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Cow genome map

           
Conread name:
           
Pig2-108O01
        

               
Conread position:
               
232-499
               

               
Cow position:
               
chr20:17369936-17370217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
244-521
               

               
Cow position:
               
chr20:36779426-36779717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
245-533
               

               
Cow position:
               
chr20:11188530-11188797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
246-533
               

               
Cow position:
               
chr20:38551662-38551375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
247-498
               

               
Cow position:
               
chr20:19328688-19328423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
250-533
               

               
Cow position:
               
chr20:32847628-32847342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
251-457
               

               
Cow position:
               
chr20:17841029-17840821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
251-487
               

               
Cow position:
               
chr20:7622683-7622935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 194
               

               
Conread position:
               
252-477
               

               
Cow position:
               
chr20:31468372-31468605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
252-533
               

               
Cow position:
               
chr20:35146298-35146023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
253-446
               

               
Cow position:
               
chr20:41313662-41313474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
253-477
               

               
Cow position:
               
chr20:25464766-25464989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
253-485
               

               
Cow position:
               
chr20:28935355-28935590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
255-498
               

               
Cow position:
               
chr20:37609903-37609657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
256-530
               

               
Cow position:
               
chr20:8555996-8556268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
258-500
               

               
Cow position:
               
chr20:21941705-21941467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
259-399
               

               
Cow position:
               
chr20:24522618-24522481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
259-458
               

               
Cow position:
               
chr20:10956585-10956389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
259-488
               

               
Cow position:
               
chr20:3035617-3035378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr20:26850503-26850788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
259-531
               

               
Cow position:
               
chr20:24070075-24069807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
259-531
               

               
Cow position:
               
chr20:35742048-35741769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
260-458
               

               
Cow position:
               
chr20:15496691-15496875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
260-532
               

               
Cow position:
               
chr20:29845329-29845052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
260-533
               

               
Cow position:
               
chr20:36741739-36741477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
261-465
               

               
Cow position:
               
chr20:21279656-21279455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
263-433
               

               
Cow position:
               
chr20:32067214-32067393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
263-523
               

               
Cow position:
               
chr20:31739944-31740209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
265-433
               

               
Cow position:
               
chr20:37166217-37166051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
266-475
               

               
Cow position:
               
chr20:600567-600364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
266-476
               

               
Cow position:
               
chr20:13617481-13617283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
266-533
               

               
Cow position:
               
chr20:33434890-33435165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
267-517
               

               
Cow position:
               
chr20:34083991-34083733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
268-531
               

               
Cow position:
               
chr20:38090184-38089915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr20:3502766-3502618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
270-519
               

               
Cow position:
               
chr20:39417636-39417885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
270-524
               

               
Cow position:
               
chr20:33067093-33067350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
100, 251
               

               
Conread position:
               
271-472
               

               
Cow position:
               
chr20:21210290-21210091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
272-476
               

               
Cow position:
               
chr20:5268577-5268787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
272-488
               

               
Cow position:
               
chr20:37358126-37357901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
11, 212
               

               
Conread position:
               
272-517
               

               
Cow position:
               
chr20:41704428-41704180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 217
               

               
Conread position:
               
272-533
               

               
Cow position:
               
chr20:38818252-38818007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
273-429
               

               
Cow position:
               
chr20:21169507-21169658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr20:6054243-6054500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
273-525
               

               
Cow position:
               
chr20:28982959-28982710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
274-441
               

               
Cow position:
               
chr20:5172871-5172704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
274-443
               

               
Cow position:
               
chr20:18500793-18500617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
274-485
               

               
Cow position:
               
chr20:8021399-8021174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
274-518
               

               
Cow position:
               
chr20:42166528-42166764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
274-530
               

               
Cow position:
               
chr20:5814828-5814572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr20:23549016-23548746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr20:25953528-25953267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr20:28594553-28594284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr20:34097685-34097956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
276-411
               

               
Cow position:
               
chr20:19899565-19899431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
276-417
               

               
Cow position:
               
chr20:19622986-19623128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
276-458
               

               
Cow position:
               
chr20:4931338-4931161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
276-461
               

               
Cow position:
               
chr20:24491767-24491956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
144, 113
               

               
Conread position:
               
276-470
               

               
Cow position:
               
chr20:21018681-21018487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
276-488
               

               
Cow position:
               
chr20:11741056-11741260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr20:2316167-2316383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
276-493
               

               
Cow position:
               
chr20:27315235-27315022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
276-497
               

               
Cow position:
               
chr20:30639517-30639747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
276-506
               

               
Cow position:
               
chr20:25021692-25021454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
276-520
               

               
Cow position:
               
chr20:35444847-35445090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
276-524
               

               
Cow position:
               
chr20:30744460-30744712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
276-525
               

               
Cow position:
               
chr20:34108347-34108119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
276-525
               

               
Cow position:
               
chr20:34251409-34251663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
276-527
               

               
Cow position:
               
chr20:14490504-14490257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
276-531
               

               
Cow position:
               
chr20:12581697-12581953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
276-531
               

               
Cow position:
               
chr20:16818677-16818420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
276-532
               

               
Cow position:
               
chr20:7756380-7756624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
225, 5
               

               
Conread position:
               
276-532
               

               
Cow position:
               
chr20:38515049-38514781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
101, 147
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr20:6603289-6603041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
177, 35
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr20:14980247-14980511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
278-438
               

               
Cow position:
               
chr20:35605461-35605302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
278-477
               

               
Cow position:
               
chr20:20459851-20459648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
278-533
               

               
Cow position:
               
chr20:23540914-23541156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
280-444
               

               
Cow position:
               
chr20:11368108-11368273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
280-480
               

               
Cow position:
               
chr20:38934809-38935002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
281-400
               

               
Cow position:
               
chr20:6048309-6048433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
281-446
               

               
Cow position:
               
chr20:21344724-21344554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
281-462
               

               
Cow position:
               
chr20:297750-297936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
281-470
               

               
Cow position:
               
chr20:35589429-35589621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
281-471
               

               
Cow position:
               
chr20:34348957-34349152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 171
               

               
Conread position:
               
281-478
               

               
Cow position:
               
chr20:35310584-35310383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
281-485
               

               
Cow position:
               
chr20:32636079-32636279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
281-485
               

               
Cow position:
               
chr20:37273249-37273046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
281-496
               

               
Cow position:
               
chr20:23358239-23358454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
281-499
               

               
Cow position:
               
chr20:29990194-29990413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
281-511
               

               
Cow position:
               
chr20:28899339-28899116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
183, 83
               

               
Conread position:
               
281-518
               

               
Cow position:
               
chr20:15118534-15118291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 232
               

               
Conread position:
               
281-520
               

               
Cow position:
               
chr20:747185-746957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
281-522
               

               
Cow position:
               
chr20:16548019-16548267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
281-522
               

               
Cow position:
               
chr20:26996788-26996542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
281-522
               

               
Cow position:
               
chr20:39398736-39398492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
281-530
               

               
Cow position:
               
chr20:14433164-14433418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 242
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr20:11548475-11548718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr20:19237329-19237081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr20:11002658-11002397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr20:12995739-12996009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr20:28605461-28605209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
243, 176
               

               
Conread position:
               
282-386
               

               
Cow position:
               
chr20:15199233-15199131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
282-398
               

               
Cow position:
               
chr20:24310687-24310805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
282-418
               

               
Cow position:
               
chr20:5024713-5024850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
282-468
               

               
Cow position:
               
chr20:27323522-27323331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
282-490
               

               
Cow position:
               
chr20:7155430-7155224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
282-499
               

               
Cow position:
               
chr20:24097249-24097035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
282-499
               

               
Cow position:
               
chr20:24314783-24314999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
282-526
               

               
Cow position:
               
chr20:13023247-13023490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
18, 179
               

               
Conread position:
               
282-532
               

               
Cow position:
               
chr20:25972135-25972395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr20:3141830-3141574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr20:5365182-5364928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr20:10200605-10200344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr20:11359385-11359628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr20:17251974-17251717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 196
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr20:24712095-24711837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
283-402
               

               
Cow position:
               
chr20:15489542-15489424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
284-516
               

               
Cow position:
               
chr20:15766369-15766128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 237
               

               
Conread position:
               
284-526
               

               
Cow position:
               
chr20:3255286-3255044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
117, 200
               

               
Conread position:
               
285-469
               

               
Cow position:
               
chr20:18763390-18763203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr20:41977891-41977709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
285-522
               

               
Cow position:
               
chr20:23384546-23384310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
285-523
               

               
Cow position:
               
chr20:11043209-11043464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
285-525
               

               
Cow position:
               
chr20:14620060-14620295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
285-527
               

               
Cow position:
               
chr20:35207952-35208200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
285-530
               

               
Cow position:
               
chr20:8308254-8308021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
285-532
               

               
Cow position:
               
chr20:6248349-6248601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr20:5078886-5078625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr20:21428408-21428161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr20:39016618-39016875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
286-433
               

               
Cow position:
               
chr20:14460635-14460481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
286-444
               

               
Cow position:
               
chr20:34881154-34881308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
286-454
               

               
Cow position:
               
chr20:20202469-20202298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
286-488
               

               
Cow position:
               
chr20:35442033-35442237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
286-503
               

               
Cow position:
               
chr20:7737984-7738202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
215, 0
               

               
Conread position:
               
286-518
               

               
Cow position:
               
chr20:40422848-40423089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
286-525
               

               
Cow position:
               
chr20:7441893-7442123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
286-530
               

               
Cow position:
               
chr20:4206204-4205970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
215, 25
               

               
Conread position:
               
286-532
               

               
Cow position:
               
chr20:30710394-30710636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr20:1824382-1824631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr20:7438607-7438853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
236, 83
               

               
Conread position:
               
287-399
               

               
Cow position:
               
chr20:1999633-1999519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
287-402
               

               
Cow position:
               
chr20:24995382-24995497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
287-423
               

               
Cow position:
               
chr20:1220315-1220445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-433
               

               
Cow position:
               
chr20:40578425-40578567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
287-434
               

               
Cow position:
               
chr20:32174744-32174605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
287-435
               

               
Cow position:
               
chr20:29755026-29754874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
287-444
               

               
Cow position:
               
chr20:23506184-23506024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
287-444
               

               
Cow position:
               
chr20:26090712-26090866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
287-451
               

               
Cow position:
               
chr20:23428298-23428460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
287-459
               

               
Cow position:
               
chr20:6473983-6473807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
287-461
               

               
Cow position:
               
chr20:16977588-16977772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
287-467
               

               
Cow position:
               
chr20:38061524-38061701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
287-468
               

               
Cow position:
               
chr20:19919570-19919751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
287-469
               

               
Cow position:
               
chr20:9379732-9379555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
287-471
               

               
Cow position:
               
chr20:22851726-22851540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
287-480
               

               
Cow position:
               
chr20:14755595-14755787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
287-484
               

               
Cow position:
               
chr20:9033966-9034167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
287-516
               

               
Cow position:
               
chr20:12420370-12420601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
287-519
               

               
Cow position:
               
chr20:32583570-32583331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
287-520
               

               
Cow position:
               
chr20:4755586-4755821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
287-520
               

               
Cow position:
               
chr20:8702682-8702902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-520
               

               
Cow position:
               
chr20:13034084-13034305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
226, 138
               

               
Conread position:
               
287-524
               

               
Cow position:
               
chr20:8547310-8547076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
287-525
               

               
Cow position:
               
chr20:38925600-38925845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 119
               

               
Conread position:
               
287-527
               

               
Cow position:
               
chr20:14759425-14759660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 90
               

               
Conread position:
               
287-529
               

               
Cow position:
               
chr20:13269863-13269624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
98, 154
               

               
Conread position:
               
287-529
               

               
Cow position:
               
chr20:20158379-20158140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-530
               

               
Cow position:
               
chr20:28818687-28818925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 140
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr20:2819797-2819547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 221
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr20:9376711-9376473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr20:28249431-28249185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
287-532
               

               
Cow position:
               
chr20:11045923-11045680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 117
               

               
Conread position:
               
287-532
               

               
Cow position:
               
chr20:32709191-32709449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr20:21345688-21345429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr20:40177493-40177245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
288-399
               

               
Cow position:
               
chr20:17764874-17764982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
288-456
               

               
Cow position:
               
chr20:23879859-23880030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
288-459
               

               
Cow position:
               
chr20:22012636-22012470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
288-471
               

               
Cow position:
               
chr20:19746220-19746033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
288-472
               

               
Cow position:
               
chr20:5978596-5978784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr20:21721467-21721240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
288-515
               

               
Cow position:
               
chr20:7416913-7417149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
288-521
               

               
Cow position:
               
chr20:27407647-27407873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
288-524
               

               
Cow position:
               
chr20:22235546-22235314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
288-531
               

               
Cow position:
               
chr20:14283172-14282924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 234
               

               
Conread position:
               
288-532
               

               
Cow position:
               
chr20:41089545-41089794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
288-533
               

               
Cow position:
               
chr20:23286083-23286331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 121
               

               
Conread position:
               
289-394
               

               
Cow position:
               
chr20:25865885-25865991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
289-470
               

               
Cow position:
               
chr20:8679414-8679599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
289-473
               

               
Cow position:
               
chr20:8245963-8245782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
289-484
               

               
Cow position:
               
chr20:11499250-11499061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
289-492
               

               
Cow position:
               
chr20:13805563-13805358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
146, 85
               

               
Conread position:
               
289-494
               

               
Cow position:
               
chr20:26040850-26041059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
289-497
               

               
Cow position:
               
chr20:21325572-21325362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
289-514
               

               
Cow position:
               
chr20:40303635-40303864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 180
               

               
Conread position:
               
289-527
               

               
Cow position:
               
chr20:20984244-20983998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
289-529
               

               
Cow position:
               
chr20:11101649-11101416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
235, 69
               

               
Conread position:
               
289-531
               

               
Cow position:
               
chr20:25351180-25351404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
232, 10
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr20:6240273-6240520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr20:9266853-9267106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr20:14572130-14572362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 85
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr20:29805431-29805660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
230, 10
               

               
Conread position:
               
290-431
               

               
Cow position:
               
chr20:7927079-7926938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
290-471
               

               
Cow position:
               
chr20:5078523-5078334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
290-476
               

               
Cow position:
               
chr20:36842833-36842633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 160
               

               
Conread position:
               
290-497
               

               
Cow position:
               
chr20:39743549-39743346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
290-519
               

               
Cow position:
               
chr20:3599156-3599381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
290-528
               

               
Cow position:
               
chr20:14807129-14806892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
290-529
               

               
Cow position:
               
chr20:15548647-15548894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
290-530
               

               
Cow position:
               
chr20:23846420-23846663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
290-531
               

               
Cow position:
               
chr20:4781834-4781602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
188, 69
               

               
Conread position:
               
290-531
               

               
Cow position:
               
chr20:12534505-12534739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
290-532
               

               
Cow position:
               
chr20:18379623-18379380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
291-381
               

               
Cow position:
               
chr20:26125929-26126019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
291-395
               

               
Cow position:
               
chr20:3606661-3606765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
291-433
               

               
Cow position:
               
chr20:38700883-38701023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
291-469
               

               
Cow position:
               
chr20:15760323-15760509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
291-484
               

               
Cow position:
               
chr20:22923159-22922967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
291-484
               

               
Cow position:
               
chr20:31845044-31845236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
291-499
               

               
Cow position:
               
chr20:32865958-32866152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
291-514
               

               
Cow position:
               
chr20:34202886-34202653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
291-519
               

               
Cow position:
               
chr20:4334293-4334516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 79
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr20:4945006-4945238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
291-523
               

               
Cow position:
               
chr20:10209051-10208818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
291-527
               

               
Cow position:
               
chr20:20967565-20967326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
291-530
               

               
Cow position:
               
chr20:4998864-4999111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr20:7624014-7624247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr20:8578500-8578248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
292-391
               

               
Cow position:
               
chr20:2828019-2827919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
292-469
               

               
Cow position:
               
chr20:8442211-8442391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
292-470
               

               
Cow position:
               
chr20:5991584-5991414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
292-499
               

               
Cow position:
               
chr20:21291912-21291694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
292-509
               

               
Cow position:
               
chr20:34221725-34221503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
292-509
               

               
Cow position:
               
chr20:42309724-42309946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
292-522
               

               
Cow position:
               
chr20:20124788-20125021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
292-523
               

               
Cow position:
               
chr20:23792843-23792616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
292-527
               

               
Cow position:
               
chr20:20099359-20099595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
69, 7
               

               
Conread position:
               
292-531
               

               
Cow position:
               
chr20:20892432-20892663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
292-532
               

               
Cow position:
               
chr20:22065304-22065073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr20:5645019-5644788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
223, 7
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr20:12126058-12126304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr20:15568720-15568945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
293-396
               

               
Cow position:
               
chr20:6890986-6890883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-443
               

               
Cow position:
               
chr20:26424650-26424496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
293-471
               

               
Cow position:
               
chr20:9730247-9730059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
293-479
               

               
Cow position:
               
chr20:4891876-4892065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
293-481
               

               
Cow position:
               
chr20:1640225-1640401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-485
               

               
Cow position:
               
chr20:19201776-19201579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
293-485
               

               
Cow position:
               
chr20:23935935-23936136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
293-486
               

               
Cow position:
               
chr20:10236060-10235878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-488
               

               
Cow position:
               
chr20:24883118-24883322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
293-490
               

               
Cow position:
               
chr20:33076575-33076780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
293-491
               

               
Cow position:
               
chr20:19834589-19834788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr20:3564395-3564189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
92, 6
               

               
Conread position:
               
293-517
               

               
Cow position:
               
chr20:5950397-5950626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
293-519
               

               
Cow position:
               
chr20:20934491-20934718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
89, 202
               

               
Conread position:
               
293-523
               

               
Cow position:
               
chr20:15530102-15529870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
293-524
               

               
Cow position:
               
chr20:33623316-33623543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
293-527
               

               
Cow position:
               
chr20:35193002-35192778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
293-531
               

               
Cow position:
               
chr20:398070-398303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-531
               

               
Cow position:
               
chr20:13829502-13829268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
293-532
               

               
Cow position:
               
chr20:5009974-5009735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
293-533
               

               
Cow position:
               
chr20:16941040-16941289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
294-425
               

               
Cow position:
               
chr20:17515400-17515526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
294-470
               

               
Cow position:
               
chr20:38872756-38872938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 112
               

               
Conread position:
               
294-498
               

               
Cow position:
               
chr20:19635937-19636141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
294-515
               

               
Cow position:
               
chr20:31148392-31148181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 5
               

               
Conread position:
               
294-519
               

               
Cow position:
               
chr20:5703713-5703485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
294-521
               

               
Cow position:
               
chr20:17470951-17470741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
294-526
               

               
Cow position:
               
chr20:14917512-14917293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
294-527
               

               
Cow position:
               
chr20:33532532-33532308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
207, 62
               

               
Conread position:
               
294-533
               

               
Cow position:
               
chr20:6903536-6903316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
294-533
               

               
Cow position:
               
chr20:7658983-7659217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
294-533
               

               
Cow position:
               
chr20:11135510-11135761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
92, 234
               

               
Conread position:
               
295-459
               

               
Cow position:
               
chr20:4789620-4789777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
295-461
               

               
Cow position:
               
chr20:26387697-26387533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
296-522
               

               
Cow position:
               
chr20:37919136-37919359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
296-530
               

               
Cow position:
               
chr20:23850861-23850626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
298-498
               

               
Cow position:
               
chr20:381896-382096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
299-469
               

               
Cow position:
               
chr20:34848140-34847970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
299-470
               

               
Cow position:
               
chr20:17544864-17544687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr20:28441556-28441356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
299-513
               

               
Cow position:
               
chr20:36312274-36312488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
299-518
               

               
Cow position:
               
chr20:11751891-11751669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
299-520
               

               
Cow position:
               
chr20:25009396-25009620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
299-529
               

               
Cow position:
               
chr20:40511535-40511753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
219, 65
               

               
Conread position:
               
299-531
               

               
Cow position:
               
chr20:14880023-14879791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
299-533
               

               
Cow position:
               
chr20:3148918-3148684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
299-533
               

               
Cow position:
               
chr20:11008410-11008170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
300-438
               

               
Cow position:
               
chr20:18423912-18423775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
300-533
               

               
Cow position:
               
chr20:20898353-20898590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
300-533
               

               
Cow position:
               
chr20:25161895-25162128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 43
               

               
Conread position:
               
301-467
               

               
Cow position:
               
chr20:24657425-24657258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
301-506
               

               
Cow position:
               
chr20:39268847-39269059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
302-443
               

               
Cow position:
               
chr20:16566523-16566387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
302-533
               

               
Cow position:
               
chr20:41473516-41473740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
303-454
               

               
Cow position:
               
chr20:13512889-13512738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
303-533
               

               
Cow position:
               
chr20:34596870-34597099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
303-533
               

               
Cow position:
               
chr20:34786709-34786946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 167
               

               
Conread position:
               
305-484
               

               
Cow position:
               
chr20:21535507-21535684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
305-503
               

               
Cow position:
               
chr20:7425967-7426168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
305-509
               

               
Cow position:
               
chr20:16291922-16291712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
305-519
               

               
Cow position:
               
chr20:13752444-13752237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
306-486
               

               
Cow position:
               
chr20:26905892-26905722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
306-523
               

               
Cow position:
               
chr20:10188505-10188286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
306-524
               

               
Cow position:
               
chr20:2298565-2298777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
306-533
               

               
Cow position:
               
chr20:30119362-30119569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
306-533
               

               
Cow position:
               
chr20:33976719-33976485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
307-511
               

               
Cow position:
               
chr20:18488156-18487948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 178
               

               
Conread position:
               
307-522
               

               
Cow position:
               
chr20:15822779-15822561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
307-533
               

               
Cow position:
               
chr20:5702951-5702723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
308-447
               

               
Cow position:
               
chr20:12033398-12033535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
308-468
               

               
Cow position:
               
chr20:6849123-6848960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
310-532
               

               
Cow position:
               
chr20:9433808-9433588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
311-487
               

               
Cow position:
               
chr20:20590079-20590255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
311-492
               

               
Cow position:
               
chr20:14607688-14607870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr20:354673-354883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
312-519
               

               
Cow position:
               
chr20:1139541-1139753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr20:25474779-25474618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
313-474
               

               
Cow position:
               
chr20:31746413-31746577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
313-533
               

               
Cow position:
               
chr20:6424177-6423972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
314-494
               

               
Cow position:
               
chr20:36671198-36671393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
314-531
               

               
Cow position:
               
chr20:8429964-8429751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
316-509
               

               
Cow position:
               
chr20:22959125-22959322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
318-517
               

               
Cow position:
               
chr20:36806739-36806537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
319-521
               

               
Cow position:
               
chr20:31927243-31927456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
319-531
               

               
Cow position:
               
chr20:34849576-34849795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
319-532
               

               
Cow position:
               
chr20:18831663-18831873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 183
               

               
Conread position:
               
320-525
               

               
Cow position:
               
chr20:10245840-10246045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
74, 78
               

               
Conread position:
               
324-462
               

               
Cow position:
               
chr20:32555495-32555361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
324-529
               

               
Cow position:
               
chr20:2742922-2743134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
327-524
               

               
Cow position:
               
chr20:12239477-12239672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 124
               

               
Conread position:
               
330-524
               

               
Cow position:
               
chr20:28067226-28067410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
331-473
               

               
Cow position:
               
chr20:34467747-34467891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
331-533
               

               
Cow position:
               
chr20:6372350-6372560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
331-533
               

               
Cow position:
               
chr20:13652165-13652365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
331-533
               

               
Cow position:
               
chr20:21929107-21928906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
332-473
               

               
Cow position:
               
chr20:11822682-11822539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
332-519
               

               
Cow position:
               
chr20:40782171-40781975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
332-531
               

               
Cow position:
               
chr20:20203418-20203219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
333-533
               

               
Cow position:
               
chr20:20739088-20739285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
333-533
               

               
Cow position:
               
chr20:38578565-38578763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
186, 21
               

               
Conread position:
               
334-492
               

               
Cow position:
               
chr20:630726-630566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
334-520
               

               
Cow position:
               
chr20:19060638-19060824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
334-531
               

               
Cow position:
               
chr20:32463323-32463518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 134
               

               
Conread position:
               
335-526
               

               
Cow position:
               
chr20:22485063-22484868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
336-460
               

               
Cow position:
               
chr20:3513004-3512883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
341-451
               

               
Cow position:
               
chr20:9100472-9100361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
341-533
               

               
Cow position:
               
chr20:17100553-17100363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
342-531
               

               
Cow position:
               
chr20:13025425-13025611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
350-533
               

               
Cow position:
               
chr20:6890891-6890716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
353-520
               

               
Cow position:
               
chr20:13943938-13943778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
353-533
               

               
Cow position:
               
chr20:21714948-21714757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
354-520
               

               
Cow position:
               
chr20:11550548-11550383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
354-529
               

               
Cow position:
               
chr20:4332311-4332136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr20:19363184-19363362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
166, 54
               

               
Conread position:
               
357-533
               

               
Cow position:
               
chr20:10772383-10772205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
359-524
               

               
Cow position:
               
chr20:17846134-17845970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
359-531
               

               
Cow position:
               
chr20:13983531-13983358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
359-533
               

               
Cow position:
               
chr20:23506294-23506468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
360-467
               

               
Cow position:
               
chr20:37228910-37229018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
360-503
               

               
Cow position:
               
chr20:26723508-26723649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
360-509
               

               
Cow position:
               
chr20:31799030-31799179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-516
               

               
Cow position:
               
chr20:15565656-15565810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
360-516
               

               
Cow position:
               
chr20:21815736-21815578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
360-518
               

               
Cow position:
               
chr20:12085264-12085418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
360-521
               

               
Cow position:
               
chr20:22030492-22030334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
360-523
               

               
Cow position:
               
chr20:23678542-23678706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 155
               

               
Conread position:
               
360-526
               

               
Cow position:
               
chr20:33438807-33438972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
360-527
               

               
Cow position:
               
chr20:35365215-35365052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
360-529
               

               
Cow position:
               
chr20:19751480-19751312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
360-529
               

               
Cow position:
               
chr20:35460361-35460536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
360-529
               

               
Cow position:
               
chr20:36633985-36633817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
360-531
               

               
Cow position:
               
chr20:7363136-7362968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
360-532
               

               
Cow position:
               
chr20:14100264-14100431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr20:2169550-2169722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr20:20056313-20056483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
125, 80
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr20:21761950-21761774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr20:23064662-23064829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr20:39728624-39728450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr20:40692239-40692057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
361-522
               

               
Cow position:
               
chr20:11038748-11038592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
362-481
               

               
Cow position:
               
chr20:20312339-20312458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
362-519
               

               
Cow position:
               
chr20:40158071-40157914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
362-524
               

               
Cow position:
               
chr20:10818070-10818232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
155, 16
               

               
Conread position:
               
363-481
               

               
Cow position:
               
chr20:15515270-15515387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
363-518
               

               
Cow position:
               
chr20:15589213-15589056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
363-523
               

               
Cow position:
               
chr20:9412658-9412498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
363-524
               

               
Cow position:
               
chr20:18392101-18392255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
363-533
               

               
Cow position:
               
chr20:23870649-23870819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
156, 117
               

               
Conread position:
               
364-519
               

               
Cow position:
               
chr20:42458687-42458842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
365-533
               

               
Cow position:
               
chr20:34777350-34777181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
365-533
               

               
Cow position:
               
chr20:35797778-35797610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
367-533
               

               
Cow position:
               
chr20:5636647-5636484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 110
               

               
Conread position:
               
368-526
               

               
Cow position:
               
chr20:38768298-38768456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
150, 92
               

               
Conread position:
               
370-524
               

               
Cow position:
               
chr20:4002258-4002106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
370-524
               

               
Cow position:
               
chr20:8912334-8912490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
370-531
               

               
Cow position:
               
chr20:6096332-6096490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
372-506
               

               
Cow position:
               
chr20:36207975-36207842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
372-529
               

               
Cow position:
               
chr20:11481974-11482130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
373-533
               

               
Cow position:
               
chr20:19459505-19459666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
373-533
               

               
Cow position:
               
chr20:30888196-30888033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
376-533
               

               
Cow position:
               
chr20:14540501-14540343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
376-533
               

               
Cow position:
               
chr20:29084226-29084388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
377-529
               

               
Cow position:
               
chr20:33363673-33363519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
378-476
               

               
Cow position:
               
chr20:18396080-18395982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-524
               

               
Cow position:
               
chr20:1576252-1576105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
378-531
               

               
Cow position:
               
chr20:22978482-22978329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-533
               

               
Cow position:
               
chr20:361035-361183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
378-533
               

               
Cow position:
               
chr20:580765-580922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
378-533
               

               
Cow position:
               
chr20:24902138-24902297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
378-533
               

               
Cow position:
               
chr20:31323942-31323788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
379-518
               

               
Cow position:
               
chr20:8817337-8817476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-521
               

               
Cow position:
               
chr20:26077514-26077655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
379-530
               

               
Cow position:
               
chr20:28955546-28955698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
382-533
               

               
Cow position:
               
chr20:36040626-36040473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
386-531
               

               
Cow position:
               
chr20:6358767-6358620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
397-533
               

               
Cow position:
               
chr20:1009570-1009706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-531
               

               
Cow position:
               
chr20:23103335-23103223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               
Show alignments to all cow chromosomes.