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Cow genome map

           
Conread name:
           
Pig2-108O01
        

               
Conread position:
               
233-524
               

               
Cow position:
               
chr25:7750703-7750416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
234-533
               

               
Cow position:
               
chr25:30619320-30619020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
235-517
               

               
Cow position:
               
chr25:5637133-5637414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
236-443
               

               
Cow position:
               
chr25:9845957-9845758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
244-533
               

               
Cow position:
               
chr25:17474265-17474557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
247-485
               

               
Cow position:
               
chr25:36370067-36369822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
247-485
               

               
Cow position:
               
chr25:36375758-36375513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
247-532
               

               
Cow position:
               
chr25:33663663-33663950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
249-454
               

               
Cow position:
               
chr25:15999309-15999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
251-473
               

               
Cow position:
               
chr25:32667015-32667255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 232
               

               
Conread position:
               
252-530
               

               
Cow position:
               
chr25:36073760-36074038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
252-531
               

               
Cow position:
               
chr25:35338951-35339232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
118, 264
               

               
Conread position:
               
253-407
               

               
Cow position:
               
chr25:22577073-22577224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
253-476
               

               
Cow position:
               
chr25:17725271-17725056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
253-533
               

               
Cow position:
               
chr25:22203448-22203732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 196
               

               
Conread position:
               
254-527
               

               
Cow position:
               
chr25:35109039-35109309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr25:7311158-7311385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
256-460
               

               
Cow position:
               
chr25:21547396-21547185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
258-469
               

               
Cow position:
               
chr25:32745565-32745357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
258-485
               

               
Cow position:
               
chr25:15573627-15573391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
259-458
               

               
Cow position:
               
chr25:20162253-20162460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
259-516
               

               
Cow position:
               
chr25:36717149-36716893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr25:20664043-20664324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
259-531
               

               
Cow position:
               
chr25:3345967-3346238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
13, 197
               

               
Conread position:
               
260-461
               

               
Cow position:
               
chr25:20063492-20063301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
260-472
               

               
Cow position:
               
chr25:22768447-22768234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
261-527
               

               
Cow position:
               
chr25:8226336-8226065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
262-472
               

               
Cow position:
               
chr25:28662337-28662126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
264-443
               

               
Cow position:
               
chr25:30709121-30709303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
266-480
               

               
Cow position:
               
chr25:5791491-5791709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
267-523
               

               
Cow position:
               
chr25:22298852-22298602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
268-499
               

               
Cow position:
               
chr25:2362045-2361826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
268-524
               

               
Cow position:
               
chr25:33457947-33457696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
269-459
               

               
Cow position:
               
chr25:38987379-38987200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
269-533
               

               
Cow position:
               
chr25:22731048-22730784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
270-469
               

               
Cow position:
               
chr25:24147733-24147927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
270-521
               

               
Cow position:
               
chr25:26136599-26136856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 136
               

               
Conread position:
               
271-476
               

               
Cow position:
               
chr25:1982765-1982970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
271-533
               

               
Cow position:
               
chr25:26679447-26679183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 256
               

               
Conread position:
               
271-533
               

               
Cow position:
               
chr25:30817112-30816843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
272-533
               

               
Cow position:
               
chr25:4681424-4681186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
273-428
               

               
Cow position:
               
chr25:7864546-7864393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
273-471
               

               
Cow position:
               
chr25:22565749-22565941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
273-483
               

               
Cow position:
               
chr25:18491254-18491043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
273-532
               

               
Cow position:
               
chr25:28597386-28597656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
274-386
               

               
Cow position:
               
chr25:22261063-22261179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
274-475
               

               
Cow position:
               
chr25:22373270-22373477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
274-495
               

               
Cow position:
               
chr25:8347872-8347645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
274-499
               

               
Cow position:
               
chr25:20203122-20202902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
274-507
               

               
Cow position:
               
chr25:40682952-40682719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
274-518
               

               
Cow position:
               
chr25:6473859-6474117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
274-531
               

               
Cow position:
               
chr25:12305493-12305235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
274-531
               

               
Cow position:
               
chr25:22315422-22315162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr25:18156069-18156331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr25:24202793-24203047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
276-386
               

               
Cow position:
               
chr25:7012942-7012832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-443
               

               
Cow position:
               
chr25:7185059-7185231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
276-443
               

               
Cow position:
               
chr25:7551155-7551322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
276-445
               

               
Cow position:
               
chr25:13565120-13565280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
276-469
               

               
Cow position:
               
chr25:37965479-37965276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
276-473
               

               
Cow position:
               
chr25:3141717-3141518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
276-497
               

               
Cow position:
               
chr25:3992995-3992776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
102, 179
               

               
Conread position:
               
276-525
               

               
Cow position:
               
chr25:11051736-11051494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr25:8345786-8346047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 130
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr25:12098053-12097796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr25:12755275-12755534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr25:24573274-24573022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
277-443
               

               
Cow position:
               
chr25:34990062-34990226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
277-469
               

               
Cow position:
               
chr25:14457367-14457168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 130
               

               
Conread position:
               
277-518
               

               
Cow position:
               
chr25:10364137-10364364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
277-519
               

               
Cow position:
               
chr25:26224822-26225060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
117, 95
               

               
Conread position:
               
277-533
               

               
Cow position:
               
chr25:13768172-13767924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
247, 47
               

               
Conread position:
               
277-533
               

               
Cow position:
               
chr25:24863082-24862832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
277-533
               

               
Cow position:
               
chr25:25716860-25716607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
278-461
               

               
Cow position:
               
chr25:4157031-4157219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
278-528
               

               
Cow position:
               
chr25:19069620-19069872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
279-466
               

               
Cow position:
               
chr25:18934426-18934613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
279-508
               

               
Cow position:
               
chr25:23519824-23520048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
280-395
               

               
Cow position:
               
chr25:22642485-22642369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
280-499
               

               
Cow position:
               
chr25:36872844-36873067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
280-522
               

               
Cow position:
               
chr25:21191687-21191455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
280-532
               

               
Cow position:
               
chr25:7726878-7726620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 249
               

               
Conread position:
               
281-378
               

               
Cow position:
               
chr25:14212615-14212713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
281-390
               

               
Cow position:
               
chr25:17708014-17707908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
281-397
               

               
Cow position:
               
chr25:7358455-7358573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
281-433
               

               
Cow position:
               
chr25:2415006-2414852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
281-450
               

               
Cow position:
               
chr25:20788618-20788784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
113, 95
               

               
Conread position:
               
281-455
               

               
Cow position:
               
chr25:8410824-8411001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
281-468
               

               
Cow position:
               
chr25:1802823-1802631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
281-470
               

               
Cow position:
               
chr25:20085786-20085595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
281-474
               

               
Cow position:
               
chr25:35624660-35624865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
281-476
               

               
Cow position:
               
chr25:36020619-36020422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
281-479
               

               
Cow position:
               
chr25:21287324-21287517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
281-499
               

               
Cow position:
               
chr25:11857776-11857997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
99, 209
               

               
Conread position:
               
281-505
               

               
Cow position:
               
chr25:12206749-12206519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
281-508
               

               
Cow position:
               
chr25:33101404-33101625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
281-518
               

               
Cow position:
               
chr25:12609552-12609313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
281-519
               

               
Cow position:
               
chr25:17919190-17918943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
281-519
               

               
Cow position:
               
chr25:34378904-34379136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
281-520
               

               
Cow position:
               
chr25:13621153-13621388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
281-520
               

               
Cow position:
               
chr25:40904620-40904862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
281-522
               

               
Cow position:
               
chr25:33686476-33686718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
281-524
               

               
Cow position:
               
chr25:14833459-14833700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
281-524
               

               
Cow position:
               
chr25:20523029-20523269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
281-524
               

               
Cow position:
               
chr25:35348115-35347868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
281-525
               

               
Cow position:
               
chr25:10407203-10407455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
281-526
               

               
Cow position:
               
chr25:24984217-24984448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
281-528
               

               
Cow position:
               
chr25:22753104-22752850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
281-530
               

               
Cow position:
               
chr25:17119953-17119703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr25:9002881-9002630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr25:15565779-15566050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr25:22348248-22348508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr25:5846595-5846853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 236
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr25:11585739-11585473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr25:26089618-26089859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 20
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr25:30462112-30462348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
282-437
               

               
Cow position:
               
chr25:26643020-26642858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
282-475
               

               
Cow position:
               
chr25:7403128-7403328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
282-503
               

               
Cow position:
               
chr25:28667842-28668067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
283-520
               

               
Cow position:
               
chr25:20076689-20076465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
284-454
               

               
Cow position:
               
chr25:10303734-10303568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
284-520
               

               
Cow position:
               
chr25:19478897-19478643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
284-524
               

               
Cow position:
               
chr25:18929000-18929228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
284-531
               

               
Cow position:
               
chr25:18810538-18810301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
284-533
               

               
Cow position:
               
chr25:1838451-1838193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 248
               

               
Conread position:
               
285-416
               

               
Cow position:
               
chr25:15463161-15463298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
285-418
               

               
Cow position:
               
chr25:20223546-20223678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
285-420
               

               
Cow position:
               
chr25:18664112-18664250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
285-433
               

               
Cow position:
               
chr25:28939931-28940086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
285-470
               

               
Cow position:
               
chr25:27916207-27916033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
285-474
               

               
Cow position:
               
chr25:24115110-24115302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
285-518
               

               
Cow position:
               
chr25:18201723-18201953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
285-521
               

               
Cow position:
               
chr25:11780469-11780247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr25:26087726-26087474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 167
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr25:26701227-26700987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr25:35762793-35762545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
286-385
               

               
Cow position:
               
chr25:15218363-15218265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
286-447
               

               
Cow position:
               
chr25:21082202-21082366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
286-462
               

               
Cow position:
               
chr25:33373782-33373960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
286-466
               

               
Cow position:
               
chr25:19106607-19106440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
286-485
               

               
Cow position:
               
chr25:11060340-11060135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
286-490
               

               
Cow position:
               
chr25:14944923-14945124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr25:26524166-26523948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr25:41150760-41150975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
286-524
               

               
Cow position:
               
chr25:18720923-18721156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 16
               

               
Conread position:
               
286-532
               

               
Cow position:
               
chr25:3373181-3373421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
286-532
               

               
Cow position:
               
chr25:33555813-33555565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr25:11316107-11315862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr25:12807244-12806999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 19
               

               
Conread position:
               
287-403
               

               
Cow position:
               
chr25:16491301-16491183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
287-423
               

               
Cow position:
               
chr25:2195187-2195317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
287-425
               

               
Cow position:
               
chr25:22917294-22917431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
287-459
               

               
Cow position:
               
chr25:36070851-36070680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
287-460
               

               
Cow position:
               
chr25:15305884-15305706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
287-462
               

               
Cow position:
               
chr25:12223767-12223597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
287-466
               

               
Cow position:
               
chr25:26989403-26989219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
287-469
               

               
Cow position:
               
chr25:33100776-33100594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
287-469
               

               
Cow position:
               
chr25:33776264-33776074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
287-470
               

               
Cow position:
               
chr25:19832203-19832020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
287-473
               

               
Cow position:
               
chr25:35802459-35802650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
287-480
               

               
Cow position:
               
chr25:24669249-24669436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-485
               

               
Cow position:
               
chr25:2662598-2662402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 157
               

               
Conread position:
               
287-488
               

               
Cow position:
               
chr25:28945220-28945020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
287-494
               

               
Cow position:
               
chr25:5922510-5922710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
203, 59
               

               
Conread position:
               
287-499
               

               
Cow position:
               
chr25:5808151-5807934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
287-509
               

               
Cow position:
               
chr25:15294984-15294775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-510
               

               
Cow position:
               
chr25:7277120-7277340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
287-524
               

               
Cow position:
               
chr25:1840525-1840287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
287-524
               

               
Cow position:
               
chr25:4489106-4488883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr25:7008123-7007871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr25:30852969-30852723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
287-532
               

               
Cow position:
               
chr25:20157088-20157342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr25:11957008-11956760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 233
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr25:14513310-14513068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
186, 81
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr25:20008338-20008090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 235
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr25:21245390-21245647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
288-386
               

               
Cow position:
               
chr25:22538547-22538450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
288-386
               

               
Cow position:
               
chr25:25582108-25582012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
288-432
               

               
Cow position:
               
chr25:37648985-37648838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
288-437
               

               
Cow position:
               
chr25:20019774-20019921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
137, 76
               

               
Conread position:
               
288-471
               

               
Cow position:
               
chr25:31926181-31926360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
288-486
               

               
Cow position:
               
chr25:18551131-18551332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
288-531
               

               
Cow position:
               
chr25:15409720-15409955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
288-531
               

               
Cow position:
               
chr25:33550714-33550466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
288-532
               

               
Cow position:
               
chr25:11432747-11432985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
289-417
               

               
Cow position:
               
chr25:6940289-6940418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
289-430
               

               
Cow position:
               
chr25:17141305-17141160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
289-464
               

               
Cow position:
               
chr25:11543399-11543567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
289-484
               

               
Cow position:
               
chr25:29903835-29903639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
289-497
               

               
Cow position:
               
chr25:11841500-11841288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
289-499
               

               
Cow position:
               
chr25:9573933-9574141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 147
               

               
Conread position:
               
289-504
               

               
Cow position:
               
chr25:2111237-2111032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
212, 10
               

               
Conread position:
               
289-509
               

               
Cow position:
               
chr25:3744533-3744767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
289-523
               

               
Cow position:
               
chr25:16921591-16921833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
289-523
               

               
Cow position:
               
chr25:33557468-33557238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 138
               

               
Conread position:
               
289-529
               

               
Cow position:
               
chr25:18288568-18288810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 182
               

               
Conread position:
               
289-531
               

               
Cow position:
               
chr25:6178217-6177990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr25:7217018-7216785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 13
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr25:9025324-9025081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr25:9843382-9843129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr25:21893535-21893292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 15
               

               
Conread position:
               
290-393
               

               
Cow position:
               
chr25:12899967-12899865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
290-417
               

               
Cow position:
               
chr25:32587050-32587173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
290-446
               

               
Cow position:
               
chr25:33272838-33272675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
290-461
               

               
Cow position:
               
chr25:7684699-7684871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
290-471
               

               
Cow position:
               
chr25:13805227-13805030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chr25:15553100-15552925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
290-475
               

               
Cow position:
               
chr25:26156584-26156764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
290-496
               

               
Cow position:
               
chr25:21668449-21668241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
290-507
               

               
Cow position:
               
chr25:10643116-10643328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
290-520
               

               
Cow position:
               
chr25:4245866-4245645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
290-524
               

               
Cow position:
               
chr25:14152388-14152148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
290-524
               

               
Cow position:
               
chr25:36840583-36840360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
188, 41
               

               
Conread position:
               
290-525
               

               
Cow position:
               
chr25:7380637-7380877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
290-530
               

               
Cow position:
               
chr25:36082069-36081836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
290-531
               

               
Cow position:
               
chr25:13272770-13272527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 226
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr25:20069913-20069679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr25:38958145-38957916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
239, 34
               

               
Conread position:
               
291-416
               

               
Cow position:
               
chr25:31343833-31343958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
291-430
               

               
Cow position:
               
chr25:18480860-18480721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
291-454
               

               
Cow position:
               
chr25:1509763-1509932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
291-469
               

               
Cow position:
               
chr25:14241148-14241334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
291-474
               

               
Cow position:
               
chr25:22734206-22734022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
291-480
               

               
Cow position:
               
chr25:15349709-15349897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 145
               

               
Conread position:
               
291-497
               

               
Cow position:
               
chr25:36746249-36746457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
291-499
               

               
Cow position:
               
chr25:12195020-12195237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
81, 163
               

               
Conread position:
               
291-499
               

               
Cow position:
               
chr25:12509821-12510022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
291-499
               

               
Cow position:
               
chr25:37331846-37332047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
291-515
               

               
Cow position:
               
chr25:1925413-1925619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
176, 81
               

               
Conread position:
               
291-518
               

               
Cow position:
               
chr25:22508103-22508334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr25:9616038-9615805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
291-524
               

               
Cow position:
               
chr25:13826631-13826400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
291-524
               

               
Cow position:
               
chr25:21192742-21192965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr25:26655092-26654866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
292-386
               

               
Cow position:
               
chr25:36135916-36136009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-407
               

               
Cow position:
               
chr25:28856637-28856519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
292-469
               

               
Cow position:
               
chr25:22154229-22154043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
292-470
               

               
Cow position:
               
chr25:15447690-15447514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
292-471
               

               
Cow position:
               
chr25:9023943-9023768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
292-479
               

               
Cow position:
               
chr25:17138074-17137881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
292-481
               

               
Cow position:
               
chr25:35902945-35902754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
292-493
               

               
Cow position:
               
chr25:7306488-7306286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
292-504
               

               
Cow position:
               
chr25:36555500-36555705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
292-521
               

               
Cow position:
               
chr25:13325769-13325547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
292-525
               

               
Cow position:
               
chr25:11038561-11038317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
292-532
               

               
Cow position:
               
chr25:38135951-38135704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr25:1763282-1763045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
229, 7
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr25:1823893-1824142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr25:14791953-14791710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 162
               

               
Conread position:
               
293-395
               

               
Cow position:
               
chr25:19301598-19301495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
293-418
               

               
Cow position:
               
chr25:14658928-14659050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-468
               

               
Cow position:
               
chr25:4192204-4192024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
293-469
               

               
Cow position:
               
chr25:36156009-36155837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
293-477
               

               
Cow position:
               
chr25:14164395-14164207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
293-490
               

               
Cow position:
               
chr25:26269517-26269718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
293-496
               

               
Cow position:
               
chr25:14419893-14419693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
293-507
               

               
Cow position:
               
chr25:11436627-11436826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-517
               

               
Cow position:
               
chr25:20487238-20487472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
293-518
               

               
Cow position:
               
chr25:14720929-14720714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-519
               

               
Cow position:
               
chr25:17975202-17975408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
293-523
               

               
Cow position:
               
chr25:4521644-4521872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
293-524
               

               
Cow position:
               
chr25:432851-433085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
293-524
               

               
Cow position:
               
chr25:8120978-8120751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
293-524
               

               
Cow position:
               
chr25:19584566-19584328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 6
               

               
Conread position:
               
293-525
               

               
Cow position:
               
chr25:22179107-22178880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
293-529
               

               
Cow position:
               
chr25:6292766-6292528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
293-531
               

               
Cow position:
               
chr25:19679549-19679312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
293-531
               

               
Cow position:
               
chr25:35052421-35052664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
293-533
               

               
Cow position:
               
chr25:13380401-13380654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
293-533
               

               
Cow position:
               
chr25:26160723-26160475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
294-402
               

               
Cow position:
               
chr25:3972663-3972555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 5
               

               
Conread position:
               
294-432
               

               
Cow position:
               
chr25:13470515-13470658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
294-473
               

               
Cow position:
               
chr25:11373712-11373885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 5
               

               
Conread position:
               
294-495
               

               
Cow position:
               
chr25:23998743-23998931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
294-523
               

               
Cow position:
               
chr25:14225563-14225328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
294-524
               

               
Cow position:
               
chr25:20785390-20785624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
294-527
               

               
Cow position:
               
chr25:27801475-27801242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 5
               

               
Conread position:
               
294-533
               

               
Cow position:
               
chr25:7641259-7641498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
149, 5
               

               
Conread position:
               
294-533
               

               
Cow position:
               
chr25:19130051-19129809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
295-519
               

               
Cow position:
               
chr25:9989906-9990141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
296-454
               

               
Cow position:
               
chr25:9635514-9635364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
297-413
               

               
Cow position:
               
chr25:7475640-7475523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
299-438
               

               
Cow position:
               
chr25:4504588-4504724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
299-440
               

               
Cow position:
               
chr25:18812608-18812747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
299-458
               

               
Cow position:
               
chr25:14210168-14210013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
299-464
               

               
Cow position:
               
chr25:10856524-10856690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
299-470
               

               
Cow position:
               
chr25:31705419-31705242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 105
               

               
Conread position:
               
299-471
               

               
Cow position:
               
chr25:10817234-10817405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
299-482
               

               
Cow position:
               
chr25:9640842-9641030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
299-493
               

               
Cow position:
               
chr25:11760268-11760455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr25:31514376-31514166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
299-506
               

               
Cow position:
               
chr25:10791627-10791833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
201, 65
               

               
Conread position:
               
299-520
               

               
Cow position:
               
chr25:6682858-6683094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
299-524
               

               
Cow position:
               
chr25:9939065-9939293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 107
               

               
Conread position:
               
299-530
               

               
Cow position:
               
chr25:15273856-15273630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
219, 59
               

               
Conread position:
               
299-532
               

               
Cow position:
               
chr25:6928324-6928553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
299-532
               

               
Cow position:
               
chr25:17658804-17658565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
299-533
               

               
Cow position:
               
chr25:9269532-9269303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
299-533
               

               
Cow position:
               
chr25:17403668-17403440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
300-475
               

               
Cow position:
               
chr25:447716-447890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
300-493
               

               
Cow position:
               
chr25:31657089-31657282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
300-519
               

               
Cow position:
               
chr25:26072372-26072587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
300-523
               

               
Cow position:
               
chr25:13223088-13222865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
300-524
               

               
Cow position:
               
chr25:11823253-11823466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
300-529
               

               
Cow position:
               
chr25:36835241-36835467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
300-533
               

               
Cow position:
               
chr25:16318959-16319188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
225, 51
               

               
Conread position:
               
300-533
               

               
Cow position:
               
chr25:19363869-19364105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
300-533
               

               
Cow position:
               
chr25:26306012-26306251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
301-519
               

               
Cow position:
               
chr25:16372743-16372520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr25:7799742-7799512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
301-533
               

               
Cow position:
               
chr25:10504145-10504382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
302-531
               

               
Cow position:
               
chr25:23828941-23829172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 194
               

               
Conread position:
               
303-471
               

               
Cow position:
               
chr25:26061536-26061710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
75, 103
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr25:21500854-21501079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
303-521
               

               
Cow position:
               
chr25:24651269-24651486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
303-533
               

               
Cow position:
               
chr25:17704927-17704700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
304-507
               

               
Cow position:
               
chr25:7673494-7673276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
305-484
               

               
Cow position:
               
chr25:18646766-18646589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
305-529
               

               
Cow position:
               
chr25:22242135-22241928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
214, 52
               

               
Conread position:
               
305-533
               

               
Cow position:
               
chr25:22756798-22756565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
306-453
               

               
Cow position:
               
chr25:18877419-18877560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
306-507
               

               
Cow position:
               
chr25:36873152-36873352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
306-519
               

               
Cow position:
               
chr25:20461301-20461076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
306-524
               

               
Cow position:
               
chr25:6259069-6258847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
306-529
               

               
Cow position:
               
chr25:20023209-20023426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
306-532
               

               
Cow position:
               
chr25:17566776-17566543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
306-533
               

               
Cow position:
               
chr25:13443222-13443457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 203
               

               
Conread position:
               
308-447
               

               
Cow position:
               
chr25:22571142-22570999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
308-483
               

               
Cow position:
               
chr25:23323680-23323495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
308-524
               

               
Cow position:
               
chr25:36872546-36872322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
310-525
               

               
Cow position:
               
chr25:9107352-9107561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
310-533
               

               
Cow position:
               
chr25:16867426-16867196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
55, 213
               

               
Conread position:
               
311-464
               

               
Cow position:
               
chr25:11855367-11855525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
311-465
               

               
Cow position:
               
chr25:14949631-14949788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
311-466
               

               
Cow position:
               
chr25:14849470-14849631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr25:2624974-2624766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
311-520
               

               
Cow position:
               
chr25:17190574-17190775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
311-526
               

               
Cow position:
               
chr25:23779153-23779368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 201
               

               
Conread position:
               
312-531
               

               
Cow position:
               
chr25:40321117-40321329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
312-533
               

               
Cow position:
               
chr25:23244825-23245047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
313-461
               

               
Cow position:
               
chr25:32277436-32277580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
319-503
               

               
Cow position:
               
chr25:6718082-6718262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr25:8157337-8157550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
321-533
               

               
Cow position:
               
chr25:788427-788219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
324-446
               

               
Cow position:
               
chr25:18568047-18568175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
324-488
               

               
Cow position:
               
chr25:10138489-10138318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
47, 132
               

               
Conread position:
               
324-514
               

               
Cow position:
               
chr25:11661660-11661844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
324-524
               

               
Cow position:
               
chr25:15715039-15714837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
324-532
               

               
Cow position:
               
chr25:33256532-33256312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
324-533
               

               
Cow position:
               
chr25:16065049-16064846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
325-484
               

               
Cow position:
               
chr25:13049134-13049298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
326-524
               

               
Cow position:
               
chr25:41132201-41132397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
326-533
               

               
Cow position:
               
chr25:21594556-21594747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
328-460
               

               
Cow position:
               
chr25:6782023-6781890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
329-485
               

               
Cow position:
               
chr25:26112457-26112309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
331-437
               

               
Cow position:
               
chr25:36785530-36785638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
331-446
               

               
Cow position:
               
chr25:23769728-23769845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
332-458
               

               
Cow position:
               
chr25:8596310-8596440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
332-524
               

               
Cow position:
               
chr25:2041723-2041905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
184, 33
               

               
Conread position:
               
338-533
               

               
Cow position:
               
chr25:18988533-18988345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
339-524
               

               
Cow position:
               
chr25:34978716-34978898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
347-458
               

               
Cow position:
               
chr25:26174743-26174630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
351-492
               

               
Cow position:
               
chr25:22280863-22281005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
353-533
               

               
Cow position:
               
chr25:33978081-33978259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
354-517
               

               
Cow position:
               
chr25:9056313-9056150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
355-525
               

               
Cow position:
               
chr25:36021454-36021289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
357-533
               

               
Cow position:
               
chr25:12840587-12840766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
142, 169
               

               
Conread position:
               
359-526
               

               
Cow position:
               
chr25:18906016-18905848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
359-528
               

               
Cow position:
               
chr25:34170075-34169905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
160, 94
               

               
Conread position:
               
359-533
               

               
Cow position:
               
chr25:21894757-21894930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
165, 11
               

               
Conread position:
               
360-462
               

               
Cow position:
               
chr25:32908066-32907964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-476
               

               
Cow position:
               
chr25:11272500-11272387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
360-490
               

               
Cow position:
               
chr25:14265084-14264954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
360-499
               

               
Cow position:
               
chr25:30624955-30625094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-523
               

               
Cow position:
               
chr25:15463715-15463552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-524
               

               
Cow position:
               
chr25:31762479-31762644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
360-527
               

               
Cow position:
               
chr25:36120626-36120459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 154
               

               
Conread position:
               
360-530
               

               
Cow position:
               
chr25:40931401-40931232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
156, 112
               

               
Conread position:
               
360-531
               

               
Cow position:
               
chr25:22531409-22531239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
164, 115
               

               
Conread position:
               
360-531
               

               
Cow position:
               
chr25:38421794-38421622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 149
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr25:12252681-12252856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr25:14196987-14196816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr25:28187817-28187990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
166, 138
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr25:36019542-36019713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
361-483
               

               
Cow position:
               
chr25:23016147-23016025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
361-520
               

               
Cow position:
               
chr25:23505179-23505021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
361-527
               

               
Cow position:
               
chr25:7581299-7581469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 152
               

               
Conread position:
               
361-533
               

               
Cow position:
               
chr25:13569051-13569214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
361-533
               

               
Cow position:
               
chr25:22750881-22751053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
361-533
               

               
Cow position:
               
chr25:23917969-23917799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
362-518
               

               
Cow position:
               
chr25:4009221-4009063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
363-510
               

               
Cow position:
               
chr25:15218257-15218114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
363-520
               

               
Cow position:
               
chr25:61775-61618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
363-533
               

               
Cow position:
               
chr25:26052028-26051857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
365-517
               

               
Cow position:
               
chr25:5920204-5920052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
366-499
               

               
Cow position:
               
chr25:15254226-15254359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
366-527
               

               
Cow position:
               
chr25:30656527-30656684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
366-533
               

               
Cow position:
               
chr25:36762227-36762061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
367-494
               

               
Cow position:
               
chr25:34967388-34967515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
368-531
               

               
Cow position:
               
chr25:14157745-14157579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
368-533
               

               
Cow position:
               
chr25:23817721-23817887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
369-480
               

               
Cow position:
               
chr25:12205152-12205041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
372-524
               

               
Cow position:
               
chr25:6961037-6961189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
373-533
               

               
Cow position:
               
chr25:6688058-6687903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
375-494
               

               
Cow position:
               
chr25:15025023-15024906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
377-533
               

               
Cow position:
               
chr25:8961881-8961724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
141, 85
               

               
Conread position:
               
378-498
               

               
Cow position:
               
chr25:30064803-30064923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-508
               

               
Cow position:
               
chr25:4221493-4221623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-515
               

               
Cow position:
               
chr25:13503544-13503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
378-523
               

               
Cow position:
               
chr25:35090459-35090608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
378-527
               

               
Cow position:
               
chr25:38982203-38982059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
378-529
               

               
Cow position:
               
chr25:7379037-7379188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-530
               

               
Cow position:
               
chr25:18564596-18564444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
379-494
               

               
Cow position:
               
chr25:7018015-7017902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
379-533
               

               
Cow position:
               
chr25:18541836-18541993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
385-503
               

               
Cow position:
               
chr25:6227138-6227020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
385-526
               

               
Cow position:
               
chr25:14809376-14809235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
386-533
               

               
Cow position:
               
chr25:447162-447312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
386-533
               

               
Cow position:
               
chr25:9349181-9349324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
386-533
               

               
Cow position:
               
chr25:36036677-36036826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
392-533
               

               
Cow position:
               
chr25:16714173-16714314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
393-511
               

               
Cow position:
               
chr25:10359720-10359603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
394-533
               

               
Cow position:
               
chr25:11131678-11131537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
396-499
               

               
Cow position:
               
chr25:14211721-14211618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-533
               

               
Cow position:
               
chr25:15377409-15377280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
407-525
               

               
Cow position:
               
chr25:19317346-19317229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               
Show alignments to all cow chromosomes.