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Cow genome map

           
Conread name:
           
Pig2-108O01
        

               
Conread position:
               
188-480
               

               
Cow position:
               
chr28:5552398-5552700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
195-531
               

               
Cow position:
               
chr28:20174143-20173803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
229-518
               

               
Cow position:
               
chr28:10298111-10297833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
230-489
               

               
Cow position:
               
chr28:20046811-20046559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
235-474
               

               
Cow position:
               
chr28:17620086-17620339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 215
               

               
Conread position:
               
238-530
               

               
Cow position:
               
chr28:10964671-10964388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 65
               

               
Conread position:
               
245-464
               

               
Cow position:
               
chr28:18791285-18791070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
251-443
               

               
Cow position:
               
chr28:16159620-16159819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
252-533
               

               
Cow position:
               
chr28:27161070-27161364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 193
               

               
Conread position:
               
253-401
               

               
Cow position:
               
chr28:3396891-3397040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
253-485
               

               
Cow position:
               
chr28:26820033-26820266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
253-505
               

               
Cow position:
               
chr28:19127925-19128180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
253-520
               

               
Cow position:
               
chr28:2820004-2819750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
253-527
               

               
Cow position:
               
chr28:26943904-26944189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
253-533
               

               
Cow position:
               
chr28:4307646-4307940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
254-492
               

               
Cow position:
               
chr28:4051424-4051201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
254-495
               

               
Cow position:
               
chr28:21207136-21207368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
254-515
               

               
Cow position:
               
chr28:26826461-26826206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
254-531
               

               
Cow position:
               
chr28:10588794-10589058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
264, 12
               

               
Conread position:
               
254-533
               

               
Cow position:
               
chr28:5200073-5199785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 256
               

               
Conread position:
               
254-533
               

               
Cow position:
               
chr28:9294263-9294532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
254-533
               

               
Cow position:
               
chr28:33322698-33322418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr28:10140344-10140514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
256-433
               

               
Cow position:
               
chr28:16177496-16177316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
256-524
               

               
Cow position:
               
chr28:8787784-8787513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 177
               

               
Conread position:
               
256-533
               

               
Cow position:
               
chr28:26982497-26982773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
105, 7
               

               
Conread position:
               
257-447
               

               
Cow position:
               
chr28:27787804-27787614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
258-386
               

               
Cow position:
               
chr28:19025701-19025828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
258-498
               

               
Cow position:
               
chr28:3396970-3397200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
258-507
               

               
Cow position:
               
chr28:6563652-6563910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
259-532
               

               
Cow position:
               
chr28:13527436-13527159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
260-532
               

               
Cow position:
               
chr28:22371434-22371721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
261-509
               

               
Cow position:
               
chr28:8291648-8291415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
263-433
               

               
Cow position:
               
chr28:17060296-17060128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
263-500
               

               
Cow position:
               
chr28:4163344-4163584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 207
               

               
Conread position:
               
263-524
               

               
Cow position:
               
chr28:3143647-3143904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
263-531
               

               
Cow position:
               
chr28:8140718-8140447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
266-455
               

               
Cow position:
               
chr28:16200512-16200703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
266-474
               

               
Cow position:
               
chr28:7964449-7964657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
269-477
               

               
Cow position:
               
chr28:34081642-34081846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 127
               

               
Conread position:
               
269-528
               

               
Cow position:
               
chr28:5818067-5817807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
107, 88
               

               
Conread position:
               
271-505
               

               
Cow position:
               
chr28:19038790-19039029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 5
               

               
Conread position:
               
271-531
               

               
Cow position:
               
chr28:28631969-28631696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
271-532
               

               
Cow position:
               
chr28:4159192-4158917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
272-458
               

               
Cow position:
               
chr28:8515964-8516146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
272-507
               

               
Cow position:
               
chr28:7131867-7132099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
272-520
               

               
Cow position:
               
chr28:5205477-5205246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
272-524
               

               
Cow position:
               
chr28:25129110-25128858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
115, 178
               

               
Conread position:
               
272-533
               

               
Cow position:
               
chr28:2279375-2279627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
273-476
               

               
Cow position:
               
chr28:7145025-7144817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
273-489
               

               
Cow position:
               
chr28:10203334-10203125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
273-515
               

               
Cow position:
               
chr28:19015927-19015696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
273-519
               

               
Cow position:
               
chr28:17740047-17739801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
274-381
               

               
Cow position:
               
chr28:6124035-6124142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
274-433
               

               
Cow position:
               
chr28:3257214-3257050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
274-476
               

               
Cow position:
               
chr28:10196647-10196846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
274-485
               

               
Cow position:
               
chr28:22630234-22630022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
274-488
               

               
Cow position:
               
chr28:117533-117756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
274-518
               

               
Cow position:
               
chr28:11307291-11307542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
274-519
               

               
Cow position:
               
chr28:22346245-22345997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
274-526
               

               
Cow position:
               
chr28:118839-118578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
274-533
               

               
Cow position:
               
chr28:21868680-21868418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
275-468
               

               
Cow position:
               
chr28:8936371-8936177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
275-531
               

               
Cow position:
               
chr28:21845173-21844921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
243, 26
               

               
Conread position:
               
276-444
               

               
Cow position:
               
chr28:21118903-21118728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
276-454
               

               
Cow position:
               
chr28:3759219-3759031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
276-458
               

               
Cow position:
               
chr28:16252185-16252368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
276-458
               

               
Cow position:
               
chr28:22362465-22362290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
276-471
               

               
Cow position:
               
chr28:11239088-11239296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
276-473
               

               
Cow position:
               
chr28:11305415-11305613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
98, 23
               

               
Conread position:
               
276-485
               

               
Cow position:
               
chr28:32015008-32014794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
276-488
               

               
Cow position:
               
chr28:13174333-13174557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr28:4884032-4884252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
276-492
               

               
Cow position:
               
chr28:2892479-2892254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
276-493
               

               
Cow position:
               
chr28:14242919-14242695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
276-503
               

               
Cow position:
               
chr28:777897-777666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
276-507
               

               
Cow position:
               
chr28:4101734-4101508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
187, 71
               

               
Conread position:
               
276-507
               

               
Cow position:
               
chr28:13048062-13048295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
276-517
               

               
Cow position:
               
chr28:11743606-11743841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
276-518
               

               
Cow position:
               
chr28:4937017-4937265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
276-519
               

               
Cow position:
               
chr28:29988887-29989143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
276-523
               

               
Cow position:
               
chr28:5204405-5204167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
5, 23
               

               
Conread position:
               
276-525
               

               
Cow position:
               
chr28:9426129-9426381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 238
               

               
Conread position:
               
276-531
               

               
Cow position:
               
chr28:11059712-11059468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
276-531
               

               
Cow position:
               
chr28:28561122-28560860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
276-532
               

               
Cow position:
               
chr28:12662167-12662436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr28:3484807-3484541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr28:4823825-4823570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr28:11866446-11866703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr28:18139253-18139495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
240, 5
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr28:20125002-20124746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
276-533
               

               
Cow position:
               
chr28:31841127-31841382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
277-469
               

               
Cow position:
               
chr28:18761785-18761977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
277-532
               

               
Cow position:
               
chr28:4873103-4873382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
278-434
               

               
Cow position:
               
chr28:7808849-7808700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-458
               

               
Cow position:
               
chr28:4077117-4077309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
278-465
               

               
Cow position:
               
chr28:10763107-10762925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-479
               

               
Cow position:
               
chr28:2825640-2825435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
278-479
               

               
Cow position:
               
chr28:11827909-11827704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 180
               

               
Conread position:
               
278-529
               

               
Cow position:
               
chr28:5236093-5235850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
280-425
               

               
Cow position:
               
chr28:5428537-5428684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
280-476
               

               
Cow position:
               
chr28:22085329-22085523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
280-507
               

               
Cow position:
               
chr28:11828741-11828968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
88, 175
               

               
Conread position:
               
280-525
               

               
Cow position:
               
chr28:25727587-25727348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
280-527
               

               
Cow position:
               
chr28:16214667-16214903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
280-530
               

               
Cow position:
               
chr28:14657933-14657662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
280-531
               

               
Cow position:
               
chr28:21046371-21046612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
280-533
               

               
Cow position:
               
chr28:30607979-30608226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
241, 49
               

               
Conread position:
               
281-431
               

               
Cow position:
               
chr28:7750804-7750952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
281-438
               

               
Cow position:
               
chr28:3311002-3311167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
281-444
               

               
Cow position:
               
chr28:2737310-2737467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
281-451
               

               
Cow position:
               
chr28:4866361-4866529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
281-462
               

               
Cow position:
               
chr28:24698909-24698723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
281-476
               

               
Cow position:
               
chr28:27445357-27445554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
281-485
               

               
Cow position:
               
chr28:2821478-2821263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
281-495
               

               
Cow position:
               
chr28:4876656-4876443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
281-497
               

               
Cow position:
               
chr28:11411322-11411538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
186, 94
               

               
Conread position:
               
281-503
               

               
Cow position:
               
chr28:9705872-9705644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
281-518
               

               
Cow position:
               
chr28:8304459-8304224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
281-519
               

               
Cow position:
               
chr28:13356150-13356391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
281-520
               

               
Cow position:
               
chr28:7350865-7350629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
281-520
               

               
Cow position:
               
chr28:23724253-23724487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
157, 18
               

               
Conread position:
               
281-521
               

               
Cow position:
               
chr28:13245783-13245534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
281-525
               

               
Cow position:
               
chr28:10863584-10863814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
281-525
               

               
Cow position:
               
chr28:11426332-11426572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
234, 18
               

               
Conread position:
               
281-526
               

               
Cow position:
               
chr28:16204109-16204366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr28:3445263-3445517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr28:8827383-8827128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 189
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr28:10615733-10615983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 43
               

               
Conread position:
               
281-531
               

               
Cow position:
               
chr28:24966602-24966350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr28:5255087-5254837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr28:8347951-8347696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
97, 134
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr28:9812502-9812240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr28:21103604-21103864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr28:616585-616347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
235, 18
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr28:5144296-5144556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 247
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr28:7618943-7619189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr28:10606421-10606664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 60
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr28:11884314-11884557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
282-455
               

               
Cow position:
               
chr28:6301301-6301121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
282-473
               

               
Cow position:
               
chr28:24651390-24651584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
282-507
               

               
Cow position:
               
chr28:15362794-15362567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
282-511
               

               
Cow position:
               
chr28:1632435-1632668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
282-520
               

               
Cow position:
               
chr28:5630316-5630073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr28:3449526-3449264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
282-533
               

               
Cow position:
               
chr28:7697762-7698016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 186
               

               
Conread position:
               
283-519
               

               
Cow position:
               
chr28:26719544-26719319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
283-531
               

               
Cow position:
               
chr28:2762386-2762159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
284-471
               

               
Cow position:
               
chr28:4870582-4870781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
285-377
               

               
Cow position:
               
chr28:20614337-20614430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
285-423
               

               
Cow position:
               
chr28:4536724-4536583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
285-459
               

               
Cow position:
               
chr28:11562030-11562210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
285-471
               

               
Cow position:
               
chr28:2777743-2777554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chr28:7014667-7014450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
285-519
               

               
Cow position:
               
chr28:10495086-10495322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
285-519
               

               
Cow position:
               
chr28:24707114-24706873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
285-521
               

               
Cow position:
               
chr28:4809988-4809753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
285-523
               

               
Cow position:
               
chr28:11398580-11398825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
285-524
               

               
Cow position:
               
chr28:3741080-3740846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
237, 14
               

               
Conread position:
               
285-531
               

               
Cow position:
               
chr28:23460356-23460114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr28:3011055-3011309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr28:3725994-3726250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
286-461
               

               
Cow position:
               
chr28:17943936-17943764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
286-489
               

               
Cow position:
               
chr28:9109423-9109222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
286-499
               

               
Cow position:
               
chr28:5441685-5441901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr28:4881037-4881264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
286-520
               

               
Cow position:
               
chr28:22182921-22183172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
286-530
               

               
Cow position:
               
chr28:10053121-10053366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
286-531
               

               
Cow position:
               
chr28:5436874-5437122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
93, 136
               

               
Conread position:
               
286-531
               

               
Cow position:
               
chr28:30937471-30937704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
232, 35
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr28:5684911-5684668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr28:23410122-23410361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr28:28765692-28765941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
286-533
               

               
Cow position:
               
chr28:34877761-34878006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
287-438
               

               
Cow position:
               
chr28:22278412-22278575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
287-454
               

               
Cow position:
               
chr28:26574611-26574451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
287-458
               

               
Cow position:
               
chr28:26960702-26960872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
287-468
               

               
Cow position:
               
chr28:2077713-2077527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
287-471
               

               
Cow position:
               
chr28:3678570-3678386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
287-474
               

               
Cow position:
               
chr28:19395075-19394896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
287-476
               

               
Cow position:
               
chr28:28903347-28903542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
287-479
               

               
Cow position:
               
chr28:7644956-7644756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
287-483
               

               
Cow position:
               
chr28:8681226-8681419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
194, 78
               

               
Conread position:
               
287-488
               

               
Cow position:
               
chr28:13269929-13269738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
287-499
               

               
Cow position:
               
chr28:6358200-6358418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
287-499
               

               
Cow position:
               
chr28:10978048-10977837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
287-500
               

               
Cow position:
               
chr28:30302996-30303205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
287-504
               

               
Cow position:
               
chr28:23262240-23262462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
287-515
               

               
Cow position:
               
chr28:1532219-1531987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
287-519
               

               
Cow position:
               
chr28:22133120-22132887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
287-519
               

               
Cow position:
               
chr28:26615064-26614849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
287-520
               

               
Cow position:
               
chr28:21008461-21008690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
287-521
               

               
Cow position:
               
chr28:9740669-9740440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
287-523
               

               
Cow position:
               
chr28:32179910-32179668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 184
               

               
Conread position:
               
287-524
               

               
Cow position:
               
chr28:12991346-12991107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
186, 85
               

               
Conread position:
               
287-525
               

               
Cow position:
               
chr28:4071169-4070937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
186, 34
               

               
Conread position:
               
287-529
               

               
Cow position:
               
chr28:2524153-2523908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr28:4643559-4643803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
69, 233
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr28:13370929-13371175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
287-531
               

               
Cow position:
               
chr28:27218536-27218290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
91, 153
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr28:5577742-5577488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr28:9100140-9099897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
287-533
               

               
Cow position:
               
chr28:16085530-16085287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
288-443
               

               
Cow position:
               
chr28:4588523-4588370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
288-447
               

               
Cow position:
               
chr28:3494571-3494403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
288-456
               

               
Cow position:
               
chr28:17737941-17738114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
288-467
               

               
Cow position:
               
chr28:22170073-22170255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
288-483
               

               
Cow position:
               
chr28:22847378-22847578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
288-496
               

               
Cow position:
               
chr28:4877222-4877432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
288-496
               

               
Cow position:
               
chr28:12974095-12973880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
288-497
               

               
Cow position:
               
chr28:16918964-16919170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
288-497
               

               
Cow position:
               
chr28:22308854-22308639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
288-498
               

               
Cow position:
               
chr28:22332738-22332525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 18
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr28:4182211-4181992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
288-521
               

               
Cow position:
               
chr28:4006990-4006760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
288-523
               

               
Cow position:
               
chr28:22323469-22323242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 113
               

               
Conread position:
               
288-523
               

               
Cow position:
               
chr28:25057165-25056937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
230, 13
               

               
Conread position:
               
288-524
               

               
Cow position:
               
chr28:4013293-4013055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
288-524
               

               
Cow position:
               
chr28:16369879-16370112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
288-531
               

               
Cow position:
               
chr28:14495012-14494788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
234, 11
               

               
Conread position:
               
288-533
               

               
Cow position:
               
chr28:20759484-20759738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
288-533
               

               
Cow position:
               
chr28:23007533-23007770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
231, 11
               

               
Conread position:
               
289-444
               

               
Cow position:
               
chr28:9070094-9069939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
289-458
               

               
Cow position:
               
chr28:22500297-22500461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
289-471
               

               
Cow position:
               
chr28:5245566-5245380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
289-473
               

               
Cow position:
               
chr28:29500615-29500423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
289-492
               

               
Cow position:
               
chr28:9418739-9418963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
289-492
               

               
Cow position:
               
chr28:28501450-28501236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 179
               

               
Conread position:
               
289-497
               

               
Cow position:
               
chr28:8259841-8259626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
289-497
               

               
Cow position:
               
chr28:17727903-17728101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
289-520
               

               
Cow position:
               
chr28:29416517-29416741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
289-521
               

               
Cow position:
               
chr28:5193532-5193305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 42
               

               
Conread position:
               
289-523
               

               
Cow position:
               
chr28:4834634-4834872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
289-524
               

               
Cow position:
               
chr28:3492579-3492812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
289-524
               

               
Cow position:
               
chr28:22813457-22813233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
289-525
               

               
Cow position:
               
chr28:662308-662074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
289-527
               

               
Cow position:
               
chr28:12951624-12951392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
289-531
               

               
Cow position:
               
chr28:5931553-5931321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
289-532
               

               
Cow position:
               
chr28:11987371-11987139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
289-532
               

               
Cow position:
               
chr28:12055609-12055377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
289-532
               

               
Cow position:
               
chr28:20409600-20409355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 159
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr28:4016731-4016495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr28:7371902-7372159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr28:19564026-19564268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 85
               

               
Conread position:
               
290-445
               

               
Cow position:
               
chr28:24238277-24238427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
290-454
               

               
Cow position:
               
chr28:8655958-8656125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
290-461
               

               
Cow position:
               
chr28:2151232-2151406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
290-488
               

               
Cow position:
               
chr28:3137761-3137550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
290-497
               

               
Cow position:
               
chr28:26784049-26784243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
290-499
               

               
Cow position:
               
chr28:32358312-32358104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
290-503
               

               
Cow position:
               
chr28:24064684-24064903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
290-522
               

               
Cow position:
               
chr28:11346282-11346514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
290-528
               

               
Cow position:
               
chr28:19217020-19216789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
290-530
               

               
Cow position:
               
chr28:5074313-5074539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
290-532
               

               
Cow position:
               
chr28:24082478-24082232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr28:13474507-13474263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 229
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr28:17948910-17949153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 9
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr28:23793113-23793347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr28:30746531-30746765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
290-533
               

               
Cow position:
               
chr28:34843364-34843611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 163
               

               
Conread position:
               
291-470
               

               
Cow position:
               
chr28:4027263-4027437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
291-474
               

               
Cow position:
               
chr28:5609712-5609896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
291-507
               

               
Cow position:
               
chr28:5232146-5231926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr28:3410783-3411012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 8
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr28:31223351-31223582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
291-525
               

               
Cow position:
               
chr28:30326895-30327118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr28:7008775-7009013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr28:11422612-11422853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr28:17680832-17680584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
292-422
               

               
Cow position:
               
chr28:8165008-8165143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
292-454
               

               
Cow position:
               
chr28:16767404-16767555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-457
               

               
Cow position:
               
chr28:25518551-25518727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
292-465
               

               
Cow position:
               
chr28:21744917-21744745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-474
               

               
Cow position:
               
chr28:10891120-10891288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
292-476
               

               
Cow position:
               
chr28:7413868-7413678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
292-485
               

               
Cow position:
               
chr28:12598541-12598349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
292-485
               

               
Cow position:
               
chr28:19024655-19024443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
292-487
               

               
Cow position:
               
chr28:34830359-34830165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
292-497
               

               
Cow position:
               
chr28:4364617-4364824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
292-498
               

               
Cow position:
               
chr28:6322023-6321814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
292-498
               

               
Cow position:
               
chr28:23531068-23530871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
292-499
               

               
Cow position:
               
chr28:30902326-30902122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-519
               

               
Cow position:
               
chr28:13133840-13133608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
292-520
               

               
Cow position:
               
chr28:34230436-34230203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
292-527
               

               
Cow position:
               
chr28:17012099-17012328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
292-528
               

               
Cow position:
               
chr28:5236390-5236637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
292-533
               

               
Cow position:
               
chr28:11814873-11815115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 232
               

               
Conread position:
               
293-468
               

               
Cow position:
               
chr28:20281952-20281785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
293-482
               

               
Cow position:
               
chr28:659082-659282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
293-494
               

               
Cow position:
               
chr28:24996413-24996612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
293-499
               

               
Cow position:
               
chr28:5805866-5805667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
293-504
               

               
Cow position:
               
chr28:8396529-8396325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
208, 6
               

               
Conread position:
               
293-507
               

               
Cow position:
               
chr28:29850618-29850827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
293-516
               

               
Cow position:
               
chr28:19262380-19262606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 6
               

               
Conread position:
               
293-520
               

               
Cow position:
               
chr28:5138795-5139016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
293-521
               

               
Cow position:
               
chr28:6091561-6091336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
293-524
               

               
Cow position:
               
chr28:4089856-4090083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
293-524
               

               
Cow position:
               
chr28:33884607-33884375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
60, 132
               

               
Conread position:
               
293-525
               

               
Cow position:
               
chr28:11816480-11816697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
224, 6
               

               
Conread position:
               
293-526
               

               
Cow position:
               
chr28:9636253-9636490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
293-530
               

               
Cow position:
               
chr28:11348630-11348389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 6
               

               
Conread position:
               
293-530
               

               
Cow position:
               
chr28:11585005-11585238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
225, 6
               

               
Conread position:
               
293-530
               

               
Cow position:
               
chr28:30293382-30293622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
83, 6
               

               
Conread position:
               
293-533
               

               
Cow position:
               
chr28:4282284-4282526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
294-443
               

               
Cow position:
               
chr28:21263357-21263209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 5
               

               
Conread position:
               
294-460
               

               
Cow position:
               
chr28:26867951-26868116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
294-470
               

               
Cow position:
               
chr28:10252711-10252892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
294-495
               

               
Cow position:
               
chr28:7557523-7557734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
294-503
               

               
Cow position:
               
chr28:10888829-10888629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
294-520
               

               
Cow position:
               
chr28:4186106-4185882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
294-526
               

               
Cow position:
               
chr28:3746400-3746166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
187, 5
               

               
Conread position:
               
295-443
               

               
Cow position:
               
chr28:15295441-15295288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
295-521
               

               
Cow position:
               
chr28:3200664-3200433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
296-531
               

               
Cow position:
               
chr28:1099475-1099696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
232, 77
               

               
Conread position:
               
296-533
               

               
Cow position:
               
chr28:15601475-15601239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
297-517
               

               
Cow position:
               
chr28:27721896-27721681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
298-499
               

               
Cow position:
               
chr28:11016604-11016404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
299-397
               

               
Cow position:
               
chr28:4375427-4375525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
299-433
               

               
Cow position:
               
chr28:7523216-7523354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
299-454
               

               
Cow position:
               
chr28:2435839-2435991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
299-470
               

               
Cow position:
               
chr28:33032677-33032513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
299-474
               

               
Cow position:
               
chr28:16856907-16857085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
299-485
               

               
Cow position:
               
chr28:8716181-8716377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
299-485
               

               
Cow position:
               
chr28:20968377-20968570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
299-487
               

               
Cow position:
               
chr28:10890543-10890727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
299-488
               

               
Cow position:
               
chr28:4074176-4073976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
299-492
               

               
Cow position:
               
chr28:19994747-19994943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 161
               

               
Conread position:
               
299-504
               

               
Cow position:
               
chr28:18797509-18797311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
299-507
               

               
Cow position:
               
chr28:3023717-3023925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
299-517
               

               
Cow position:
               
chr28:24646782-24646571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
299-519
               

               
Cow position:
               
chr28:9285178-9285394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
299-521
               

               
Cow position:
               
chr28:751427-751201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
299-521
               

               
Cow position:
               
chr28:7267750-7267968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
299-530
               

               
Cow position:
               
chr28:24672467-24672231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
299-533
               

               
Cow position:
               
chr28:6059272-6059507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
299-533
               

               
Cow position:
               
chr28:6975433-6975203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
300-458
               

               
Cow position:
               
chr28:16570002-16569842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 109
               

               
Conread position:
               
300-519
               

               
Cow position:
               
chr28:12672263-12672489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
300-524
               

               
Cow position:
               
chr28:11527061-11527287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
61, 151
               

               
Conread position:
               
300-524
               

               
Cow position:
               
chr28:34430225-34430454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
300-526
               

               
Cow position:
               
chr28:26152209-26151986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
300-531
               

               
Cow position:
               
chr28:10745414-10745176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
302-479
               

               
Cow position:
               
chr28:26530671-26530850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
302-527
               

               
Cow position:
               
chr28:24343549-24343340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr28:5674067-5673872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
304-531
               

               
Cow position:
               
chr28:12933542-12933770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
304-531
               

               
Cow position:
               
chr28:14998258-14998030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
305-518
               

               
Cow position:
               
chr28:9684144-9684357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
305-533
               

               
Cow position:
               
chr28:4046037-4045811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
306-495
               

               
Cow position:
               
chr28:11451313-11451492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
306-496
               

               
Cow position:
               
chr28:18608173-18608369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
306-499
               

               
Cow position:
               
chr28:16879760-16879569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr28:5711819-5712010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 137
               

               
Conread position:
               
306-503
               

               
Cow position:
               
chr28:26531089-26531286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
306-518
               

               
Cow position:
               
chr28:3914897-3914693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
172, 57
               

               
Conread position:
               
306-523
               

               
Cow position:
               
chr28:16346346-16346559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
306-531
               

               
Cow position:
               
chr28:17071532-17071299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
306-533
               

               
Cow position:
               
chr28:21363932-21363709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
307-454
               

               
Cow position:
               
chr28:24726251-24726396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
307-473
               

               
Cow position:
               
chr28:3729829-3729996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
307-533
               

               
Cow position:
               
chr28:26743822-26743587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
308-462
               

               
Cow position:
               
chr28:10855531-10855685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
308-533
               

               
Cow position:
               
chr28:20397176-20397407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 225
               

               
Conread position:
               
310-504
               

               
Cow position:
               
chr28:16210913-16211110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
311-488
               

               
Cow position:
               
chr28:2743262-2743088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
311-508
               

               
Cow position:
               
chr28:12430794-12430593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
311-515
               

               
Cow position:
               
chr28:555683-555484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
312-444
               

               
Cow position:
               
chr28:4100578-4100708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
313-527
               

               
Cow position:
               
chr28:20406211-20406004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
316-512
               

               
Cow position:
               
chr28:9384109-9384304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
319-524
               

               
Cow position:
               
chr28:4138488-4138700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
324-533
               

               
Cow position:
               
chr28:11559459-11559672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 22
               

               
Conread position:
               
325-531
               

               
Cow position:
               
chr28:34134031-34133825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
326-488
               

               
Cow position:
               
chr28:4022848-4022680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
326-498
               

               
Cow position:
               
chr28:27429198-27429028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
328-497
               

               
Cow position:
               
chr28:7927339-7927175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
328-527
               

               
Cow position:
               
chr28:26103868-26103672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
329-517
               

               
Cow position:
               
chr28:19294964-19295151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
329-529
               

               
Cow position:
               
chr28:3408053-3408254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
182, 98
               

               
Conread position:
               
331-487
               

               
Cow position:
               
chr28:13448291-13448131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
338-485
               

               
Cow position:
               
chr28:8167193-8167344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
339-533
               

               
Cow position:
               
chr28:5650586-5650774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
340-490
               

               
Cow position:
               
chr28:10212270-10212422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
341-520
               

               
Cow position:
               
chr28:4938958-4938788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
343-499
               

               
Cow position:
               
chr28:25596778-25596627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
350-469
               

               
Cow position:
               
chr28:8258971-8258850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
351-533
               

               
Cow position:
               
chr28:25728341-25728163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 103
               

               
Conread position:
               
352-533
               

               
Cow position:
               
chr28:25249495-25249317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
353-517
               

               
Cow position:
               
chr28:7437329-7437484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
353-527
               

               
Cow position:
               
chr28:8149484-8149664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
353-530
               

               
Cow position:
               
chr28:13176547-13176717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
172, 101
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr28:13090385-13090564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
147, 132
               

               
Conread position:
               
354-533
               

               
Cow position:
               
chr28:7156981-7156797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
359-531
               

               
Cow position:
               
chr28:8021966-8022138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
360-507
               

               
Cow position:
               
chr28:7498012-7498159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-514
               

               
Cow position:
               
chr28:2899124-2898970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
360-518
               

               
Cow position:
               
chr28:8147729-8147886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
360-518
               

               
Cow position:
               
chr28:25400004-25399850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
360-530
               

               
Cow position:
               
chr28:2960696-2960867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
116, 18
               

               
Conread position:
               
360-530
               

               
Cow position:
               
chr28:6971209-6971384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr28:2131789-2131964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr28:2752359-2752531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr28:4841255-4841435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr28:8408871-8408698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 159
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr28:19025872-19026046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
159, 14
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr28:29434295-29434465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
361-521
               

               
Cow position:
               
chr28:7388638-7388793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
361-533
               

               
Cow position:
               
chr28:12619707-12619537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
361-533
               

               
Cow position:
               
chr28:19222016-19222188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
361-533
               

               
Cow position:
               
chr28:20313411-20313239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
362-533
               

               
Cow position:
               
chr28:17601421-17601590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
362-533
               

               
Cow position:
               
chr28:30865548-30865381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
163, 12
               

               
Conread position:
               
362-533
               

               
Cow position:
               
chr28:32174764-32174593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
362-533
               

               
Cow position:
               
chr28:33052169-33051995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
363-480
               

               
Cow position:
               
chr28:6053403-6053286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
363-502
               

               
Cow position:
               
chr28:8102813-8102952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
363-520
               

               
Cow position:
               
chr28:34247899-34248054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
363-523
               

               
Cow position:
               
chr28:12070363-12070210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
363-524
               

               
Cow position:
               
chr28:17398102-17398259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
363-524
               

               
Cow position:
               
chr28:17414343-17414500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
364-531
               

               
Cow position:
               
chr28:11752008-11752177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
365-492
               

               
Cow position:
               
chr28:18533775-18533903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
365-504
               

               
Cow position:
               
chr28:9927771-9927910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
365-524
               

               
Cow position:
               
chr28:10172287-10172444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
365-526
               

               
Cow position:
               
chr28:25806699-25806542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
366-520
               

               
Cow position:
               
chr28:4765804-4765649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
72, 12
               

               
Conread position:
               
367-533
               

               
Cow position:
               
chr28:7776373-7776540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
368-491
               

               
Cow position:
               
chr28:12385165-12385289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
368-529
               

               
Cow position:
               
chr28:15043735-15043896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 81
               

               
Conread position:
               
368-533
               

               
Cow position:
               
chr28:4438838-4438672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
373-499
               

               
Cow position:
               
chr28:25675384-25675509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
373-533
               

               
Cow position:
               
chr28:7805300-7805461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 116
               

               
Conread position:
               
375-533
               

               
Cow position:
               
chr28:32365963-32365806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
378-532
               

               
Cow position:
               
chr28:7865446-7865290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
378-532
               

               
Cow position:
               
chr28:21598133-21598289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
380-519
               

               
Cow position:
               
chr28:26922253-26922392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
382-530
               

               
Cow position:
               
chr28:4179664-4179517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
385-533
               

               
Cow position:
               
chr28:21380990-21380842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
390-515
               

               
Cow position:
               
chr28:11786612-11786738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
394-518
               

               
Cow position:
               
chr28:23676239-23676115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-533
               

               
Cow position:
               
chr28:18186656-18186518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 109
               
Show alignments to all cow chromosomes.