-23526763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 310
               

               
Conread position:
               
23-557
               

               
Cow position:
               
chr4:30779294-30778744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 190
               

               
Conread position:
               
24-459
               

               
Cow position:
               
chr4:11924848-11924414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 13
               

               
Conread position:
               
24-556
               

               
Cow position:
               
chr4:4084907-4084372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
24-557
               

               
Cow position:
               
chr4:22138692-22138142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 156
               

               
Conread position:
               
25-482
               

               
Cow position:
               
chr4:56409725-56410184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 188
               

               
Conread position:
               
27-414
               

               
Cow position:
               
chr4:26549001-26549391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
27-508
               

               
Cow position:
               
chr4:19497706-19497233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
28-544
               

               
Cow position:
               
chr4:9815804-9815281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 175
               

               
Conread position:
               
28-553
               

               
Cow position:
               
chr4:3421191-3421697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
28-553
               

               
Cow position:
               
chr4:10916277-10915761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 101
               

               
Conread position:
               
31-491
               

               
Cow position:
               
chr4:61972926-61972447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 179
               

               
Conread position:
               
31-548
               

               
Cow position:
               
chr4:33971346-33970827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 100
               

               
Conread position:
               
31-554
               

               
Cow position:
               
chr4:65816149-65815631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 186
               

               
Conread position:
               
32-554
               

               
Cow position:
               
chr4:34383798-34383266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 82
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr4:2671712-2671351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
33-549
               

               
Cow position:
               
chr4:21058840-21058313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 183
               

               
Conread position:
               
37-444
               

               
Cow position:
               
chr4:61399865-61399476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
188, 47
               

               
Conread position:
               
37-555
               

               
Cow position:
               
chr4:1014625-1015147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 172
               

               
Conread position:
               
38-483
               

               
Cow position:
               
chr4:46274743-46275185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 175
               

               
Conread position:
               
40-554
               

               
Cow position:
               
chr4:1495832-1495333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 30
               

               
Conread position:
               
42-557
               

               
Cow position:
               
chr4:66256247-66256766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 110
               

               
Conread position:
               
43-553
               

               
Cow position:
               
chr4:15635882-15635373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
43-554
               

               
Cow position:
               
chr4:16799626-16799110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 27
               

               
Conread position:
               
46-548
               

               
Cow position:
               
chr4:13694104-13693602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 75
               

               
Conread position:
               
46-554
               

               
Cow position:
               
chr4:12003788-12004290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 55
               

               
Conread position:
               
46-554
               

               
Cow position:
               
chr4:52748891-52748381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
47-552
               

               
Cow position:
               
chr4:25197932-25197421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 160
               

               
Conread position:
               
49-535
               

               
Cow position:
               
chr4:62157839-62158318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
49-548
               

               
Cow position:
               
chr4:53100376-53100871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 79
               

               
Conread position:
               
50-403
               

               
Cow position:
               
chr4:61304858-61304498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
50-553
               

               
Cow position:
               
chr4:62772369-62771845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 162
               

               
Conread position:
               
50-557
               

               
Cow position:
               
chr4:15872153-15871654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 133
               

               
Conread position:
               
53-554
               

               
Cow position:
               
chr4:10731790-10732299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
54-548
               

               
Cow position:
               
chr4:21257554-21257055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 154
               

               
Conread position:
               
55-546
               

               
Cow position:
               
chr4:25889281-25888764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
56-553
               

               
Cow position:
               
chr4:17833331-17832826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 151
               

               
Conread position:
               
65-553
               

               
Cow position:
               
chr4:53207891-53208368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 118
               

               
Conread position:
               
68-547
               

               
Cow position:
               
chr4:16239551-16239100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
73-508
               

               
Cow position:
               
chr4:24458508-24458073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 140
               

               
Conread position:
               
75-415
               

               
Cow position:
               
chr4:23573136-23573483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
240, 112
               

               
Conread position:
               
76-548
               

               
Cow position:
               
chr4:63459621-63459153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
76-552
               

               
Cow position:
               
chr4:12591615-12591140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 18
               

               
Conread position:
               
76-554
               

               
Cow position:
               
chr4:65650527-65650058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 129
               

               
Conread position:
               
77-486
               

               
Cow position:
               
chr4:2422177-2422586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
79-510
               

               
Cow position:
               
chr4:53208836-53209269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 128
               

               
Conread position:
               
79-543
               

               
Cow position:
               
chr4:68387392-68387857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 120
               

               
Conread position:
               
80-425
               

               
Cow position:
               
chr4:43543136-43542793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
82-417
               

               
Cow position:
               
chr4:14159524-14159191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 124
               

               
Conread position:
               
82-503
               

               
Cow position:
               
chr4:26175643-26175220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 125
               

               
Conread position:
               
82-552
               

               
Cow position:
               
chr4:12903417-12903895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 119
               

               
Conread position:
               
83-485
               

               
Cow position:
               
chr4:48137515-48137921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
84-405
               

               
Cow position:
               
chr4:23558088-23558415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
238, 129
               

               
Conread position:
               
84-423
               

               
Cow position:
               
chr4:23565116-23565458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
216, 126
               

               
Conread position:
               
84-423
               

               
Cow position:
               
chr4:23570408-23570744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
248, 65
               

               
Conread position:
               
84-425
               

               
Cow position:
               
chr4:23554856-23555200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
84-425
               

               
Cow position:
               
chr4:54501847-54501506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 129
               

               
Conread position:
               
86-517
               

               
Cow position:
               
chr4:32260243-32259806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 121
               

               
Conread position:
               
86-548
               

               
Cow position:
               
chr4:11100064-11099585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
87-360
               

               
Cow position:
               
chr4:5915789-5916066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
87-412
               

               
Cow position:
               
chr4:46176863-46176529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
87-537
               

               
Cow position:
               
chr4:21370981-21371450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 182
               

               
Conread position:
               
87-554
               

               
Cow position:
               
chr4:19306861-19307332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 120
               

               
Conread position:
               
88-513
               

               
Cow position:
               
chr4:17124685-17124257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 116
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr4:69405980-69406421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
91-554
               

               
Cow position:
               
chr4:58248021-58248477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
93-554
               

               
Cow position:
               
chr4:46477327-46476870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 115
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr4:38952171-38952628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 113
               

               
Conread position:
               
95-553
               

               
Cow position:
               
chr4:62471680-62472154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
100-491
               

               
Cow position:
               
chr4:11901942-11901547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 102
               

               
Conread position:
               
100-557
               

               
Cow position:
               
chr4:19237861-19238296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
101-396
               

               
Cow position:
               
chr4:22073049-22072756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 76
               

               
Conread position:
               
101-547
               

               
Cow position:
               
chr4:36840899-36841335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 107
               

               
Conread position:
               
101-556
               

               
Cow position:
               
chr4:43866229-43865779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
102-357
               

               
Cow position:
               
chr4:9696-9443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
102-491
               

               
Cow position:
               
chr4:69343337-69343719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 43
               

               
Conread position:
               
102-528
               

               
Cow position:
               
chr4:33421727-33421316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
217, 54
               

               
Conread position:
               
102-551
               

               
Cow position:
               
chr4:22528761-22528315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
103-540
               

               
Cow position:
               
chr4:21392175-21391750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 18
               

               
Conread position:
               
104-491
               

               
Cow position:
               
chr4:480385-479994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 106
               

               
Conread position:
               
106-530
               

               
Cow position:
               
chr4:19141919-19142328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 73
               

               
Conread position:
               
107-549
               

               
Cow position:
               
chr4:7873-7428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 100
               

               
Conread position:
               
108-508
               

               
Cow position:
               
chr4:13832995-13832578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 217
               

               
Conread position:
               
109-418
               

               
Cow position:
               
chr4:65168377-65168070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 12
               

               
Conread position:
               
109-534
               

               
Cow position:
               
chr4:3990994-3990580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr4:7704678-7704249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 101
               

               
Conread position:
               
114-510
               

               
Cow position:
               
chr4:11671086-11671484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 70
               

               
Conread position:
               
114-554
               

               
Cow position:
               
chr4:59056207-59055785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
115-478
               

               
Cow position:
               
chr4:1915942-1915576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 92
               

               
Conread position:
               
116-508
               

               
Cow position:
               
chr4:46059107-46058734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 97
               

               
Conread position:
               
117-425
               

               
Cow position:
               
chr4:62570429-62570761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 259
               

               
Conread position:
               
117-544
               

               
Cow position:
               
chr4:14944675-14945128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
117-557
               

               
Cow position:
               
chr4:3388183-3388622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
118-425
               

               
Cow position:
               
chr4:42232305-42232601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 13
               

               
Conread position:
               
118-537
               

               
Cow position:
               
chr4:33935356-33935791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 89
               

               
Conread position:
               
121-546
               

               
Cow position:
               
chr4:17112239-17111806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 85
               

               
Conread position:
               
121-553
               

               
Cow position:
               
chr4:4085490-4085036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 72
               

               
Conread position:
               
121-562
               

               
Cow position:
               
chr4:8947037-8947479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
122-485
               

               
Cow position:
               
chr4:61215357-61214986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
122-554
               

               
Cow position:
               
chr4:19313645-19314088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 89
               

               
Conread position:
               
124-554
               

               
Cow position:
               
chr4:24744773-24744330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 83
               

               
Conread position:
               
125-554
               

               
Cow position:
               
chr4:13668970-13668546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 70
               

               
Conread position:
               
130-484
               

               
Cow position:
               
chr4:22216008-22215645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 83
               

               
Conread position:
               
130-548
               

               
Cow position:
               
chr4:53763467-53763056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
131-507
               

               
Cow position:
               
chr4:44030020-44029640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
131-553
               

               
Cow position:
               
chr4:11187108-11187526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
133-537
               

               
Cow position:
               
chr4:10905805-10905406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
133-548
               

               
Cow position:
               
chr4:44496037-44496443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 61
               

               
Conread position:
               
133-553
               

               
Cow position:
               
chr4:19265224-19265648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 74
               

               
Conread position:
               
133-554
               

               
Cow position:
               
chr4:60897622-60897207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 81
               

               
Conread position:
               
134-493
               

               
Cow position:
               
chr4:52167213-52166835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
134-537
               

               
Cow position:
               
chr4:49204015-49203617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
135-425
               

               
Cow position:
               
chr4:45574-45863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 65
               

               
Conread position:
               
135-554
               

               
Cow position:
               
chr4:31023099-31023520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 41
               

               
Conread position:
               
135-556
               

               
Cow position:
               
chr4:44782027-44782452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 72
               

               
Conread position:
               
136-485
               

               
Cow position:
               
chr4:65731273-65730911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
136-546
               

               
Cow position:
               
chr4:48485647-48486062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
136-556
               

               
Cow position:
               
chr4:42424146-42423727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 32
               

               
Conread position:
               
137-554
               

               
Cow position:
               
chr4:56240191-56239784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
141-552
               

               
Cow position:
               
chr4:49159108-49158721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
141-554
               

               
Cow position:
               
chr4:68076869-68076463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
178, 66
               

               
Conread position:
               
142-425
               

               
Cow position:
               
chr4:63365714-63365433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
177, 60
               

               
Conread position:
               
144-447
               

               
Cow position:
               
chr4:29811908-29811601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 69
               

               
Conread position:
               
144-551
               

               
Cow position:
               
chr4:45589925-45589528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
145-537
               

               
Cow position:
               
chr4:1060599-1060212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 65
               

               
Conread position:
               
146-491
               

               
Cow position:
               
chr4:10412045-10412396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
148-544
               

               
Cow position:
               
chr4:49629149-49629547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 170
               

               
Conread position:
               
148-554
               

               
Cow position:
               
chr4:68764183-68764591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr4:5577823-5577614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
170, 58
               

               
Conread position:
               
150-485
               

               
Cow position:
               
chr4:4736705-4737024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
150-554
               

               
Cow position:
               
chr4:509230-508833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 57
               

               
Conread position:
               
150-556
               

               
Cow position:
               
chr4:22010390-22009980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 57
               

               
Conread position:
               
152-554
               

               
Cow position:
               
chr4:22741722-22741340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
265, 55
               

               
Conread position:
               
153-534
               

               
Cow position:
               
chr4:34208599-34208993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
153-554
               

               
Cow position:
               
chr4:570467-570868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
154-425
               

               
Cow position:
               
chr4:21064329-21064062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 44
               

               
Conread position:
               
154-553
               

               
Cow position:
               
chr4:57584554-57584167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
155-537
               

               
Cow position:
               
chr4:23610623-23611018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
155-553
               

               
Cow position:
               
chr4:37915656-37915261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 52
               

               
Conread position:
               
156-553
               

               
Cow position:
               
chr4:12048922-12049321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
159-485
               

               
Cow position:
               
chr4:19561372-19561689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 52
               

               
Conread position:
               
159-485
               

               
Cow position:
               
chr4:23060330-23059987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
159-554
               

               
Cow position:
               
chr4:37935604-37935209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 48
               

               
Conread position:
               
160-554
               

               
Cow position:
               
chr4:6208131-6208537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 182
               

               
Conread position:
               
162-553
               

               
Cow position:
               
chr4:19597634-19597249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
162-557
               

               
Cow position:
               
chr4:62317122-62317524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
163-549
               

               
Cow position:
               
chr4:19007721-19008117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
163-552
               

               
Cow position:
               
chr4:17200961-17201329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
263, 43
               

               
Conread position:
               
167-548
               

               
Cow position:
               
chr4:23599858-23600237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 23
               

               
Conread position:
               
167-554
               

               
Cow position:
               
chr4:45738794-45738399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
168-557
               

               
Cow position:
               
chr4:34310773-34310380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 331
               

               
Conread position:
               
169-402
               

               
Cow position:
               
chr4:56514248-56514016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
169-521
               

               
Cow position:
               
chr4:60371145-60370783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
170-425
               

               
Cow position:
               
chr4:69305344-69305593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
174-557
               

               
Cow position:
               
chr4:23451404-23451015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 33
               

               
Conread position:
               
175-534
               

               
Cow position:
               
chr4:45662807-45662453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 32
               

               
Conread position:
               
175-547
               

               
Cow position:
               
chr4:5999513-5999126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
177-552
               

               
Cow position:
               
chr4:45775646-45775264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr4:48961792-48961416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
181-531
               

               
Cow position:
               
chr4:29237457-29237117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
181-537
               

               
Cow position:
               
chr4:37342814-37343186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr4:620443-620222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
193-510
               

               
Cow position:
               
chr4:58261447-58261118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
193-547
               

               
Cow position:
               
chr4:51727794-51728148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
193-551
               

               
Cow position:
               
chr4:19582905-19582545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
193-553
               

               
Cow position:
               
chr4:54468585-54468228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr4:36730901-36731266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
193-554
               

               
Cow position:
               
chr4:39128242-39128613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
194-349
               

               
Cow position:
               
chr4:18755898-18756052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 10
               

               
Conread position:
               
194-551
               

               
Cow position:
               
chr4:19322369-19322005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 20
               

               
Conread position:
               
195-557
               

               
Cow position:
               
chr4:12030552-12030924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr4:6792154-6792444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
186, 5
               

               
Conread position:
               
203-558
               

               
Cow position:
               
chr4:46060664-46061022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
204-540
               

               
Cow position:
               
chr4:46550104-46550442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
205-537
               

               
Cow position:
               
chr4:51866712-51867051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
210-517
               

               
Cow position:
               
chr4:35940286-35939968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
210-543
               

               
Cow position:
               
chr4:15439322-15439641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
211-558
               

               
Cow position:
               
chr4:37691583-37691232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
213, 99
               

               
Conread position:
               
212-425
               

               
Cow position:
               
chr4:42267017-42266809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
212-537
               

               
Cow position:
               
chr4:24686159-24685820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
212-541
               

               
Cow position:
               
chr4:51003103-51003429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
212-548
               

               
Cow position:
               
chr4:19744614-19744945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
212-549
               

               
Cow position:
               
chr4:2893751-2894102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
212-552
               

               
Cow position:
               
chr4:11021924-11021577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
212-553
               

               
Cow position:
               
chr4:39455781-39456114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 12
               

               
Conread position:
               
213-483
               

               
Cow position:
               
chr4:67408267-67408534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
213-485
               

               
Cow position:
               
chr4:43495630-43495906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
213-552
               

               
Cow position:
               
chr4:29291250-29291588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr4:23509315-23509669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 292
               

               
Conread position:
               
213-554
               

               
Cow position:
               
chr4:47348560-47348902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 11
               

               
Conread position:
               
213-556
               

               
Cow position:
               
chr4:488715-488345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 305
               

               
Conread position:
               
214-530
               

               
Cow position:
               
chr4:20298996-20299326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 148
               

               
Conread position:
               
216-416
               

               
Cow position:
               
chr4:55523103-55523297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
216-422
               

               
Cow position:
               
chr4:44073041-44072826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr4:59106082-59105795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr4:51739972-51739642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 9
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr4:9845653-9845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr4:36755478-36755816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 171
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr4:44612732-44613081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
216-554
               

               
Cow position:
               
chr4:46591393-46591743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
216-556
               

               
Cow position:
               
chr4:3251807-3251467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 195
               

               
Conread position:
               
216-556
               

               
Cow position:
               
chr4:54930687-54930344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
216-557
               

               
Cow position:
               
chr4:1405271-1405619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
217-418
               

               
Cow position:
               
chr4:62567137-62567347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
217-469
               

               
Cow position:
               
chr4:2141476-2141743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
217-486
               

               
Cow position:
               
chr4:52632239-52631954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
143, 91
               

               
Conread position:
               
217-505
               

               
Cow position:
               
chr4:8801233-8801535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
217-545
               

               
Cow position:
               
chr4:25359337-25359665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
217-549
               

               
Cow position:
               
chr4:203416-203074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr4:28772335-28771992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr4:54937616-54937970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 141
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr4:5461121-5460785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr4:17052866-17052517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr4:33395956-33395622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 7
               

               
Conread position:
               
217-554
               

               
Cow position:
               
chr4:56570535-56570882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
217-555
               

               
Cow position:
               
chr4:57147042-57147382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
217-557
               

               
Cow position:
               
chr4:7847537-7847201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
217-557
               

               
Cow position:
               
chr4:59785046-59785401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 288
               

               
Conread position:
               
218-548
               

               
Cow position:
               
chr4:31004672-31004339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 24
               

               
Conread position:
               
220-554
               

               
Cow position:
               
chr4:55395502-55395837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
221-540
               

               
Cow position:
               
chr4:63119496-63119171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
221-554
               

               
Cow position:
               
chr4:19316262-19315932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
221-556
               

               
Cow position:
               
chr4:32725959-32726302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
222-360
               

               
Cow position:
               
chr4:52177404-52177258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
222-425
               

               
Cow position:
               
chr4:54667955-54667745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chr4:49424574-49424842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
204, 97
               

               
Conread position:
               
222-495
               

               
Cow position:
               
chr4:46597119-46597398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
222-496
               

               
Cow position:
               
chr4:26746220-26746501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 276
               

               
Conread position:
               
222-496
               

               
Cow position:
               
chr4:27561132-27561416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 268
               

               
Conread position:
               
222-503
               

               
Cow position:
               
chr4:17660469-17660162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 288
               

               
Conread position:
               
222-516
               

               
Cow position:
               
chr4:51630393-51630682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 145
               

               
Conread position:
               
222-531
               

               
Cow position:
               
chr4:51122793-51123112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr4:19699835-19700165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 219
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr4:33612627-33612289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 276
               

               
Conread position:
               
222-548
               

               
Cow position:
               
chr4:35981725-35982069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
222-549
               

               
Cow position:
               
chr4:33623454-33623784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
97, 222
               

               
Conread position:
               
222-551
               

               
Cow position:
               
chr4:44451266-44451589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
222-552
               

               
Cow position:
               
chr4:395686-396007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 85
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr4:4321270-4320915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 250
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr4:5797703-5798041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
37, 177
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr4:23847315-23846975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 271
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr4:31348458-31348110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr4:41867180-41867512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 182
               

               
Conread position:
               
222-557
               

               
Cow position:
               
chr4:8769846-8770177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
222-559
               

               
Cow position:
               
chr4:43895067-43894737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
223-399
               

               
Cow position:
               
chr4:10471960-10472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
223-548
               

               
Cow position:
               
chr4:23445314-23444976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr4:66548016-66547692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 80
               

               
Conread position:
               
224-375
               

               
Cow position:
               
chr4:46385840-46385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
224-467
               

               
Cow position:
               
chr4:43909490-43909736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
224-544
               

               
Cow position:
               
chr4:47289808-47290145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 283
               

               
Conread position:
               
224-548
               

               
Cow position:
               
chr4:3340689-3341022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
95, 272
               

               
Conread position:
               
224-551
               

               
Cow position:
               
chr4:7571147-7571486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
224-553
               

               
Cow position:
               
chr4:34641991-34641651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 126
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr4:31172404-31172747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 280
               

               
Conread position:
               
224-554
               

               
Cow position:
               
chr4:34630640-34630974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 25
               

               
Conread position:
               
225-529
               

               
Cow position:
               
chr4:123462-123159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
94, 205
               

               
Conread position:
               
225-553
               

               
Cow position:
               
chr4:63096336-63095999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
225-557
               

               
Cow position:
               
chr4:1985388-1985726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
226-370
               

               
Cow position:
               
chr4:61066392-61066537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
226-486
               

               
Cow position:
               
chr4:54975048-54975306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
226-491
               

               
Cow position:
               
chr4:62983813-62983537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
226-548
               

               
Cow position:
               
chr4:3283709-3283377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
226-553
               

               
Cow position:
               
chr4:13435482-13435812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
227-408
               

               
Cow position:
               
chr4:2536574-2536757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
227-553
               

               
Cow position:
               
chr4:27529854-27530193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 273
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr4:13406447-13406784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
228-423
               

               
Cow position:
               
chr4:12260040-12259840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
228-553
               

               
Cow position:
               
chr4:27664747-27665088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 276
               

               
Conread position:
               
229-486
               

               
Cow position:
               
chr4:33357674-33357946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
229-548
               

               
Cow position:
               
chr4:59008626-59008285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
229-549
               

               
Cow position:
               
chr4:50203490-50203824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
90, 277
               

               
Conread position:
               
229-554
               

               
Cow position:
               
chr4:45367479-45367815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
229-554
               

               
Cow position:
               
chr4:45583385-45583047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 278
               

               
Conread position:
               
230-368
               

               
Cow position:
               
chr4:19577807-19577952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
230-506
               

               
Cow position:
               
chr4:62921113-62920839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
143, 87
               

               
Conread position:
               
230-540
               

               
Cow position:
               
chr4:42922102-42921798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 86
               

               
Conread position:
               
230-553
               

               
Cow position:
               
chr4:63965247-63964916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
46, 268
               

               
Conread position:
               
231-421
               

               
Cow position:
               
chr4:40410375-40410187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
88, 106
               

               
Conread position:
               
233-396
               

               
Cow position:
               
chr4:33062656-33062827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 162
               

               
Conread position:
               
233-425
               

               
Cow position:
               
chr4:18577030-18576831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
234-424
               

               
Cow position:
               
chr4:41292232-41292040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
234-480
               

               
Cow position:
               
chr4:49089542-49089795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 91
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr4:12676561-12676875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr4:19708689-19709015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
234-554
               

               
Cow position:
               
chr4:20157665-20157341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
235-495
               

               
Cow position:
               
chr4:5630004-5629738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 249
               

               
Conread position:
               
235-553
               

               
Cow position:
               
chr4:49813918-49813605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
84, 144
               

               
Conread position:
               
235-562
               

               
Cow position:
               
chr4:13255845-13256170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
236-388
               

               
Cow position:
               
chr4:45972080-45971925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
238-557
               

               
Cow position:
               
chr4:3820174-3820508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
239-484
               

               
Cow position:
               
chr4:44025065-44024811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 147
               

               
Conread position:
               
239-545
               

               
Cow position:
               
chr4:14938287-14938597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
239-553
               

               
Cow position:
               
chr4:21233118-21232799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr4:3268582-3268289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr4:3837032-3837351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
239-554
               

               
Cow position:
               
chr4:41186153-41185844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
240-486
               

               
Cow position:
               
chr4:63813549-63813303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 150
               

               
Conread position:
               
240-510
               

               
Cow position:
               
chr4:11897545-11897263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 261
               

               
Conread position:
               
240-554
               

               
Cow position:
               
chr4:21874584-21874878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
241-424
               

               
Cow position:
               
chr4:46370565-46370757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
241-548
               

               
Cow position:
               
chr4:54455589-54455273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 255
               

               
Conread position:
               
241-553
               

               
Cow position:
               
chr4:26659060-26659375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
242-484
               

               
Cow position:
               
chr4:52497819-52497589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
243-421
               

               
Cow position:
               
chr4:51408206-51408034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr4:12127886-12127563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 219
               

               
Conread position:
               
243-554
               

               
Cow position:
               
chr4:37502578-37502888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
115, 205
               

               
Conread position:
               
244-549
               

               
Cow position:
               
chr4:13043028-13043334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
244-549
               

               
Cow position:
               
chr4:58881209-58880890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 257
               

               
Conread position:
               
244-554
               

               
Cow position:
               
chr4:65431903-65432226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
245-544
               

               
Cow position:
               
chr4:11004957-11004669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
246-531
               

               
Cow position:
               
chr4:20502414-20502689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
247-491
               

               
Cow position:
               
chr4:46501114-46501360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
248-522
               

               
Cow position:
               
chr4:13871691-13871944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
249-423
               

               
Cow position:
               
chr4:43295929-43295753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
106, 119
               

               
Conread position:
               
249-508
               

               
Cow position:
               
chr4:23911826-23911564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
253-475
               

               
Cow position:
               
chr4:41908025-41907802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
66, 196
               

               
Conread position:
               
253-510
               

               
Cow position:
               
chr4:19463257-19463528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 252
               

               
Conread position:
               
254-496
               

               
Cow position:
               
chr4:43750044-43749794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 194
               

               
Conread position:
               
254-504
               

               
Cow position:
               
chr4:56435573-56435832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
254-557
               

               
Cow position:
               
chr4:8704752-8705073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 264
               

               
Conread position:
               
255-554
               

               
Cow position:
               
chr4:2601998-2602309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 245
               

               
Conread position:
               
256-554
               

               
Cow position:
               
chr4:13222406-13222111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
256-560
               

               
Cow position:
               
chr4:41602618-41602931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
256-562
               

               
Cow position:
               
chr4:25356536-25356236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 104
               

               
Conread position:
               
257-554
               

               
Cow position:
               
chr4:22860935-22860635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
258-425
               

               
Cow position:
               
chr4:44902215-44902379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
258-554
               

               
Cow position:
               
chr4:56590802-56591113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 251
               

               
Conread position:
               
259-484
               

               
Cow position:
               
chr4:69385880-69386095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
260-554
               

               
Cow position:
               
chr4:10999930-10999639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
262-550
               

               
Cow position:
               
chr4:44973418-44973706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
265-491
               

               
Cow position:
               
chr4:27687702-27687941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
54, 236
               

               
Conread position:
               
265-554
               

               
Cow position:
               
chr4:16762953-16762650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
265-556
               

               
Cow position:
               
chr4:24810668-24810374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 168
               

               
Conread position:
               
266-554
               

               
Cow position:
               
chr4:59277700-59277404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 230
               

               
Conread position:
               
269-487
               

               
Cow position:
               
chr4:34924910-34924679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
269-546
               

               
Cow position:
               
chr4:38935141-38935427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 226
               

               
Conread position:
               
270-482
               

               
Cow position:
               
chr4:36724826-36725047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
273-540
               

               
Cow position:
               
chr4:28543816-28543552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 160
               

               
Conread position:
               
273-557
               

               
Cow position:
               
chr4:31506243-31505945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
276-521
               

               
Cow position:
               
chr4:23070145-23069890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
276-554
               

               
Cow position:
               
chr4:30791754-30792044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
277-553
               

               
Cow position:
               
chr4:66118736-66118458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 158
               

               
Conread position:
               
277-554
               

               
Cow position:
               
chr4:48321819-48322112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
81, 225
               

               
Conread position:
               
279-528
               

               
Cow position:
               
chr4:1354821-1354575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
79, 150
               

               
Conread position:
               
280-554
               

               
Cow position:
               
chr4:51768906-51769179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
281-554
               

               
Cow position:
               
chr4:29384424-29384159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
286-548
               

               
Cow position:
               
chr4:28839425-28839687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
286-553
               

               
Cow position:
               
chr4:34022782-34022510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
138, 31
               

               
Conread position:
               
286-554
               

               
Cow position:
               
chr4:13974172-13973894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
287-556
               

               
Cow position:
               
chr4:11496830-11496572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
288-531
               

               
Cow position:
               
chr4:38705960-38705720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
288-548
               

               
Cow position:
               
chr4:43515524-43515786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
288-551
               

               
Cow position:
               
chr4:54111545-54111815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
288-554
               

               
Cow position:
               
chr4:16593885-16594158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
288-554
               

               
Cow position:
               
chr4:19408198-19407922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
37, 212
               

               
Conread position:
               
288-562
               

               
Cow position:
               
chr4:46552513-46552254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
294-553
               

               
Cow position:
               
chr4:29106712-29106982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
294-556
               

               
Cow position:
               
chr4:13941272-13941534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
296-554
               

               
Cow position:
               
chr4:32459047-32458784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
297-553
               

               
Cow position:
               
chr4:2885729-2885465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
298-538
               

               
Cow position:
               
chr4:44676013-44676253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr4:13344363-13344614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
298-554
               

               
Cow position:
               
chr4:48143642-48143914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
298-557
               

               
Cow position:
               
chr4:33101000-33100731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
299-425
               

               
Cow position:
               
chr4:45574823-45574947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
299-540
               

               
Cow position:
               
chr4:11331910-11332159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
299-547
               

               
Cow position:
               
chr4:20842742-20842981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
299-554
               

               
Cow position:
               
chr4:22713673-22713418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
299-556
               

               
Cow position:
               
chr4:11272275-11272015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
299-557
               

               
Cow position:
               
chr4:22907341-22907583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
300-547
               

               
Cow position:
               
chr4:10378924-10379179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 194
               

               
Conread position:
               
300-548
               

               
Cow position:
               
chr4:45711187-45711433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 111
               

               
Conread position:
               
300-554
               

               
Cow position:
               
chr4:22196372-22196139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
302-492
               

               
Cow position:
               
chr4:33869476-33869670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
302-547
               

               
Cow position:
               
chr4:17774536-17774281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 198
               

               
Conread position:
               
304-512
               

               
Cow position:
               
chr4:21517187-21516969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 194
               

               
Conread position:
               
306-554
               

               
Cow position:
               
chr4:41371116-41370865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
308-548
               

               
Cow position:
               
chr4:20147011-20147253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
315-554
               

               
Cow position:
               
chr4:19501251-19501016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
316-425
               

               
Cow position:
               
chr4:63077444-63077334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
316-486
               

               
Cow position:
               
chr4:30929429-30929612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
317-494
               

               
Cow position:
               
chr4:46720329-46720148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
317-517
               

               
Cow position:
               
chr4:3689543-3689743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
317-550
               

               
Cow position:
               
chr4:27344836-27344609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr4:65175304-65175071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr4:64104-63866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr4:4843412-4843169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 179
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr4:29238204-29237969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 121
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr4:38944426-38944183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 182
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr4:54479069-54478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:2099468-2099706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:16881528-16881285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 136
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:27632288-27632519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:34369618-34369374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:36929152-36929385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
109, 175
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:45685303-45685533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:50769931-50769690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
112, 175
               

               
Conread position:
               
317-554
               

               
Cow position:
               
chr4:52823569-52823326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
317-556
               

               
Cow position:
               
chr4:38887302-38887033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
317-558
               

               
Cow position:
               
chr4:9925800-9925549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
318-547
               

               
Cow position:
               
chr4:17186517-17186282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 160
               

               
Conread position:
               
318-552
               

               
Cow position:
               
chr4:69543014-69543256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 179
               

               
Conread position:
               
319-483
               

               
Cow position:
               
chr4:68855488-68855653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr4:47041587-47041354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
322-553
               

               
Cow position:
               
chr4:36290468-36290699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
101, 117
               

               
Conread position:
               
324-554
               

               
Cow position:
               
chr4:47510232-47510460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 168
               

               
Conread position:
               
326-554
               

               
Cow position:
               
chr4:53346170-53346403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
326-557
               

               
Cow position:
               
chr4:48104729-48104490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
329-554
               

               
Cow position:
               
chr4:59377761-59377985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 97
               

               
Conread position:
               
330-510
               

               
Cow position:
               
chr4:19423235-19423412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
330-551
               

               
Cow position:
               
chr4:65950496-65950728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
330-554
               

               
Cow position:
               
chr4:61313360-61313137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr4:45077225-45077001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr4:47262381-47262610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr4:51605759-51605537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
332-491
               

               
Cow position:
               
chr4:47047743-47047911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
332-557
               

               
Cow position:
               
chr4:33091229-33091452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
334-553
               

               
Cow position:
               
chr4:20027249-20027028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
334-554
               

               
Cow position:
               
chr4:52087787-52088001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
334-557
               

               
Cow position:
               
chr4:54171474-54171705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr4:48409413-48409194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
335-554
               

               
Cow position:
               
chr4:54524477-54524269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
335-558
               

               
Cow position:
               
chr4:45249829-45250050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
336-553
               

               
Cow position:
               
chr4:54927586-54927365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
337-554
               

               
Cow position:
               
chr4:18756288-18756510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
337-554
               

               
Cow position:
               
chr4:37313025-37313241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
337-558
               

               
Cow position:
               
chr4:4826980-4827208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
339-485
               

               
Cow position:
               
chr4:5047481-5047331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
343-532
               

               
Cow position:
               
chr4:52307751-52307568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
344-496
               

               
Cow position:
               
chr4:26011714-26011869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
344-545
               

               
Cow position:
               
chr4:25537407-25537615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
344-553
               

               
Cow position:
               
chr4:37732626-37732408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
346-554
               

               
Cow position:
               
chr4:5577337-5577135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
348-554
               

               
Cow position:
               
chr4:24481798-24481596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
352-552
               

               
Cow position:
               
chr4:48396924-48396722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr4:55508370-55508172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
352-557
               

               
Cow position:
               
chr4:48173008-48173215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
6, 140
               

               
Conread position:
               
356-554
               

               
Cow position:
               
chr4:11380158-11380355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
359-554
               

               
Cow position:
               
chr4:13026177-13026380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
363-551
               

               
Cow position:
               
chr4:52779733-52779923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr4:45073945-45074135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 129
               

               
Conread position:
               
363-554
               

               
Cow position:
               
chr4:46183291-46183489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
363-557
               

               
Cow position:
               
chr4:45636045-45636245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
364-554
               

               
Cow position:
               
chr4:16814270-16814458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
364-554
               

               
Cow position:
               
chr4:38946090-38946291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
365-554
               

               
Cow position:
               
chr4:22546955-22546766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
365-554
               

               
Cow position:
               
chr4:46494179-46494379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
366-558
               

               
Cow position:
               
chr4:16513636-16513444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 122
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr4:38157206-38157013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
367-554
               

               
Cow position:
               
chr4:37675500-37675689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
367-557
               

               
Cow position:
               
chr4:18107273-18107081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
368-548
               

               
Cow position:
               
chr4:17084455-17084268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
369-557
               

               
Cow position:
               
chr4:12901667-12901479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
371-562
               

               
Cow position:
               
chr4:45013275-45013084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
372-482
               

               
Cow position:
               
chr4:26683565-26683680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
372-551
               

               
Cow position:
               
chr4:45596140-45595959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
372-554
               

               
Cow position:
               
chr4:19098355-19098548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
372-554
               

               
Cow position:
               
chr4:65265421-65265230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
374-554
               

               
Cow position:
               
chr4:11610768-11610946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
374-554
               

               
Cow position:
               
chr4:45724767-45724937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
379-551
               

               
Cow position:
               
chr4:46136648-46136823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
379-553
               

               
Cow position:
               
chr4:54789536-54789714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
385-553
               

               
Cow position:
               
chr4:59963726-59963887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
385-558
               

               
Cow position:
               
chr4:13145822-13146000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
386-544
               

               
Cow position:
               
chr4:45563646-45563808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
387-544
               

               
Cow position:
               
chr4:51729857-51730016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
387-554
               

               
Cow position:
               
chr4:32693689-32693864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 111
               

               
Conread position:
               
387-557
               

               
Cow position:
               
chr4:45799779-45799951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
389-554
               

               
Cow position:
               
chr4:19102978-19102806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
390-554
               

               
Cow position:
               
chr4:44773138-44772967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
390-557
               

               
Cow position:
               
chr4:45626714-45626549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
392-554
               

               
Cow position:
               
chr4:64657386-64657222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
393-554
               

               
Cow position:
               
chr4:19292631-19292797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
394-546
               

               
Cow position:
               
chr4:68772174-68772326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
394-558
               

               
Cow position:
               
chr4:63472162-63471995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
400-557
               

               
Cow position:
               
chr4:19573204-19573363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
401-554
               

               
Cow position:
               
chr4:5964069-5963913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
407-552
               

               
Cow position:
               
chr4:19430285-19430439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
407-554
               

               
Cow position:
               
chr4:54921163-54921015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
408-554
               

               
Cow position:
               
chr4:21173774-21173921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
410-554
               

               
Cow position:
               
chr4:45705973-45706115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
427-554
               

               
Cow position:
               
chr4:41292002-41291878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
429-554
               

               
Cow position:
               
chr4:51920494-51920620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
430-554
               

               
Cow position:
               
chr4:33181498-33181620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
442-556
               

               
Cow position:
               
chr4:12135961-12135848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
447-554
               

               
Cow position:
               
chr4:15462282-15462175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
449-554
               

               
Cow position:
               
chr4:46560153-46560255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
450-554
               

               
Cow position:
               
chr4:46702684-46702582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
463-554
               

               
Cow position:
               
chr4:8083812-8083722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               
Show alignments to all cow chromosomes.