Non-Coding RNA Search

Cow genome map


           Conread name:
           Pig2-108O01
        

               Conread position:
               199-463
               

               Cow position:
               chr27:22747995-22748257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               180, 6
               

               Conread position:
               205-492
               

               Cow position:
               chr27:26401049-26400763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               231-523
               

               Cow position:
               chr27:4944806-4944525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               236-518
               

               Cow position:
               chr27:27740596-27740307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               242-459
               

               Cow position:
               chr27:24358045-24358258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               247-395
               

               Cow position:
               chr27:22181772-22181921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               247-531
               

               Cow position:
               chr27:19546810-19546517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               114, 27
               

               Conread position:
               249-455
               

               Cow position:
               chr27:4195268-4195468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               249-533
               

               Cow position:
               chr27:15867108-15867395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 19
               

               Conread position:
               250-450
               

               Cow position:
               chr27:67952-68142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               252-363
               

               Cow position:
               chr27:18767363-18767256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               252-386
               

               Cow position:
               chr27:2685156-2685288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               252-491
               

               Cow position:
               chr27:19741676-19741451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               253-424
               

               Cow position:
               chr27:20302292-20302457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               253-487
               

               Cow position:
               chr27:9504266-9504504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 166
               

               Conread position:
               253-517
               

               Cow position:
               chr27:10404399-10404133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               125, 23
               

               Conread position:
               255-533
               

               Cow position:
               chr27:19387741-19388015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               255-533
               

               Cow position:
               chr27:23859879-23860159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               256-533
               

               Cow position:
               chr27:20514543-20514819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               258-454
               

               Cow position:
               chr27:22583469-22583667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               258-461
               

               Cow position:
               chr27:26939799-26940006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               258-470
               

               Cow position:
               chr27:4544626-4544412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 15
               

               Conread position:
               258-526
               

               Cow position:
               chr27:26852863-26852594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 191
               

               Conread position:
               258-533
               

               Cow position:
               chr27:13875454-13875729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               259-520
               

               Cow position:
               chr27:31170349-31170078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               112, 42
               

               Conread position:
               259-521
               

               Cow position:
               chr27:26794062-26793796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               111, 141
               

               Conread position:
               260-485
               

               Cow position:
               chr27:12284719-12284945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               260-519
               

               Cow position:
               chr27:26245825-26245564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               41, 202
               

               Conread position:
               260-531
               

               Cow position:
               chr27:26226562-26226294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               261-460
               

               Cow position:
               chr27:29246422-29246221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               262-428
               

               Cow position:
               chr27:24952227-24952060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               116, 70
               

               Conread position:
               263-386
               

               Cow position:
               chr27:342350-342475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               263-462
               

               Cow position:
               chr27:11145607-11145807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               263-484
               

               Cow position:
               chr27:20591651-20591879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 172
               

               Conread position:
               264-519
               

               Cow position:
               chr27:29319131-29319396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               265-457
               

               Cow position:
               chr27:10350621-10350433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               265-498
               

               Cow position:
               chr27:20828972-20828746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               265-516
               

               Cow position:
               chr27:28922167-28921912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               266-533
               

               Cow position:
               chr27:15865337-15865609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               267-533
               

               Cow position:
               chr27:591039-590761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               268-442
               

               Cow position:
               chr27:3698939-3698764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               268-471
               

               Cow position:
               chr27:24559850-24559638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               268-520
               

               Cow position:
               chr27:18435398-18435149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               268-531
               

               Cow position:
               chr27:16103540-16103804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 36
               

               Conread position:
               270-438
               

               Cow position:
               chr27:4487043-4486873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               107, 10
               

               Conread position:
               270-458
               

               Cow position:
               chr27:15434067-15434249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 29
               

               Conread position:
               270-471
               

               Cow position:
               chr27:24035542-24035339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 32
               

               Conread position:
               270-507
               

               Cow position:
               chr27:23484952-23485182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               270-533
               

               Cow position:
               chr27:22386623-22386869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               251, 10
               

               Conread position:
               271-376
               

               Cow position:
               chr27:8292760-8292654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               271-476
               

               Cow position:
               chr27:14005150-14005352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               271-485
               

               Cow position:
               chr27:31498518-31498730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               271-498
               

               Cow position:
               chr27:6162670-6162446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 106
               

               Conread position:
               271-516
               

               Cow position:
               chr27:28896612-28896864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               271-517
               

               Cow position:
               chr27:27558771-27558521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               271-519
               

               Cow position:
               chr27:15669037-15668786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               108, 13
               

               Conread position:
               271-533
               

               Cow position:
               chr27:14269597-14269342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               271-533
               

               Cow position:
               chr27:16704987-16705250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 253
               

               Conread position:
               271-533
               

               Cow position:
               chr27:23632347-23632593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               272-471
               

               Cow position:
               chr27:18491303-18491493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               272-495
               

               Cow position:
               chr27:31231342-31231120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               272-519
               

               Cow position:
               chr27:20553041-20552793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 58
               

               Conread position:
               273-433
               

               Cow position:
               chr27:27012433-27012598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               273-476
               

               Cow position:
               chr27:26314392-26314181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               273-522
               

               Cow position:
               chr27:2592271-2592530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 251
               

               Conread position:
               273-524
               

               Cow position:
               chr27:1353316-1353573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               273-533
               

               Cow position:
               chr27:22560086-22559826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 13
               

               Conread position:
               274-438
               

               Cow position:
               chr27:22150953-22150790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               274-464
               

               Cow position:
               chr27:10581272-10581464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               95, 25
               

               Conread position:
               274-469
               

               Cow position:
               chr27:21201927-21202128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               274-482
               

               Cow position:
               chr27:11349024-11349224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               101, 23
               

               Conread position:
               274-524
               

               Cow position:
               chr27:8791004-8790751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               274-526
               

               Cow position:
               chr27:31169367-31169116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               247, 27
               

               Conread position:
               274-531
               

               Cow position:
               chr27:17933655-17933924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               275-460
               

               Cow position:
               chr27:21101554-21101364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               275-461
               

               Cow position:
               chr27:30884767-30884955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 24
               

               Conread position:
               275-532
               

               Cow position:
               chr27:27136800-27136522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 237
               

               Conread position:
               276-414
               

               Cow position:
               chr27:18521788-18521924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               276-457
               

               Cow position:
               chr27:23957258-23957443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               109, 5
               

               Conread position:
               276-460
               

               Cow position:
               chr27:262076-262263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               276-460
               

               Cow position:
               chr27:26317805-26317993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               276-471
               

               Cow position:
               chr27:20266485-20266288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 11
               

               Conread position:
               276-481
               

               Cow position:
               chr27:4398745-4398544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               276-484
               

               Cow position:
               chr27:18791775-18791559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               276-490
               

               Cow position:
               chr27:13204206-13204415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               276-497
               

               Cow position:
               chr27:20888473-20888683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               276-517
               

               Cow position:
               chr27:26121496-26121743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               276-524
               

               Cow position:
               chr27:27632853-27632611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               276-525
               

               Cow position:
               chr27:17397710-17397463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               276-525
               

               Cow position:
               chr27:23545599-23545338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               276-527
               

               Cow position:
               chr27:24303682-24303939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               276-531
               

               Cow position:
               chr27:13940811-13940558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               103, 52
               

               Conread position:
               276-533
               

               Cow position:
               chr27:6550200-6550455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               276-533
               

               Cow position:
               chr27:19500497-19500237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 130
               

               Conread position:
               276-533
               

               Cow position:
               chr27:29593889-29593630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               276-533
               

               Cow position:
               chr27:30914745-30915005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               23, 193
               

               Conread position:
               277-461
               

               Cow position:
               chr27:23100903-23100721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               277-516
               

               Cow position:
               chr27:7343685-7343446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               277-517
               

               Cow position:
               chr27:22180025-22179786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               57, 22
               

               Conread position:
               277-524
               

               Cow position:
               chr27:20501575-20501831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               277-526
               

               Cow position:
               chr27:26437381-26437129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               277-531
               

               Cow position:
               chr27:27856079-27856330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               277-532
               

               Cow position:
               chr27:17331232-17331494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               277-533
               

               Cow position:
               chr27:20749265-20749016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               278-463
               

               Cow position:
               chr27:31183315-31183505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               280-525
               

               Cow position:
               chr27:26617159-26617397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               281-378
               

               Cow position:
               chr27:28290586-28290683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               281-386
               

               Cow position:
               chr27:11466772-11466667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               281-403
               

               Cow position:
               chr27:28058179-28058303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 106
               

               Conread position:
               281-433
               

               Cow position:
               chr27:30441445-30441604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               281-440
               

               Cow position:
               chr27:19991893-19992055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               281-472
               

               Cow position:
               chr27:20081388-20081191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               14, 186
               

               Conread position:
               281-481
               

               Cow position:
               chr27:18752590-18752804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               281-485
               

               Cow position:
               chr27:20484475-20484681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               281-487
               

               Cow position:
               chr27:11133833-11134039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               281-494
               

               Cow position:
               chr27:16246552-16246767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               176, 30
               

               Conread position:
               281-497
               

               Cow position:
               chr27:29164519-29164733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 67
               

               Conread position:
               281-499
               

               Cow position:
               chr27:26481453-26481230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 125
               

               Conread position:
               281-501
               

               Cow position:
               chr27:7346413-7346641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 127
               

               Conread position:
               281-501
               

               Cow position:
               chr27:20628804-20629036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               281-503
               

               Cow position:
               chr27:31004686-31004912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               281-505
               

               Cow position:
               chr27:6106451-6106671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               281-518
               

               Cow position:
               chr27:26173241-26173481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 135
               

               Conread position:
               281-520
               

               Cow position:
               chr27:22220294-22220540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               281-525
               

               Cow position:
               chr27:19508757-19509004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               281-527
               

               Cow position:
               chr27:15925091-15925339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               20, 31
               

               Conread position:
               281-527
               

               Cow position:
               chr27:20354343-20354583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               18, 145
               

               Conread position:
               281-531
               

               Cow position:
               chr27:11435584-11435325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               281-531
               

               Cow position:
               chr27:16965317-16965569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 204
               

               Conread position:
               281-531
               

               Cow position:
               chr27:24446393-24446159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               246, 24
               

               Conread position:
               281-532
               

               Cow position:
               chr27:16088535-16088806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               87, 255
               

               Conread position:
               281-533
               

               Cow position:
               chr27:23510720-23510989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               281-533
               

               Cow position:
               chr27:23929722-23929974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               183, 77
               

               Conread position:
               281-533
               

               Cow position:
               chr27:26509411-26509161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               282-443
               

               Cow position:
               chr27:21448076-21447920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               282-496
               

               Cow position:
               chr27:24440472-24440260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               282-516
               

               Cow position:
               chr27:25809770-25809537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               282-524
               

               Cow position:
               chr27:9977432-9977675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               282-524
               

               Cow position:
               chr27:14670635-14670392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               282-533
               

               Cow position:
               chr27:29831962-29831700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               283-533
               

               Cow position:
               chr27:6924827-6925087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               284-393
               

               Cow position:
               chr27:26413532-26413424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               285-444
               

               Cow position:
               chr27:7538544-7538381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               285-451
               

               Cow position:
               chr27:19074274-19074105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               285-473
               

               Cow position:
               chr27:17908515-17908320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               285-483
               

               Cow position:
               chr27:31248858-31248664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               285-485
               

               Cow position:
               chr27:22792586-22792783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               285-488
               

               Cow position:
               chr27:4414067-4413864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               179, 22
               

               Conread position:
               285-499
               

               Cow position:
               chr27:15926545-15926761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               285-518
               

               Cow position:
               chr27:26565542-26565774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 131
               

               Conread position:
               285-532
               

               Cow position:
               chr27:4390508-4390253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               285-532
               

               Cow position:
               chr27:19932812-19933062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 203
               

               Conread position:
               286-465
               

               Cow position:
               chr27:27606544-27606365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               286-467
               

               Cow position:
               chr27:25382387-25382218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               286-470
               

               Cow position:
               chr27:19557142-19557325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               170, 31
               

               Conread position:
               286-492
               

               Cow position:
               chr27:29614792-29615000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               286-509
               

               Cow position:
               chr27:29388421-29388647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               286-515
               

               Cow position:
               chr27:7935405-7935175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               286-531
               

               Cow position:
               chr27:29431225-29431461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               286-533
               

               Cow position:
               chr27:10582121-10582372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               286-533
               

               Cow position:
               chr27:26424827-26424586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               226, 115
               

               Conread position:
               287-381
               

               Cow position:
               chr27:24320818-24320912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               287-386
               

               Cow position:
               chr27:19823061-19823159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               287-392
               

               Cow position:
               chr27:1193553-1193448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               287-417
               

               Cow position:
               chr27:26315389-26315257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               287-431
               

               Cow position:
               chr27:28192862-28192718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               287-446
               

               Cow position:
               chr27:23760229-23760069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               287-454
               

               Cow position:
               chr27:22102891-22102723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               287-476
               

               Cow position:
               chr27:27450133-27449943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               287-483
               

               Cow position:
               chr27:11507513-11507314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               287-483
               

               Cow position:
               chr27:23128216-23128409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               128, 14
               

               Conread position:
               287-485
               

               Cow position:
               chr27:26236078-26236277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 139
               

               Conread position:
               287-485
               

               Cow position:
               chr27:27828105-27827900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               287-488
               

               Cow position:
               chr27:18688662-18688455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               287-499
               

               Cow position:
               chr27:3518252-3518470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               93, 119
               

               Conread position:
               287-506
               

               Cow position:
               chr27:20548560-20548783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               287-509
               

               Cow position:
               chr27:15332539-15332320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               287-524
               

               Cow position:
               chr27:8353246-8353466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               287-524
               

               Cow position:
               chr27:30890052-30890280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               287-531
               

               Cow position:
               chr27:20584717-20584461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               74, 120
               

               Conread position:
               287-531
               

               Cow position:
               chr27:27438757-27438510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               287-532
               

               Cow position:
               chr27:19681698-19681951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               287-533
               

               Cow position:
               chr27:6541384-6541627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 215
               

               Conread position:
               287-533
               

               Cow position:
               chr27:12425038-12425288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 216
               

               Conread position:
               287-533
               

               Cow position:
               chr27:16284237-16284476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               287-533
               

               Cow position:
               chr27:19544151-19543920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               232, 74
               

               Conread position:
               287-533
               

               Cow position:
               chr27:20812674-20812904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               287-533
               

               Cow position:
               chr27:21990893-21991153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               287-533
               

               Cow position:
               chr27:23560279-23560031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               287-533
               

               Cow position:
               chr27:27020346-27020106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               287-533
               

               Cow position:
               chr27:28190441-28190216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               288-385
               

               Cow position:
               chr27:7212979-7212882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-444
               

               Cow position:
               chr27:28062443-28062288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               288-451
               

               Cow position:
               chr27:21660888-21661053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               87, 11
               

               Conread position:
               288-462
               

               Cow position:
               chr27:31153803-31153629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               100, 16
               

               Conread position:
               288-465
               

               Cow position:
               chr27:21143325-21143136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               288-488
               

               Cow position:
               chr27:25790054-25790246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               288-490
               

               Cow position:
               chr27:3498307-3498506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               288-492
               

               Cow position:
               chr27:30882108-30881891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               288-503
               

               Cow position:
               chr27:7425437-7425218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               288-517
               

               Cow position:
               chr27:14343684-14343472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               154, 48
               

               Conread position:
               288-524
               

               Cow position:
               chr27:22171053-22171287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               89, 71
               

               Conread position:
               288-530
               

               Cow position:
               chr27:23594071-23594319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               288-531
               

               Cow position:
               chr27:10979612-10979861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               288-532
               

               Cow position:
               chr27:23735720-23735959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 121
               

               Conread position:
               288-533
               

               Cow position:
               chr27:426721-426969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 172
               

               Conread position:
               288-533
               

               Cow position:
               chr27:2957168-2957404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               209, 90
               

               Conread position:
               288-533
               

               Cow position:
               chr27:11982897-11982649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               90, 145
               

               Conread position:
               288-533
               

               Cow position:
               chr27:13607912-13607676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               288-533
               

               Cow position:
               chr27:26112166-26111912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               288-533
               

               Cow position:
               chr27:30868999-30868742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               289-386
               

               Cow position:
               chr27:154177-154274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-395
               

               Cow position:
               chr27:18749168-18749058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               289-404
               

               Cow position:
               chr27:28135817-28135701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               289-442
               

               Cow position:
               chr27:20561340-20561490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               289-451
               

               Cow position:
               chr27:25000215-25000043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               289-459
               

               Cow position:
               chr27:11528681-11528856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               289-461
               

               Cow position:
               chr27:23477698-23477873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 117
               

               Conread position:
               289-470
               

               Cow position:
               chr27:27529062-27528884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               289-478
               

               Cow position:
               chr27:24755364-24755548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               289-492
               

               Cow position:
               chr27:5463007-5462820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               289-492
               

               Cow position:
               chr27:19576570-19576365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               289-498
               

               Cow position:
               chr27:23527068-23527277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               289-516
               

               Cow position:
               chr27:28206556-28206781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               93, 177
               

               Conread position:
               289-521
               

               Cow position:
               chr27:8062599-8062362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               91, 114
               

               Conread position:
               289-523
               

               Cow position:
               chr27:18882410-18882641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               231, 10
               

               Conread position:
               289-524
               

               Cow position:
               chr27:15453966-15454198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               289-524
               

               Cow position:
               chr27:16512415-16512181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               92, 61
               

               Conread position:
               289-524
               

               Cow position:
               chr27:20897268-20897035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               85, 164
               

               Conread position:
               289-524
               

               Cow position:
               chr27:23918281-23918044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               289-525
               

               Cow position:
               chr27:31210303-31210537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               88, 10
               

               Conread position:
               289-526
               

               Cow position:
               chr27:22547635-22547409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               289-527
               

               Cow position:
               chr27:23863330-23863583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               289-529
               

               Cow position:
               chr27:3306538-3306765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               289-531
               

               Cow position:
               chr27:29597992-29597753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               82, 10
               

               Conread position:
               289-533
               

               Cow position:
               chr27:8962489-8962258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               199, 35
               

               Conread position:
               289-533
               

               Cow position:
               chr27:11561527-11561774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               289-533
               

               Cow position:
               chr27:22035618-22035376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               220, 10
               

               Conread position:
               290-386
               

               Cow position:
               chr27:15214947-15215043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               290-407
               

               Cow position:
               chr27:21570623-21570509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               290-433
               

               Cow position:
               chr27:1779096-1778956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               104, 21
               

               Conread position:
               290-468
               

               Cow position:
               chr27:21951227-21951044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               290-484
               

               Cow position:
               chr27:8630120-8629921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               290-497
               

               Cow position:
               chr27:24223709-24223915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               290-503
               

               Cow position:
               chr27:15409272-15409066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               204, 73
               

               Conread position:
               290-503
               

               Cow position:
               chr27:27389273-27389051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               290-519
               

               Cow position:
               chr27:22245396-22245611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               290-530
               

               Cow position:
               chr27:13251784-13252004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               290-532
               

               Cow position:
               chr27:6241438-6241196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 9
               

               Conread position:
               290-533
               

               Cow position:
               chr27:7649837-7649585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               290-533
               

               Cow position:
               chr27:22330905-22330673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               231, 74
               

               Conread position:
               290-533
               

               Cow position:
               chr27:22439891-22440139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               290-533
               

               Cow position:
               chr27:27058652-27058407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               100, 204
               

               Conread position:
               290-533
               

               Cow position:
               chr27:28018076-28018337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               291-460
               

               Cow position:
               chr27:9253357-9253187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               291-466
               

               Cow position:
               chr27:27204683-27204497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 109
               

               Conread position:
               291-475
               

               Cow position:
               chr27:26118251-26118441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               291-476
               

               Cow position:
               chr27:20048392-20048576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               291-477
               

               Cow position:
               chr27:18873808-18873988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               291-481
               

               Cow position:
               chr27:16047732-16047551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               291-487
               

               Cow position:
               chr27:11208802-11208602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               291-503
               

               Cow position:
               chr27:26643457-26643654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               291-506
               

               Cow position:
               chr27:20612276-20612494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               291-520
               

               Cow position:
               chr27:31386875-31386644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               291-524
               

               Cow position:
               chr27:11323082-11323322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 8
               

               Conread position:
               291-525
               

               Cow position:
               chr27:7412148-7412384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               291-525
               

               Cow position:
               chr27:26434059-26433815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               291-528
               

               Cow position:
               chr27:5553227-5553463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               80, 14
               

               Conread position:
               291-530
               

               Cow position:
               chr27:28932047-28931798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               291-532
               

               Cow position:
               chr27:27442406-27442170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 85
               

               Conread position:
               291-533
               

               Cow position:
               chr27:20283398-20283640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               175, 71
               

               Conread position:
               291-533
               

               Cow position:
               chr27:21669353-21669120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               291-533
               

               Cow position:
               chr27:24228049-24227796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               292-444
               

               Cow position:
               chr27:21054213-21054372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               292-451
               

               Cow position:
               chr27:19779633-19779794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 7
               

               Conread position:
               292-454
               

               Cow position:
               chr27:2036482-2036640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               292-469
               

               Cow position:
               chr27:22497784-22497957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               127, 7
               

               Conread position:
               292-483
               

               Cow position:
               chr27:26816096-26816282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               292-485
               

               Cow position:
               chr27:28015979-28015784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               292-486
               

               Cow position:
               chr27:28253992-28254192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               79, 12
               

               Conread position:
               292-518
               

               Cow position:
               chr27:212706-212939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               77, 196
               

               Conread position:
               292-521
               

               Cow position:
               chr27:15315279-15315504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               110, 7
               

               Conread position:
               292-521
               

               Cow position:
               chr27:26087076-26087291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               292-522
               

               Cow position:
               chr27:28496614-28496384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 7
               

               Conread position:
               292-527
               

               Cow position:
               chr27:16786587-16786825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               292-531
               

               Cow position:
               chr27:28002047-28001814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               226, 7
               

               Conread position:
               292-531
               

               Cow position:
               chr27:31151140-31151377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               292-533
               

               Cow position:
               chr27:24477182-24477414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               293-399
               

               Cow position:
               chr27:14675415-14675310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 6
               

               Conread position:
               293-419
               

               Cow position:
               chr27:29399365-29399489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               293-429
               

               Cow position:
               chr27:23527742-23527606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 6
               

               Conread position:
               293-445
               

               Cow position:
               chr27:16505149-16504999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               293-458
               

               Cow position:
               chr27:178620-178787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 6
               

               Conread position:
               293-460
               

               Cow position:
               chr27:28476351-28476187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               293-467
               

               Cow position:
               chr27:26983920-26984095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 6
               

               Conread position:
               293-482
               

               Cow position:
               chr27:2949559-2949379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               293-483
               

               Cow position:
               chr27:21419427-21419236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 31
               

               Conread position:
               293-487
               

               Cow position:
               chr27:22267975-22268178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 181
               

               Conread position:
               293-493
               

               Cow position:
               chr27:16275923-16275723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               293-497
               

               Cow position:
               chr27:26853594-26853397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               86, 6
               

               Conread position:
               293-498
               

               Cow position:
               chr27:24693175-24693377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               293-503
               

               Cow position:
               chr27:23452220-23452431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               293-508
               

               Cow position:
               chr27:29494142-29493924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               293-516
               

               Cow position:
               chr27:27055053-27055268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               293-517
               

               Cow position:
               chr27:23147921-23148149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               293-520
               

               Cow position:
               chr27:10307546-10307314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               293-524
               

               Cow position:
               chr27:22602931-22603170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 172
               

               Conread position:
               293-531
               

               Cow position:
               chr27:11480881-11480641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               73, 6
               

               Conread position:
               293-531
               

               Cow position:
               chr27:18543744-18543991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               121, 91
               

               Conread position:
               293-533
               

               Cow position:
               chr27:1637169-1636937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               294-471
               

               Cow position:
               chr27:20325115-20325288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               294-476
               

               Cow position:
               chr27:29249344-29249534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               91, 11
               

               Conread position:
               294-497
               

               Cow position:
               chr27:19717656-19717878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 5
               

               Conread position:
               294-519
               

               Cow position:
               chr27:10323601-10323822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               294-520
               

               Cow position:
               chr27:30455750-30455980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               294-522
               

               Cow position:
               chr27:30764789-30765019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 111
               

               Conread position:
               294-525
               

               Cow position:
               chr27:15003222-15002987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               294-531
               

               Cow position:
               chr27:18507402-18507645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               31, 231
               

               Conread position:
               294-533
               

               Cow position:
               chr27:18558116-18558357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               294-533
               

               Cow position:
               chr27:26999666-26999422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               294-533
               

               Cow position:
               chr27:28467712-28467452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               73, 190
               

               Conread position:
               294-533
               

               Cow position:
               chr27:30407290-30407035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 198
               

               Conread position:
               295-495
               

               Cow position:
               chr27:20770758-20770567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               297-524
               

               Cow position:
               chr27:7731514-7731267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               299-379
               

               Cow position:
               chr27:23996359-23996279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               81
               

               Alignm identity:
               72
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               299-459
               

               Cow position:
               chr27:20490286-20490456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               299-463
               

               Cow position:
               chr27:30444912-30444751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               299-474
               

               Cow position:
               chr27:1067338-1067508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               299-476
               

               Cow position:
               chr27:31157572-31157754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 104
               

               Conread position:
               299-480
               

               Cow position:
               chr27:20324901-20325090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               299-485
               

               Cow position:
               chr27:29308105-29308294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               299-496
               

               Cow position:
               chr27:17102662-17102858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               299-527
               

               Cow position:
               chr27:12596544-12596764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               191, 75
               

               Conread position:
               299-529
               

               Cow position:
               chr27:25151851-25152078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               299-532
               

               Cow position:
               chr27:18646387-18646150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               79, 88
               

               Conread position:
               299-532
               

               Cow position:
               chr27:23994653-23994421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 126
               

               Conread position:
               299-533
               

               Cow position:
               chr27:299612-299382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               300-429
               

               Cow position:
               chr27:5227551-5227427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               300-498
               

               Cow position:
               chr27:26323205-26323412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 194
               

               Conread position:
               300-518
               

               Cow position:
               chr27:21978380-21978151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               78, 98
               

               Conread position:
               300-520
               

               Cow position:
               chr27:20517415-20517644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               300-522
               

               Cow position:
               chr27:11994105-11993879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               300-527
               

               Cow position:
               chr27:13411605-13411374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               300-529
               

               Cow position:
               chr27:22489036-22489273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 6
               

               Conread position:
               300-531
               

               Cow position:
               chr27:20637295-20637067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               301-533
               

               Cow position:
               chr27:26865344-26865119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 98
               

               Conread position:
               302-485
               

               Cow position:
               chr27:1184408-1184226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               302-499
               

               Cow position:
               chr27:19452764-19452967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               303-473
               

               Cow position:
               chr27:31031233-31031394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               303-476
               

               Cow position:
               chr27:26909822-26909649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-485
               

               Cow position:
               chr27:232317-232505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               303-532
               

               Cow position:
               chr27:2644332-2644092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               303-532
               

               Cow position:
               chr27:4858853-4858643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               303-532
               

               Cow position:
               chr27:24331480-24331718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               48, 185
               

               Conread position:
               305-498
               

               Cow position:
               chr27:7959063-7958866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               305-530
               

               Cow position:
               chr27:21393725-21393511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               305-533
               

               Cow position:
               chr27:12459056-12459284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               55, 150
               

               Conread position:
               306-466
               

               Cow position:
               chr27:23177543-23177380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               306-471
               

               Cow position:
               chr27:30997060-30996891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               306-488
               

               Cow position:
               chr27:641268-641087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               159, 59
               

               Conread position:
               306-517
               

               Cow position:
               chr27:28518062-28518281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               306-522
               

               Cow position:
               chr27:22735825-22735604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 186
               

               Conread position:
               306-529
               

               Cow position:
               chr27:29841951-29841738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               306-533
               

               Cow position:
               chr27:435001-435233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 94
               

               Conread position:
               306-533
               

               Cow position:
               chr27:23554560-23554331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               65, 134
               

               Conread position:
               306-533
               

               Cow position:
               chr27:26490136-26489907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 92
               

               Conread position:
               307-487
               

               Cow position:
               chr27:22254560-22254748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               58, 162
               

               Conread position:
               307-520
               

               Cow position:
               chr27:13318207-13317988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               307-533
               

               Cow position:
               chr27:26188597-26188829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               67, 161
               

               Conread position:
               308-453
               

               Cow position:
               chr27:26504075-26504224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               308-509
               

               Cow position:
               chr27:24731267-24731064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               308-519
               

               Cow position:
               chr27:24709325-24709538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               308-522
               

               Cow position:
               chr27:18739145-18739365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               70, 99
               

               Conread position:
               308-531
               

               Cow position:
               chr27:23108131-23107907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 169
               

               Conread position:
               308-532
               

               Cow position:
               chr27:10653453-10653685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 113
               

               Conread position:
               308-532
               

               Cow position:
               chr27:27695004-27694773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               308-533
               

               Cow position:
               chr27:19685939-19685718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               310-524
               

               Cow position:
               chr27:26238797-26239015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               311-488
               

               Cow position:
               chr27:24755765-24755942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-518
               

               Cow position:
               chr27:12710016-12710233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               311-524
               

               Cow position:
               chr27:6319697-6319910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 65
               

               Conread position:
               311-533
               

               Cow position:
               chr27:23890707-23890937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               312-486
               

               Cow position:
               chr27:23060341-23060163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               66, 165
               

               Conread position:
               315-482
               

               Cow position:
               chr27:24356812-24356986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               316-530
               

               Cow position:
               chr27:20068196-20067984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 142
               

               Conread position:
               316-533
               

               Cow position:
               chr27:28478363-28478581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               202, 52
               

               Conread position:
               318-533
               

               Cow position:
               chr27:17646376-17646169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               321-497
               

               Cow position:
               chr27:6674052-6674242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               324-508
               

               Cow position:
               chr27:29603605-29603792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               325-529
               

               Cow position:
               chr27:8168638-8168437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               325-533
               

               Cow position:
               chr27:24939683-24939900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 51
               

               Conread position:
               326-522
               

               Cow position:
               chr27:17995157-17994954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               326-530
               

               Cow position:
               chr27:1768833-1768626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               331-467
               

               Cow position:
               chr27:7847511-7847653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               331-472
               

               Cow position:
               chr27:14169195-14169338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               331-488
               

               Cow position:
               chr27:27747674-27747511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               332-520
               

               Cow position:
               chr27:20481561-20481379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 115
               

               Conread position:
               333-520
               

               Cow position:
               chr27:30489610-30489424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               334-509
               

               Cow position:
               chr27:26920113-26919936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               338-520
               

               Cow position:
               chr27:15866020-15866203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 145
               

               Conread position:
               338-527
               

               Cow position:
               chr27:14303541-14303731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               35, 122
               

               Conread position:
               339-524
               

               Cow position:
               chr27:26506545-26506732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               339-528
               

               Cow position:
               chr27:30261093-30260895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               339-533
               

               Cow position:
               chr27:22418962-22418769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               37, 138
               

               Conread position:
               343-519
               

               Cow position:
               chr27:26090506-26090326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               344-466
               

               Cow position:
               chr27:23495902-23495777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 108
               

               Conread position:
               345-533
               

               Cow position:
               chr27:28260726-28260538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               346-477
               

               Cow position:
               chr27:6522630-6522760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 28
               

               Conread position:
               347-533
               

               Cow position:
               chr27:26959804-26959617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 160
               

               Conread position:
               353-533
               

               Cow position:
               chr27:4386242-4386063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               354-533
               

               Cow position:
               chr27:22225773-22225596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               356-518
               

               Cow position:
               chr27:23895247-23895404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               356-533
               

               Cow position:
               chr27:20037293-20037116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               357-532
               

               Cow position:
               chr27:23472082-23472254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               359-527
               

               Cow position:
               chr27:24738974-24738802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               359-533
               

               Cow position:
               chr27:6302642-6302464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               152, 78
               

               Conread position:
               360-488
               

               Cow position:
               chr27:20543546-20543674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               360-505
               

               Cow position:
               chr27:22723868-22723722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               360-509
               

               Cow position:
               chr27:30908498-30908647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 70
               

               Conread position:
               360-516
               

               Cow position:
               chr27:15642997-15643155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               360-518
               

               Cow position:
               chr27:20795619-20795774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               137, 94
               

               Conread position:
               360-519
               

               Cow position:
               chr27:788970-788812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               360-520
               

               Cow position:
               chr27:16589876-16589716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               360-520
               

               Cow position:
               chr27:24305264-24305420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               360-524
               

               Cow position:
               chr27:27673191-27673027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 106
               

               Conread position:
               360-526
               

               Cow position:
               chr27:22348316-22348482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               360-527
               

               Cow position:
               chr27:1291022-1290858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               360-529
               

               Cow position:
               chr27:23483052-23483218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               360-531
               

               Cow position:
               chr27:31148588-31148757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               360-532
               

               Cow position:
               chr27:30988624-30988793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               361-485
               

               Cow position:
               chr27:23504136-23504010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               361-533
               

               Cow position:
               chr27:22454951-22454780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 152
               

               Conread position:
               362-519
               

               Cow position:
               chr27:24371071-24371225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               362-526
               

               Cow position:
               chr27:22569613-22569775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               362-527
               

               Cow position:
               chr27:22423343-22423509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               362-533
               

               Cow position:
               chr27:18923004-18922832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               163, 90
               

               Conread position:
               362-533
               

               Cow position:
               chr27:25276970-25277139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 90
               

               Conread position:
               362-533
               

               Cow position:
               chr27:30359235-30359407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               364-524
               

               Cow position:
               chr27:4672842-4673006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               365-488
               

               Cow position:
               chr27:17918886-17918763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               365-526
               

               Cow position:
               chr27:28035016-28034859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               365-527
               

               Cow position:
               chr27:17918482-17918317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               365-531
               

               Cow position:
               chr27:27641179-27641015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               365-533
               

               Cow position:
               chr27:27039006-27038839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               146, 96
               

               Conread position:
               367-528
               

               Cow position:
               chr27:4155832-4155991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               152, 35
               

               Conread position:
               367-529
               

               Cow position:
               chr27:30354511-30354349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               369-533
               

               Cow position:
               chr27:12246490-12246652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               371-495
               

               Cow position:
               chr27:27255825-27255949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-533
               

               Cow position:
               chr27:18593113-18593267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               374-520
               

               Cow position:
               chr27:237110-237255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               378-498
               

               Cow position:
               chr27:674186-674065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               382-533
               

               Cow position:
               chr27:20497054-20497209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               386-519
               

               Cow position:
               chr27:12191626-12191494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               406-533
               

               Cow position:
               chr27:21975925-21976049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               411-533
               

               Cow position:
               chr27:25379865-25379991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               415-533
               

               Cow position:
               chr27:21130187-21130305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-531
               

               Cow position:
               chr27:3784-3894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 64
               
Show alignments to all cow chromosomes.
Conread position:	199-463
Cow position:	chr27:22747995-22748257 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	159
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	180, 6
Conread position:	205-492
Cow position:	chr27:26401049-26400763 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	201
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	37, 5
Conread position:	231-523
Cow position:	chr27:4944806-4944525 (view UCSC Genome Browser custom track)
Alignm length:	293
Alignm identity:	224
Alignm E-value:	0
Alignm gaps (pig, cow):	7, 0
Conread position:	236-518
Cow position:	chr27:27740596-27740307 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	204
Alignm E-value:	9e-38
Alignm gaps (pig, cow):	26, 71
Conread position:	242-459
Cow position:	chr27:24358045-24358258 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	155
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	132, 0
Conread position:	247-395
Cow position:	chr27:22181772-22181921 (view UCSC Genome Browser custom track)
Alignm length:	152
Alignm identity:	116
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	53, 16
Conread position:	247-531
Cow position:	chr27:19546810-19546517 (view UCSC Genome Browser custom track)
Alignm length:	298
Alignm identity:	206
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	114, 27
Conread position:	249-455
Cow position:	chr27:4195268-4195468 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	150
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	44, 24
Conread position:	249-533
Cow position:	chr27:15867108-15867395 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	215
Alignm E-value:	0
Alignm gaps (pig, cow):	217, 19
Conread position:	250-450
Cow position:	chr27:67952-68142 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	142
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	30, 0
Conread position:	252-363
Cow position:	chr27:18767363-18767256 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	91
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	19, 0
Conread position:	252-386
Cow position:	chr27:2685156-2685288 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	101
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	35, 0
Conread position:	252-491
Cow position:	chr27:19741676-19741451 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	176
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	25, 48
Conread position:	253-424
Cow position:	chr27:20302292-20302457 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	123
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	75, 0
Conread position:	253-487
Cow position:	chr27:9504266-9504504 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	175
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	31, 166
Conread position:	253-517
Cow position:	chr27:10404399-10404133 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	189
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	125, 23
Conread position:	255-533
Cow position:	chr27:19387741-19388015 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	208
Alignm E-value:	0
Alignm gaps (pig, cow):	125, 31
Conread position:	256-533
Cow position:	chr27:20514543-20514819 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	209
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	44, 66
Conread position:	258-454
Cow position:	chr27:22583469-22583667 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	147
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	117, 12
Conread position:	258-461
Cow position:	chr27:26939799-26940006 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	143
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	127, 0