Cow genome map
| Conread name: | Pig2-109E07 |
| Conread position: | 15-208 |
| Cow position: | chr1:54440719-54440525 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 17-208 |
| Cow position: | chr1:102460293-102460100 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 20-209 |
| Cow position: | chr1:12040882-12040695 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 21-199 |
| Cow position: | chr1:91993984-91993806 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 22-163 |
| Cow position: | chr1:83121191-83121333 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 24-209 |
| Cow position: | chr1:82516349-82516167 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 25-204 |
| Cow position: | chr1:91763473-91763303 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 25-208 |
| Cow position: | chr1:47472086-47472264 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 25-209 |
| Cow position: | chr1:32350356-32350532 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 25-216 |
| Cow position: | chr1:5303975-5304166 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 72, 169 |
| Conread position: | 25-222 |
| Cow position: | chr1:81234399-81234203 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 25-329 |
| Cow position: | chr1:96658429-96658118 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 129, 56 |
| Conread position: | 26-199 |
| Cow position: | chr1:1856577-1856403 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 26-199 |
| Cow position: | chr1:89839758-89839585 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 26-205 |
| Cow position: | chr1:42182801-42182625 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 164, 19 |
| Conread position: | 26-206 |
| Cow position: | chr1:87946138-87946312 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 26-207 |
| Cow position: | chr1:68517658-68517836 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 26-208 |
| Cow position: | chr1:68531050-68530868 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-209 |
| Cow position: | chr1:4045303-4045126 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 26-209 |
| Cow position: | chr1:95425493-95425676 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-213 |
| Cow position: | chr1:59196765-59196577 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 171, 129 |
| Conread position: | 26-216 |
| Cow position: | chr1:92612793-92612602 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 26-235 |
| Cow position: | chr1:100819489-100819698 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 200, 51 |
| Conread position: | 26-281 |
| Cow position: | chr1:67884466-67884722 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 50, 194 |
| Conread position: | 26-329 |
| Cow position: | chr1:7834014-7834315 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 49 |
| Conread position: | 26-329 |
| Cow position: | chr1:51445033-51445356 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 26-329 |
| Cow position: | chr1:89002115-89002413 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 34 |
| Conread position: | 28-193 |
| Cow position: | chr1:17487939-17488104 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-191 |
| Cow position: | chr1:38268846-38269003 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-195 |
| Cow position: | chr1:100753337-100753474 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 61-215 |
| Cow position: | chr1:78131100-78131252 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 68-340 |
| Cow position: | chr1:92260234-92259954 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 80-208 |
| Cow position: | chr1:98246786-98246658 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 119, 60 |
| Conread position: | 80-209 |
| Cow position: | chr1:79626550-79626679 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-338 |
| Cow position: | chr1:98081373-98081123 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 73, 90 |
| Conread position: | 107-338 |
| Cow position: | chr1:3970663-3970435 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 204, 29 |
| Conread position: | 111-297 |
| Cow position: | chr1:63997341-63997535 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 111, 102 |
| Conread position: | 116-329 |
| Cow position: | chr1:89489749-89489970 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 41, 142 |
| Conread position: | 134-340 |
| Cow position: | chr1:656409-656194 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 93, 121 |
Show alignments to all cow chromosomes.