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Cow genome map

           
Conread name:
           
Pig2-110D05
        

               
Conread position:
               
16-568
               

               
Cow position:
               
chr16:26676401-26676959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
21-574
               

               
Cow position:
               
chr16:8366546-8367098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
52-512
               

               
Cow position:
               
chr16:10592695-10592226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 175
               

               
Conread position:
               
58-321
               

               
Cow position:
               
chr16:16232301-16232029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
60-452
               

               
Cow position:
               
chr16:42398650-42399052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
64-569
               

               
Cow position:
               
chr16:11774817-11775319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
65-474
               

               
Cow position:
               
chr16:591567-591987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 268
               

               
Conread position:
               
65-566
               

               
Cow position:
               
chr16:56082125-56082627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 267
               

               
Conread position:
               
65-567
               

               
Cow position:
               
chr16:13689897-13689395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
66-532
               

               
Cow position:
               
chr16:11008567-11008108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
67-392
               

               
Cow position:
               
chr16:44394523-44394173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
35, 293
               

               
Conread position:
               
67-557
               

               
Cow position:
               
chr16:43661682-43661196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
68-239
               

               
Cow position:
               
chr16:12102767-12102592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
68-290
               

               
Cow position:
               
chr16:45045055-45044820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
70-456
               

               
Cow position:
               
chr16:12320452-12320065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
71-302
               

               
Cow position:
               
chr16:41095961-41095720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr16:33290616-33290365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
72-428
               

               
Cow position:
               
chr16:23955603-23955955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
73-271
               

               
Cow position:
               
chr16:30646734-30646538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
73-444
               

               
Cow position:
               
chr16:7583633-7583252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 262
               

               
Conread position:
               
73-471
               

               
Cow position:
               
chr16:34256808-34257212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
73-570
               

               
Cow position:
               
chr16:9497033-9497542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
74-263
               

               
Cow position:
               
chr16:25657327-25657136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
74-573
               

               
Cow position:
               
chr16:29096145-29095680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 215
               

               
Conread position:
               
75-249
               

               
Cow position:
               
chr16:28001002-28001185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
78-251
               

               
Cow position:
               
chr16:15251839-15252006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
78-335
               

               
Cow position:
               
chr16:33135151-33134904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
78-351
               

               
Cow position:
               
chr16:49860461-49860178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
78-489
               

               
Cow position:
               
chr16:46433101-46433514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
78-553
               

               
Cow position:
               
chr16:7136121-7136605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 184
               

               
Conread position:
               
78-554
               

               
Cow position:
               
chr16:24128932-24128447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
78-567
               

               
Cow position:
               
chr16:16235906-16236396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
79-553
               

               
Cow position:
               
chr16:56185224-56185710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
79-576
               

               
Cow position:
               
chr16:10039623-10040112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
80-458
               

               
Cow position:
               
chr16:50933673-50934030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
305, 27
               

               
Conread position:
               
80-474
               

               
Cow position:
               
chr16:34153349-34153750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
80-550
               

               
Cow position:
               
chr16:34998395-34998851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 139
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr16:5725682-5725224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr16:14754106-14754575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr16:15370903-15370427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
81-261
               

               
Cow position:
               
chr16:11775777-11775958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
81-289
               

               
Cow position:
               
chr16:22776200-22776414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
81-308
               

               
Cow position:
               
chr16:19053659-19053894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
81-319
               

               
Cow position:
               
chr16:29026434-29026186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
81-329
               

               
Cow position:
               
chr16:9830670-9830414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
81-336
               

               
Cow position:
               
chr16:40514276-40514519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
81-337
               

               
Cow position:
               
chr16:22323588-22323850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 197
               

               
Conread position:
               
81-366
               

               
Cow position:
               
chr16:589504-589768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
81-406
               

               
Cow position:
               
chr16:44429099-44428782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
81-456
               

               
Cow position:
               
chr16:38243437-38243819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 210
               

               
Conread position:
               
82-222
               

               
Cow position:
               
chr16:39646830-39646688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
82-249
               

               
Cow position:
               
chr16:23880991-23881163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
82-252
               

               
Cow position:
               
chr16:15889797-15889641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
82-261
               

               
Cow position:
               
chr16:34506565-34506387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
82-263
               

               
Cow position:
               
chr16:20252997-20253176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
82-338
               

               
Cow position:
               
chr16:56243667-56243926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
82-340
               

               
Cow position:
               
chr16:16842310-16842571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
82-341
               

               
Cow position:
               
chr16:51610607-51610878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
82-524
               

               
Cow position:
               
chr16:43308345-43308795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
82-549
               

               
Cow position:
               
chr16:50282214-50282680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr16:49125301-49125771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr16:2223174-2223660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 248
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr16:19644106-19643642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 120
               

               
Conread position:
               
82-575
               

               
Cow position:
               
chr16:18206174-18205695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
83-230
               

               
Cow position:
               
chr16:4062568-4062714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
83-263
               

               
Cow position:
               
chr16:17746252-17746071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
83-289
               

               
Cow position:
               
chr16:35297624-35297416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
83-340
               

               
Cow position:
               
chr16:14841587-14841319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 249
               

               
Conread position:
               
83-368
               

               
Cow position:
               
chr16:16817051-16816763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
83-470
               

               
Cow position:
               
chr16:22984969-22984574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 174
               

               
Conread position:
               
83-504
               

               
Cow position:
               
chr16:8068594-8069024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 189
               

               
Conread position:
               
83-553
               

               
Cow position:
               
chr16:46752050-46752532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
18, 194
               

               
Conread position:
               
84-260
               

               
Cow position:
               
chr16:42107847-42107666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
84-437
               

               
Cow position:
               
chr16:9905314-9904955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
84-553
               

               
Cow position:
               
chr16:45731188-45731625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 23
               

               
Conread position:
               
85-261
               

               
Cow position:
               
chr16:33073670-33073845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
85-274
               

               
Cow position:
               
chr16:18429805-18429610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
85-297
               

               
Cow position:
               
chr16:30940146-30939947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
85-515
               

               
Cow position:
               
chr16:52170267-52169849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
86-288
               

               
Cow position:
               
chr16:44144604-44144397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
86-551
               

               
Cow position:
               
chr16:30908733-30909182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 216
               

               
Conread position:
               
86-553
               

               
Cow position:
               
chr16:23034048-23033616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
87-263
               

               
Cow position:
               
chr16:43323072-43322883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
87-293
               

               
Cow position:
               
chr16:14376996-14376786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 182
               

               
Conread position:
               
87-407
               

               
Cow position:
               
chr16:30186857-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
87-551
               

               
Cow position:
               
chr16:48493376-48492935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr16:23681574-23681119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
88-250
               

               
Cow position:
               
chr16:35476927-35477089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
88-261
               

               
Cow position:
               
chr16:49252352-49252520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr16:53406603-53406418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
88-493
               

               
Cow position:
               
chr16:45554648-45554243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
88-504
               

               
Cow position:
               
chr16:11957367-11957790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
88-553
               

               
Cow position:
               
chr16:7011283-7010817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
88-553
               

               
Cow position:
               
chr16:27659551-27659979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
89-260
               

               
Cow position:
               
chr16:12111755-12111929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-261
               

               
Cow position:
               
chr16:31011541-31011363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-266
               

               
Cow position:
               
chr16:5396603-5396786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-277
               

               
Cow position:
               
chr16:29311741-29311543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr16:13053761-13053567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr16:26069951-26069772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
89-282
               

               
Cow position:
               
chr16:33302398-33302199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-289
               

               
Cow position:
               
chr16:13995984-13996188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
89-289
               

               
Cow position:
               
chr16:45193596-45193801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chr16:52325383-52325599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-297
               

               
Cow position:
               
chr16:258070-258282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
89-297
               

               
Cow position:
               
chr16:5382399-5382178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
89-297
               

               
Cow position:
               
chr16:9836568-9836773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
89-300
               

               
Cow position:
               
chr16:8809884-8810097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-303
               

               
Cow position:
               
chr16:19478556-19478771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
89-307
               

               
Cow position:
               
chr16:10033077-10032857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
89-316
               

               
Cow position:
               
chr16:44688186-44688412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
89-320
               

               
Cow position:
               
chr16:9729991-9730229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
89-327
               

               
Cow position:
               
chr16:31149588-31149348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
89-328
               

               
Cow position:
               
chr16:18243950-18243711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
89-370
               

               
Cow position:
               
chr16:56670697-56670983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 234
               

               
Conread position:
               
89-384
               

               
Cow position:
               
chr16:46548049-46548351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 245
               

               
Conread position:
               
89-392
               

               
Cow position:
               
chr16:47274511-47274826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
89-396
               

               
Cow position:
               
chr16:33405279-33405583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
89-402
               

               
Cow position:
               
chr16:19052846-19052540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
89-432
               

               
Cow position:
               
chr16:36120783-36121113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
89-469
               

               
Cow position:
               
chr16:45678189-45677815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
89-474
               

               
Cow position:
               
chr16:31078890-31079272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
255, 42
               

               
Conread position:
               
89-507
               

               
Cow position:
               
chr16:41530095-41530500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 88
               

               
Conread position:
               
89-532
               

               
Cow position:
               
chr16:39695264-39695711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
89-551
               

               
Cow position:
               
chr16:19003300-19003771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
89-551
               

               
Cow position:
               
chr16:26372750-26373202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
89-551
               

               
Cow position:
               
chr16:38905011-38905477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 249
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr16:8493776-8494245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 238
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr16:13660040-13660476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr16:35758412-35757961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr16:42078636-42079092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr16:45139877-45139417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
89-567
               

               
Cow position:
               
chr16:31559117-31558624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
89-567
               

               
Cow position:
               
chr16:55683512-55683025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
89-570
               

               
Cow position:
               
chr16:17143151-17142669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 241
               

               
Conread position:
               
89-571
               

               
Cow position:
               
chr16:30639530-30639071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
90-240
               

               
Cow position:
               
chr16:4911237-4911389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
90-273
               

               
Cow position:
               
chr16:36922536-36922715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
90-273
               

               
Cow position:
               
chr16:37649810-37649996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chr16:10249604-10249807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
90-289
               

               
Cow position:
               
chr16:8469891-8469685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
90-297
               

               
Cow position:
               
chr16:24142740-24142958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
90-317
               

               
Cow position:
               
chr16:12507047-12507282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
90-322
               

               
Cow position:
               
chr16:7496462-7496233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
90-326
               

               
Cow position:
               
chr16:11660257-11660486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
90-328
               

               
Cow position:
               
chr16:3032504-3032749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
90-334
               

               
Cow position:
               
chr16:7723911-7723664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
90-335
               

               
Cow position:
               
chr16:37401451-37401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
90-341
               

               
Cow position:
               
chr16:34291088-34291335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
90-499
               

               
Cow position:
               
chr16:14685180-14685590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
90-515
               

               
Cow position:
               
chr16:32301790-32302204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 240
               

               
Conread position:
               
90-532
               

               
Cow position:
               
chr16:23025527-23025107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
297, 43
               

               
Conread position:
               
90-533
               

               
Cow position:
               
chr16:31117410-31117856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
90-551
               

               
Cow position:
               
chr16:16368521-16368980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
90-553
               

               
Cow position:
               
chr16:49125979-49126436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
90-553
               

               
Cow position:
               
chr16:50417498-50417941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
90-554
               

               
Cow position:
               
chr16:8025657-8026097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
90-568
               

               
Cow position:
               
chr16:23483493-23483021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
90-569
               

               
Cow position:
               
chr16:41590980-41590516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
90-572
               

               
Cow position:
               
chr16:22841836-22842324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
91-285
               

               
Cow position:
               
chr16:4102630-4102819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
91-294
               

               
Cow position:
               
chr16:9513504-9513297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
91-296
               

               
Cow position:
               
chr16:55626974-55626772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 33
               

               
Conread position:
               
91-405
               

               
Cow position:
               
chr16:10020753-10020441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
91-490
               

               
Cow position:
               
chr16:22808363-22808743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
91-504
               

               
Cow position:
               
chr16:52274927-52275336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr16:820459-819998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr16:25170604-25170138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 227
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr16:46522101-46521649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr16:47820784-47820318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr16:51709938-51710381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
91-554
               

               
Cow position:
               
chr16:56912478-56912975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
91-564
               

               
Cow position:
               
chr16:26649424-26649897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
91-569
               

               
Cow position:
               
chr16:18353746-18354219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 13
               

               
Conread position:
               
91-571
               

               
Cow position:
               
chr16:23472952-23472478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
91-575
               

               
Cow position:
               
chr16:23564349-23563860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 205
               

               
Conread position:
               
92-231
               

               
Cow position:
               
chr16:30613013-30613154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
92-253
               

               
Cow position:
               
chr16:41654732-41654570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr16:18047942-18048182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 223
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr16:53408737-53408957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
92-408
               

               
Cow position:
               
chr16:20614706-20614380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
92-442
               

               
Cow position:
               
chr16:56565798-56565453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
92-491
               

               
Cow position:
               
chr16:24855742-24855347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
92-517
               

               
Cow position:
               
chr16:28395883-28396314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 15
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr16:38663499-38663964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
92-554
               

               
Cow position:
               
chr16:9933370-9932902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
92-554
               

               
Cow position:
               
chr16:19756572-19757040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
92-554
               

               
Cow position:
               
chr16:51069724-51070183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
93-325
               

               
Cow position:
               
chr16:38251203-38250978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
93-542
               

               
Cow position:
               
chr16:40333126-40333567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
93-552
               

               
Cow position:
               
chr16:7665848-7665380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr16:29655523-29655072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr16:37117284-37116821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr16:48398048-48398498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
93-556
               

               
Cow position:
               
chr16:53267913-53267473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
93-571
               

               
Cow position:
               
chr16:48385209-48385671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 14
               

               
Conread position:
               
93-576
               

               
Cow position:
               
chr16:8522182-8522664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
94-250
               

               
Cow position:
               
chr16:39848796-39848947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
94-287
               

               
Cow position:
               
chr16:11019302-11019506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
94-314
               

               
Cow position:
               
chr16:50286718-50286496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
94-316
               

               
Cow position:
               
chr16:9596576-9596351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
94-334
               

               
Cow position:
               
chr16:8738274-8738027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
94-335
               

               
Cow position:
               
chr16:10505019-10504791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr16:56665774-56665536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-347
               

               
Cow position:
               
chr16:45122250-45121986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 256
               

               
Conread position:
               
94-370
               

               
Cow position:
               
chr16:42432909-42433178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
94-436
               

               
Cow position:
               
chr16:19047225-19047575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
94-507
               

               
Cow position:
               
chr16:9615007-9615444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
39, 170
               

               
Conread position:
               
94-510
               

               
Cow position:
               
chr16:26702710-26703126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 156
               

               
Conread position:
               
94-514
               

               
Cow position:
               
chr16:10032847-10032412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
94-515
               

               
Cow position:
               
chr16:15504324-15504743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
94-515
               

               
Cow position:
               
chr16:50289361-50288940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
94-531
               

               
Cow position:
               
chr16:10148475-10148048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
94-552
               

               
Cow position:
               
chr16:8448452-8448914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr16:16264911-16265352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr16:21451058-21450595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 184
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr16:23066843-23066415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr16:47245795-47245335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
94-554
               

               
Cow position:
               
chr16:23822822-23823273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
94-566
               

               
Cow position:
               
chr16:44210351-44210811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
94-572
               

               
Cow position:
               
chr16:44743922-44744403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
39, 240
               

               
Conread position:
               
95-264
               

               
Cow position:
               
chr16:49733939-49734113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr16:50569465-50569276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
95-286
               

               
Cow position:
               
chr16:27326915-27327116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
95-287
               

               
Cow position:
               
chr16:48613271-48613467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
95-295
               

               
Cow position:
               
chr16:15714318-15714111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
95-295
               

               
Cow position:
               
chr16:28233098-28233303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
95-343
               

               
Cow position:
               
chr16:7394732-7394977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
95-384
               

               
Cow position:
               
chr16:44138284-44138577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
95-468
               

               
Cow position:
               
chr16:42733814-42734182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 36
               

               
Conread position:
               
95-532
               

               
Cow position:
               
chr16:45047448-45047857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
95-539
               

               
Cow position:
               
chr16:25839818-25839375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
95-553
               

               
Cow position:
               
chr16:42969714-42970184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 240
               

               
Conread position:
               
95-556
               

               
Cow position:
               
chr16:7542493-7542035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
95-572
               

               
Cow position:
               
chr16:54288072-54287607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
96-233
               

               
Cow position:
               
chr16:51216840-51216982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
96-304
               

               
Cow position:
               
chr16:38355227-38355434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
96-493
               

               
Cow position:
               
chr16:45457160-45456761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
96-497
               

               
Cow position:
               
chr16:11085195-11085578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
97-247
               

               
Cow position:
               
chr16:48130191-48130345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
97-574
               

               
Cow position:
               
chr16:49229569-49230040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
98-230
               

               
Cow position:
               
chr16:46413594-46413463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
98-237
               

               
Cow position:
               
chr16:45740996-45740858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
98-294
               

               
Cow position:
               
chr16:17474960-17474768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr16:53451907-53451707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
98-297
               

               
Cow position:
               
chr16:12220890-12220681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
98-298
               

               
Cow position:
               
chr16:11653334-11653137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
98-320
               

               
Cow position:
               
chr16:30174316-30174551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 193
               

               
Conread position:
               
98-324
               

               
Cow position:
               
chr16:28444283-28444517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
98-353
               

               
Cow position:
               
chr16:9578289-9578542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
98-368
               

               
Cow position:
               
chr16:31561958-31561691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 224
               

               
Conread position:
               
98-377
               

               
Cow position:
               
chr16:42977678-42977393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
98-382
               

               
Cow position:
               
chr16:36286483-36286758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 181
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr16:12274274-12273911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr16:51247149-51246791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
98-503
               

               
Cow position:
               
chr16:42444364-42443947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
98-514
               

               
Cow position:
               
chr16:13712738-13713130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
365, 33
               

               
Conread position:
               
98-519
               

               
Cow position:
               
chr16:8322792-8323207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 23
               

               
Conread position:
               
98-524
               

               
Cow position:
               
chr16:18757631-18758070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
98-532
               

               
Cow position:
               
chr16:2751178-2750757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
98-545
               

               
Cow position:
               
chr16:29557420-29557876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 175
               

               
Conread position:
               
98-547
               

               
Cow position:
               
chr16:51501133-51500685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr16:7429586-7429125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr16:18557078-18557519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr16:39165436-39164993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr16:39473955-39474391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
262, 15
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr16:42778149-42777710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
98-554
               

               
Cow position:
               
chr16:29766524-29766090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
98-572
               

               
Cow position:
               
chr16:18692963-18693403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
98-575
               

               
Cow position:
               
chr16:46552996-46552541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
99-369
               

               
Cow position:
               
chr16:8673407-8673683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
99-423
               

               
Cow position:
               
chr16:11083199-11082885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
99-439
               

               
Cow position:
               
chr16:54225314-54225646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 189
               

               
Conread position:
               
99-514
               

               
Cow position:
               
chr16:22773176-22772752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
99-527
               

               
Cow position:
               
chr16:48957002-48956567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 177
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr16:14242571-14242122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr16:32587411-32586946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 248
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr16:47852395-47852872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr16:56232015-56231570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
100-285
               

               
Cow position:
               
chr16:42253204-42253387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
100-288
               

               
Cow position:
               
chr16:24674471-24674669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr16:3467046-3466857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr16:24202659-24202865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 174
               

               
Conread position:
               
100-320
               

               
Cow position:
               
chr16:11359349-11359128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
100-324
               

               
Cow position:
               
chr16:17283644-17283419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
100-376
               

               
Cow position:
               
chr16:50931331-50931585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
100-503
               

               
Cow position:
               
chr16:16552768-16552358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 232
               

               
Conread position:
               
100-538
               

               
Cow position:
               
chr16:7151971-7152412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
100-547
               

               
Cow position:
               
chr16:41752379-41752820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr16:3246001-3246445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 229
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr16:35195409-35195863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 197
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr16:51598411-51598855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 180
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr16:53813447-53813912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 208
               

               
Conread position:
               
101-482
               

               
Cow position:
               
chr16:7418574-7418202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
102-553
               

               
Cow position:
               
chr16:7499240-7498816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
104-231
               

               
Cow position:
               
chr16:3604163-3604038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
104-293
               

               
Cow position:
               
chr16:56580104-56579912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
104-315
               

               
Cow position:
               
chr16:51143997-51143785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 189
               

               
Conread position:
               
104-343
               

               
Cow position:
               
chr16:22738466-22738235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
104-394
               

               
Cow position:
               
chr16:26030678-26030970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
104-430
               

               
Cow position:
               
chr16:21317411-21317725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 30
               

               
Conread position:
               
104-553
               

               
Cow position:
               
chr16:16402121-16402580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 174
               

               
Conread position:
               
104-554
               

               
Cow position:
               
chr16:54664601-54665065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
104-571
               

               
Cow position:
               
chr16:47662924-47662443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
105-256
               

               
Cow position:
               
chr16:41696203-41696048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
105-263
               

               
Cow position:
               
chr16:6266156-6266310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
105-288
               

               
Cow position:
               
chr16:28980029-28979841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
105-333
               

               
Cow position:
               
chr16:15905046-15905286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
106-239
               

               
Cow position:
               
chr16:319240-319108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
106-245
               

               
Cow position:
               
chr16:9127001-9126862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
106-251
               

               
Cow position:
               
chr16:4887000-4887140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
106-256
               

               
Cow position:
               
chr16:23515570-23515726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-259
               

               
Cow position:
               
chr16:46184357-46184195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
106-260
               

               
Cow position:
               
chr16:11053948-11053797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr16:10809627-10809473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr16:23721855-23722009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
106-273
               

               
Cow position:
               
chr16:6547672-6547837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
106-284
               

               
Cow position:
               
chr16:17180355-17180172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
106-295
               

               
Cow position:
               
chr16:19402569-19402760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
106-295
               

               
Cow position:
               
chr16:27051244-27051047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-296
               

               
Cow position:
               
chr16:43758450-43758645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
106-298
               

               
Cow position:
               
chr16:45233547-45233361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
106-300
               

               
Cow position:
               
chr16:30211645-30211451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
106-306
               

               
Cow position:
               
chr16:7928186-7928394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
106-306
               

               
Cow position:
               
chr16:12457888-12458089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
106-307
               

               
Cow position:
               
chr16:4321778-4321581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
106-318
               

               
Cow position:
               
chr16:9959025-9958808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 184
               

               
Conread position:
               
106-321
               

               
Cow position:
               
chr16:32142288-32142066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
106-322
               

               
Cow position:
               
chr16:9600612-9600395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 214
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr16:11390078-11390313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
106-325
               

               
Cow position:
               
chr16:15407360-15407585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
106-326
               

               
Cow position:
               
chr16:45943570-45943803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
106-327
               

               
Cow position:
               
chr16:12324650-12324425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-333
               

               
Cow position:
               
chr16:18953777-18953548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
106-366
               

               
Cow position:
               
chr16:12687921-12688167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
106-379
               

               
Cow position:
               
chr16:40029689-40029972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
106-412
               

               
Cow position:
               
chr16:54226418-54226708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
106-416
               

               
Cow position:
               
chr16:56796458-56796779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 231
               

               
Conread position:
               
106-417
               

               
Cow position:
               
chr16:50409444-50409115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
106-430
               

               
Cow position:
               
chr16:30662075-30662389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
106-431
               

               
Cow position:
               
chr16:39682903-39683240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 223
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr16:29712612-29712263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 195
               

               
Conread position:
               
106-459
               

               
Cow position:
               
chr16:24672664-24673046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
106-465
               

               
Cow position:
               
chr16:31269339-31268975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 227
               

               
Conread position:
               
106-470
               

               
Cow position:
               
chr16:14974372-14974703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 31
               

               
Conread position:
               
106-474
               

               
Cow position:
               
chr16:5975286-5974903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
106-474
               

               
Cow position:
               
chr16:7441904-7442277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
106-474
               

               
Cow position:
               
chr16:45693320-45692970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
264, 27
               

               
Conread position:
               
106-483
               

               
Cow position:
               
chr16:3047146-3047526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
106-483
               

               
Cow position:
               
chr16:4275546-4275926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
106-487
               

               
Cow position:
               
chr16:33198237-33198622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
106-492
               

               
Cow position:
               
chr16:6344262-6344633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
106-504
               

               
Cow position:
               
chr16:6016188-6016599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
106-515
               

               
Cow position:
               
chr16:52636199-52636599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
106-530
               

               
Cow position:
               
chr16:51697271-51696864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
106-539
               

               
Cow position:
               
chr16:15824245-15824683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
106-544
               

               
Cow position:
               
chr16:1548685-1549122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 195
               

               
Conread position:
               
106-551
               

               
Cow position:
               
chr16:33704998-33704547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
106-551
               

               
Cow position:
               
chr16:42340373-42339951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 28
               

               
Conread position:
               
106-552
               

               
Cow position:
               
chr16:48095573-48096015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 194
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr16:238462-238008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr16:4856903-4857344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr16:13698714-13698255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 232
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr16:29159309-29158879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr16:52834705-52835132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr16:53508796-53509241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
106-563
               

               
Cow position:
               
chr16:8193652-8193183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
106-566
               

               
Cow position:
               
chr16:14106840-14106379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
106-566
               

               
Cow position:
               
chr16:47519028-47518584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
106-567
               

               
Cow position:
               
chr16:15726156-15726629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 182
               

               
Conread position:
               
106-572
               

               
Cow position:
               
chr16:19670162-19670602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-574
               

               
Cow position:
               
chr16:13306675-13307136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 205
               

               
Conread position:
               
106-575
               

               
Cow position:
               
chr16:17746040-17745557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 215
               

               
Conread position:
               
107-261
               

               
Cow position:
               
chr16:18669156-18668996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
107-263
               

               
Cow position:
               
chr16:16163518-16163672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
107-335
               

               
Cow position:
               
chr16:51795409-51795642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
107-351
               

               
Cow position:
               
chr16:7626348-7626105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
107-487
               

               
Cow position:
               
chr16:44584248-44584619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr16:7456264-7456719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
109-365
               

               
Cow position:
               
chr16:51043839-51043594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
110-292
               

               
Cow position:
               
chr16:15949316-15949503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
110-324
               

               
Cow position:
               
chr16:50678049-50677836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
110-327
               

               
Cow position:
               
chr16:32893811-32893598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
110-510
               

               
Cow position:
               
chr16:9985210-9985602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
110-566
               

               
Cow position:
               
chr16:54579357-54578902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
111-280
               

               
Cow position:
               
chr16:9097217-9097040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
111-297
               

               
Cow position:
               
chr16:12939808-12939621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 158
               

               
Conread position:
               
111-326
               

               
Cow position:
               
chr16:31575338-31575115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
111-328
               

               
Cow position:
               
chr16:7812884-7812661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
22, 216
               

               
Conread position:
               
111-462
               

               
Cow position:
               
chr16:27723402-27723053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
111-487
               

               
Cow position:
               
chr16:31348571-31348953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
111-531
               

               
Cow position:
               
chr16:29038108-29037680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
111-553
               

               
Cow position:
               
chr16:15761960-15762416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
22, 221
               

               
Conread position:
               
111-575
               

               
Cow position:
               
chr16:46655473-46655008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
112-289
               

               
Cow position:
               
chr16:8090339-8090524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
112-297
               

               
Cow position:
               
chr16:31484476-31484662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
112-336
               

               
Cow position:
               
chr16:6609319-6609543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
112-406
               

               
Cow position:
               
chr16:20872201-20871923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
191, 19
               

               
Conread position:
               
112-507
               

               
Cow position:
               
chr16:8065695-8066090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 195
               

               
Conread position:
               
112-543
               

               
Cow position:
               
chr16:11815400-11815849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
112-550
               

               
Cow position:
               
chr16:5654691-5654259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
112-553
               

               
Cow position:
               
chr16:3633467-3633039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
112-553
               

               
Cow position:
               
chr16:14361286-14360854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
113-294
               

               
Cow position:
               
chr16:28199217-28199032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
113-299
               

               
Cow position:
               
chr16:33632489-33632677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr16:42539393-42539652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
113-550
               

               
Cow position:
               
chr16:26610831-26610384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
113-553
               

               
Cow position:
               
chr16:4971832-4972278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 221
               

               
Conread position:
               
113-553
               

               
Cow position:
               
chr16:17665844-17665382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
114-255
               

               
Cow position:
               
chr16:38543964-38543811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
114-260
               

               
Cow position:
               
chr16:47774137-47773997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr16:17736416-17736247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
114-334
               

               
Cow position:
               
chr16:31241104-31241325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 158
               

               
Conread position:
               
114-520
               

               
Cow position:
               
chr16:45676686-45677074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
261, 17
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr16:22850516-22850078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr16:7702703-7702278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr16:23729730-23730189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
18, 218
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr16:33646203-33645761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 213
               

               
Conread position:
               
114-558
               

               
Cow position:
               
chr16:4910334-4910788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 217
               

               
Conread position:
               
115-335
               

               
Cow position:
               
chr16:34753766-34753998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 167
               

               
Conread position:
               
115-532
               

               
Cow position:
               
chr16:14568304-14568719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
115-574
               

               
Cow position:
               
chr16:48145219-48145672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
116-269
               

               
Cow position:
               
chr16:29060570-29060405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr16:33629606-33629450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
116-271
               

               
Cow position:
               
chr16:11654230-11654068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
116-279
               

               
Cow position:
               
chr16:14226592-14226748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
116-306
               

               
Cow position:
               
chr16:9079517-9079331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
116-336
               

               
Cow position:
               
chr16:11134799-11135021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
116-462
               

               
Cow position:
               
chr16:25387155-25386818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
116-474
               

               
Cow position:
               
chr16:20205650-20205281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 214
               

               
Conread position:
               
118-332
               

               
Cow position:
               
chr16:16571084-16570880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
118-411
               

               
Cow position:
               
chr16:48917659-48917358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
15, 219
               

               
Conread position:
               
119-306
               

               
Cow position:
               
chr16:9790171-9790358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
119-532
               

               
Cow position:
               
chr16:4192248-4192654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
120-302
               

               
Cow position:
               
chr16:45826539-45826723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr16:39385668-39385487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr16:13252140-13252325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
123-553
               

               
Cow position:
               
chr16:42241944-42242371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
125-551
               

               
Cow position:
               
chr16:13578678-13579094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr16:39416661-39416826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr16:24403257-24403454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
127-432
               

               
Cow position:
               
chr16:33267896-33267583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
6, 176
               

               
Conread position:
               
127-502
               

               
Cow position:
               
chr16:17981973-17982348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
128-569
               

               
Cow position:
               
chr16:51112708-51113144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 161
               

               
Conread position:
               
130-324
               

               
Cow position:
               
chr16:25484493-25484313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
130-566
               

               
Cow position:
               
chr16:48006324-48006757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr16:1220008-1220245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr16:41578396-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
131-553
               

               
Cow position:
               
chr16:3614907-3614495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
132-423
               

               
Cow position:
               
chr16:9161245-9160968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 47
               

               
Conread position:
               
134-532
               

               
Cow position:
               
chr16:11615076-11615462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
137-556
               

               
Cow position:
               
chr16:37452452-37452872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 191
               

               
Conread position:
               
138-263
               

               
Cow position:
               
chr16:31626120-31626250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
138-273
               

               
Cow position:
               
chr16:21657325-21657187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chr16:55944983-55945176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
138-459
               

               
Cow position:
               
chr16:22380190-22380515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
138-532
               

               
Cow position:
               
chr16:5896583-5896185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
139-553
               

               
Cow position:
               
chr16:33226376-33226785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
143-553
               

               
Cow position:
               
chr16:48086715-48087123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
151-408
               

               
Cow position:
               
chr16:34220331-34220084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
151-551
               

               
Cow position:
               
chr16:42633597-42633999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
152-516
               

               
Cow position:
               
chr16:43800771-43801127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
154-335
               

               
Cow position:
               
chr16:40745218-40745398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 14
               

               
Conread position:
               
154-553
               

               
Cow position:
               
chr16:23871511-23871903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
201, 25
               

               
Conread position:
               
154-568
               

               
Cow position:
               
chr16:30028016-30027599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
172, 279
               

               
Conread position:
               
155-497
               

               
Cow position:
               
chr16:42752991-42752661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
155-534
               

               
Cow position:
               
chr16:52854878-52855255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
155-553
               

               
Cow position:
               
chr16:22804460-22804834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 5
               

               
Conread position:
               
156-297
               

               
Cow position:
               
chr16:34412950-34412809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
156-465
               

               
Cow position:
               
chr16:6319345-6319032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
156-569
               

               
Cow position:
               
chr16:7505226-7504832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
157-273
               

               
Cow position:
               
chr16:19712344-19712463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
159-369
               

               
Cow position:
               
chr16:30601558-30601355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
159-470
               

               
Cow position:
               
chr16:47855077-47854771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
160-300
               

               
Cow position:
               
chr16:12454650-12454791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
160-333
               

               
Cow position:
               
chr16:10945305-10945473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
160-577
               

               
Cow position:
               
chr16:13195204-13195611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
161-299
               

               
Cow position:
               
chr16:52705943-52706078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
161-531
               

               
Cow position:
               
chr16:37062262-37062628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
161-552
               

               
Cow position:
               
chr16:5257132-5256751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
161-553
               

               
Cow position:
               
chr16:42257582-42257202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
211, 28
               

               
Conread position:
               
162-553
               

               
Cow position:
               
chr16:7077605-7077991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
164-322
               

               
Cow position:
               
chr16:6270088-6269924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
164-510
               

               
Cow position:
               
chr16:12360840-12361184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
166-289
               

               
Cow position:
               
chr16:15203239-15203361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
166-395
               

               
Cow position:
               
chr16:44683526-44683754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
156, 70
               

               
Conread position:
               
166-551
               

               
Cow position:
               
chr16:40562361-40561975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 13
               

               
Conread position:
               
167-263
               

               
Cow position:
               
chr16:42703492-42703399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
167-291
               

               
Cow position:
               
chr16:27032707-27032582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
167-300
               

               
Cow position:
               
chr16:11922897-11923030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
167-316
               

               
Cow position:
               
chr16:48448856-48448704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
167-318
               

               
Cow position:
               
chr16:12097770-12097620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
167-370
               

               
Cow position:
               
chr16:8273707-8273900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
167-370
               

               
Cow position:
               
chr16:12501030-12501223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
167-370
               

               
Cow position:
               
chr16:22327641-22327437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 165
               

               
Conread position:
               
167-376
               

               
Cow position:
               
chr16:9500653-9500448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
167-376
               

               
Cow position:
               
chr16:56844016-56844232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
167-461
               

               
Cow position:
               
chr16:7550097-7549806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 66
               

               
Conread position:
               
167-513
               

               
Cow position:
               
chr16:20633746-20634093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
167-523
               

               
Cow position:
               
chr16:43105386-43105738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 78
               

               
Conread position:
               
167-530
               

               
Cow position:
               
chr16:45535338-45534951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
167-532
               

               
Cow position:
               
chr16:45785868-45785504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
167-552
               

               
Cow position:
               
chr16:5727061-5726677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:4059486-4059106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:12169574-12169944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:15960159-15960547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:20025571-20025191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 95
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:48340562-48340945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:49169250-49169635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr16:56875533-56875906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
167-573
               

               
Cow position:
               
chr16:53086211-53086598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 122
               

               
Conread position:
               
167-575
               

               
Cow position:
               
chr16:5364032-5363619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 167
               

               
Conread position:
               
168-329
               

               
Cow position:
               
chr16:39202270-39202108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
168-332
               

               
Cow position:
               
chr16:44713350-44713515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr16:5415633-5416006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr16:13611323-13611698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
168-566
               

               
Cow position:
               
chr16:37669608-37669993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
207, 145
               

               
Conread position:
               
168-567
               

               
Cow position:
               
chr16:8438522-8438895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
168-572
               

               
Cow position:
               
chr16:8933298-8933690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
169-517
               

               
Cow position:
               
chr16:11105681-11105330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
169-551
               

               
Cow position:
               
chr16:35188378-35188004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
169-553
               

               
Cow position:
               
chr16:26655298-26654933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
170-351
               

               
Cow position:
               
chr16:22329289-22329105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
170-357
               

               
Cow position:
               
chr16:15953693-15953872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr16:10773248-10772990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
215, 93
               

               
Conread position:
               
170-471
               

               
Cow position:
               
chr16:52133392-52133687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
171-483
               

               
Cow position:
               
chr16:17289073-17288756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
175, 153
               

               
Conread position:
               
171-553
               

               
Cow position:
               
chr16:35623125-35623503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
200, 8
               

               
Conread position:
               
172-293
               

               
Cow position:
               
chr16:20265437-20265559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr16:13414542-13414699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 7
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr16:33530535-33530374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
172-370
               

               
Cow position:
               
chr16:46430025-46430215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr16:17135850-17135659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
172-376
               

               
Cow position:
               
chr16:55968563-55968365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
172-475
               

               
Cow position:
               
chr16:17945649-17945348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
172-497
               

               
Cow position:
               
chr16:17627055-17626731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr16:12634009-12633684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
202, 151
               

               
Conread position:
               
172-545
               

               
Cow position:
               
chr16:3634240-3633870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
197, 9
               

               
Conread position:
               
172-553
               

               
Cow position:
               
chr16:16548735-16548362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
172-567
               

               
Cow position:
               
chr16:39646671-39646292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
172-575
               

               
Cow position:
               
chr16:5741374-5740979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
173-332
               

               
Cow position:
               
chr16:4736464-4736619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
173-332
               

               
Cow position:
               
chr16:30358938-30359098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
173-463
               

               
Cow position:
               
chr16:25380372-25380660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
187, 6
               

               
Conread position:
               
173-512
               

               
Cow position:
               
chr16:14758864-14758516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
173-515
               

               
Cow position:
               
chr16:21905270-21904945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
199, 48
               

               
Conread position:
               
173-568
               

               
Cow position:
               
chr16:30715628-30715225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 183
               

               
Conread position:
               
173-569
               

               
Cow position:
               
chr16:43276142-43275754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 109
               

               
Conread position:
               
174-411
               

               
Cow position:
               
chr16:43674996-43674766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
174-547
               

               
Cow position:
               
chr16:52577580-52577212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
213, 63
               

               
Conread position:
               
175-532
               

               
Cow position:
               
chr16:30036869-30037228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 99
               

               
Conread position:
               
175-532
               

               
Cow position:
               
chr16:30096013-30096364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
175-532
               

               
Cow position:
               
chr16:32837428-32837780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
190, 17
               

               
Conread position:
               
176-553
               

               
Cow position:
               
chr16:16096856-16096486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 26
               

               
Conread position:
               
177-476
               

               
Cow position:
               
chr16:8076381-8076686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
179-556
               

               
Cow position:
               
chr16:36930200-36930576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
180-430
               

               
Cow position:
               
chr16:21761853-21762101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
197, 123
               

               
Conread position:
               
180-476
               

               
Cow position:
               
chr16:5836702-5836404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
189, 102
               

               
Conread position:
               
181-540
               

               
Cow position:
               
chr16:4626275-4626637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
193, 142
               

               
Conread position:
               
181-550
               

               
Cow position:
               
chr16:4399851-4399471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 88
               

               
Conread position:
               
181-550
               

               
Cow position:
               
chr16:13969251-13969629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
181-551
               

               
Cow position:
               
chr16:4902703-4902351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
194, 23
               

               
Conread position:
               
182-453
               

               
Cow position:
               
chr16:689818-689557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
182-476
               

               
Cow position:
               
chr16:9445074-9444786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
203, 74
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr16:15320369-15320722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr16:27014016-27013647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
182-566
               

               
Cow position:
               
chr16:18427298-18426920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
182-570
               

               
Cow position:
               
chr16:19977078-19976696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
182-572
               

               
Cow position:
               
chr16:43505696-43506069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 83
               

               
Conread position:
               
182-575
               

               
Cow position:
               
chr16:4499543-4499165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 50
               

               
Conread position:
               
183-394
               

               
Cow position:
               
chr16:16933233-16933028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr16:22207191-22206951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
183-459
               

               
Cow position:
               
chr16:41689807-41689537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
192, 136
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr16:38621069-38620787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
183-548
               

               
Cow position:
               
chr16:5845783-5845424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
189, 22
               

               
Conread position:
               
183-551
               

               
Cow position:
               
chr16:9973385-9973753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
192, 116
               

               
Conread position:
               
183-551
               

               
Cow position:
               
chr16:18402800-18402445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr16:39616836-39616491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
204, 80
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr16:48494440-48494809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
202, 141
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr16:51869753-51869385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
185, 139
               

               
Conread position:
               
183-554
               

               
Cow position:
               
chr16:15809092-15808720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
183-567
               

               
Cow position:
               
chr16:24826187-24825799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
188, 116
               

               
Conread position:
               
183-568
               

               
Cow position:
               
chr16:8315080-8315442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 26
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr16:7619071-7619470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
184-331
               

               
Cow position:
               
chr16:22824721-22824867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
184-511
               

               
Cow position:
               
chr16:39172035-39172378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
184-552
               

               
Cow position:
               
chr16:23738294-23737932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 152
               

               
Conread position:
               
184-575
               

               
Cow position:
               
chr16:11791123-11790739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
182, 81
               

               
Conread position:
               
184-575
               

               
Cow position:
               
chr16:46452630-46453034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
160, 235
               

               
Conread position:
               
185-376
               

               
Cow position:
               
chr16:55592675-55592484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
185-412
               

               
Cow position:
               
chr16:50667403-50667176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
180, 141
               

               
Conread position:
               
185-532
               

               
Cow position:
               
chr16:11422412-11422076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
202, 83
               

               
Conread position:
               
185-567
               

               
Cow position:
               
chr16:28833955-28833574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 137
               

               
Conread position:
               
186-444
               

               
Cow position:
               
chr16:27160753-27161000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
189, 133
               

               
Conread position:
               
186-490
               

               
Cow position:
               
chr16:46627726-46628028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
186-548
               

               
Cow position:
               
chr16:45702861-45703224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
188-573
               

               
Cow position:
               
chr16:11102712-11103098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 125
               

               
Conread position:
               
188-575
               

               
Cow position:
               
chr16:5636693-5636313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 74
               

               
Conread position:
               
191-370
               

               
Cow position:
               
chr16:38091117-38091287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr16:42176751-42176541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
191-515
               

               
Cow position:
               
chr16:32781469-32781145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
187, 70
               

               
Conread position:
               
191-553
               

               
Cow position:
               
chr16:4979908-4979563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
191-567
               

               
Cow position:
               
chr16:53627322-53627689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 135
               

               
Conread position:
               
192-389
               

               
Cow position:
               
chr16:30371716-30371507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 134
               

               
Conread position:
               
192-515
               

               
Cow position:
               
chr16:48369845-48370165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
192-532
               

               
Cow position:
               
chr16:36203514-36203849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
193-513
               

               
Cow position:
               
chr16:27261847-27262160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
167, 69
               

               
Conread position:
               
195-553
               

               
Cow position:
               
chr16:25965601-25965253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
195-569
               

               
Cow position:
               
chr16:570818-571185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
195-572
               

               
Cow position:
               
chr16:52889310-52889681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 9
               

               
Conread position:
               
196-553
               

               
Cow position:
               
chr16:17867382-17867728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
196-553
               

               
Cow position:
               
chr16:18141226-18141582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
182, 72
               

               
Conread position:
               
197-553
               

               
Cow position:
               
chr16:4698888-4699222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
173, 101
               

               
Conread position:
               
197-553
               

               
Cow position:
               
chr16:56445313-56445655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
222, 85
               

               
Conread position:
               
198-391
               

               
Cow position:
               
chr16:37719258-37719069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
198-544
               

               
Cow position:
               
chr16:41608706-41608361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
199-530
               

               
Cow position:
               
chr16:5477262-5477580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
202-532
               

               
Cow position:
               
chr16:52790149-52789827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
185, 33
               

               
Conread position:
               
203-467
               

               
Cow position:
               
chr16:50521570-50521310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
172, 19
               

               
Conread position:
               
204-532
               

               
Cow position:
               
chr16:32327751-32327418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 135
               

               
Conread position:
               
204-567
               

               
Cow position:
               
chr16:53891694-53892048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 14
               

               
Conread position:
               
205-553
               

               
Cow position:
               
chr16:42217598-42217943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
165, 82
               

               
Conread position:
               
206-532
               

               
Cow position:
               
chr16:53048643-53048317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 86
               

               
Conread position:
               
209-553
               

               
Cow position:
               
chr16:39513988-39514332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
210-532
               

               
Cow position:
               
chr16:12243474-12243789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
210-554
               

               
Cow position:
               
chr16:24672273-24672613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 5
               

               
Conread position:
               
214-576
               

               
Cow position:
               
chr16:9235399-9235756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
194, 18
               

               
Conread position:
               
216-553
               

               
Cow position:
               
chr16:30143119-30143465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
219-553
               

               
Cow position:
               
chr16:13752054-13752376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 101
               

               
Conread position:
               
220-477
               

               
Cow position:
               
chr16:54084113-54083855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr16:6887374-6887617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr16:33130537-33130291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 91
               

               
Conread position:
               
221-535
               

               
Cow position:
               
chr16:594148-594468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
221-549
               

               
Cow position:
               
chr16:37380346-37380022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
160, 107
               

               
Conread position:
               
221-553
               

               
Cow position:
               
chr16:31978110-31978441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
149, 105
               

               
Conread position:
               
221-575
               

               
Cow position:
               
chr16:19445852-19445511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
166, 19
               

               
Conread position:
               
222-531
               

               
Cow position:
               
chr16:675565-675261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
186, 103
               

               
Conread position:
               
222-569
               

               
Cow position:
               
chr16:33508147-33507795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
223-550
               

               
Cow position:
               
chr16:601019-600695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 12
               

               
Conread position:
               
223-554
               

               
Cow position:
               
chr16:18037023-18036712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
227-513
               

               
Cow position:
               
chr16:17606367-17606079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
105, 5
               

               
Conread position:
               
229-516
               

               
Cow position:
               
chr16:13232881-13233163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
230-553
               

               
Cow position:
               
chr16:4981310-4981624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
230-553
               

               
Cow position:
               
chr16:23875271-23875586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
230-553
               

               
Cow position:
               
chr16:47343542-47343220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
232-485
               

               
Cow position:
               
chr16:21369549-21369293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
235-465
               

               
Cow position:
               
chr16:10650826-10651056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
143, 88
               

               
Conread position:
               
238-507
               

               
Cow position:
               
chr16:39238005-39237733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 85
               

               
Conread position:
               
244-539
               

               
Cow position:
               
chr16:11274956-11274668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
177, 79
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr16:11619802-11619478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
246-496
               

               
Cow position:
               
chr16:49404108-49404353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 72
               

               
Conread position:
               
246-573
               

               
Cow position:
               
chr16:4145114-4144794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
256-549
               

               
Cow position:
               
chr16:26342307-26342027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
259-515
               

               
Cow position:
               
chr16:13973249-13973498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
267-515
               

               
Cow position:
               
chr16:27249434-27249192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
267-551
               

               
Cow position:
               
chr16:46434086-46434367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
267-575
               

               
Cow position:
               
chr16:13791547-13791239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
268-488
               

               
Cow position:
               
chr16:7496226-7496012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
268-491
               

               
Cow position:
               
chr16:33790799-33791022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
268-514
               

               
Cow position:
               
chr16:30706136-30705890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
268-530
               

               
Cow position:
               
chr16:4372464-4372728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
268-550
               

               
Cow position:
               
chr16:23990441-23990737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
268-553
               

               
Cow position:
               
chr16:43537769-43537485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
268-571
               

               
Cow position:
               
chr16:15189215-15188928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
269-539
               

               
Cow position:
               
chr16:25287641-25287932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
269-554
               

               
Cow position:
               
chr16:24148189-24147901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
272-486
               

               
Cow position:
               
chr16:8236297-8236507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 36
               

               
Conread position:
               
274-465
               

               
Cow position:
               
chr16:7034352-7034151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
276-547
               

               
Cow position:
               
chr16:47620410-47620133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
280-463
               

               
Cow position:
               
chr16:33357655-33357840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
280-553
               

               
Cow position:
               
chr16:30311089-30311362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
280-569
               

               
Cow position:
               
chr16:8807076-8807358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
282-542
               

               
Cow position:
               
chr16:53547562-53547830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
300-552
               

               
Cow position:
               
chr16:19152707-19152445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
300-553
               

               
Cow position:
               
chr16:52219090-52218836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
307-536
               

               
Cow position:
               
chr16:4277722-4277952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
307-543
               

               
Cow position:
               
chr16:47336733-47336487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 238
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr16:32384820-32385074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr16:39385408-39385148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 242
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr16:42253568-42253823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
307-554
               

               
Cow position:
               
chr16:53613300-53613045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
308-553
               

               
Cow position:
               
chr16:7082739-7082986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
317-546
               

               
Cow position:
               
chr16:54515720-54515481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr16:34168588-34168342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
317-572
               

               
Cow position:
               
chr16:27005193-27004929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
59, 228
               

               
Conread position:
               
319-531
               

               
Cow position:
               
chr16:35168713-35168492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
322-463
               

               
Cow position:
               
chr16:9136161-9136012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
324-553
               

               
Cow position:
               
chr16:18679183-18678944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 221
               

               
Conread position:
               
324-572
               

               
Cow position:
               
chr16:15867745-15868015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 254
               

               
Conread position:
               
325-532
               

               
Cow position:
               
chr16:23810894-23810688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
325-566
               

               
Cow position:
               
chr16:54294985-54294747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
325-569
               

               
Cow position:
               
chr16:26501138-26500893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
325-576
               

               
Cow position:
               
chr16:55308561-55308804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
326-553
               

               
Cow position:
               
chr16:16424623-16424857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
327-530
               

               
Cow position:
               
chr16:2396306-2396095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
327-553
               

               
Cow position:
               
chr16:11425163-11425393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
328-575
               

               
Cow position:
               
chr16:17948202-17948457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
329-455
               

               
Cow position:
               
chr16:42072754-42072885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
329-515
               

               
Cow position:
               
chr16:31159592-31159795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr16:51530988-51531217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
329-542
               

               
Cow position:
               
chr16:50189611-50189836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 218
               

               
Conread position:
               
329-551
               

               
Cow position:
               
chr16:41037670-41037433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr16:9790651-9790884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 198
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr16:29067141-29066915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr16:44973474-44973243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
329-554
               

               
Cow position:
               
chr16:50711923-50712161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
329-567
               

               
Cow position:
               
chr16:4503262-4503012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 217
               

               
Conread position:
               
329-572
               

               
Cow position:
               
chr16:4103181-4103427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 177
               

               
Conread position:
               
329-575
               

               
Cow position:
               
chr16:22868198-22868449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 195
               

               
Conread position:
               
330-532
               

               
Cow position:
               
chr16:4875972-4875764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 143
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr16:5446828-5446606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 77
               

               
Conread position:
               
331-539
               

               
Cow position:
               
chr16:8812105-8812328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 188
               

               
Conread position:
               
331-551
               

               
Cow position:
               
chr16:14028650-14028872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr16:11620834-11621056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr16:47509999-47510221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
331-567
               

               
Cow position:
               
chr16:24228373-24228618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 212
               

               
Conread position:
               
331-571
               

               
Cow position:
               
chr16:7997644-7997882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
332-549
               

               
Cow position:
               
chr16:4911451-4911657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
332-553
               

               
Cow position:
               
chr16:3333391-3333174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
332-553
               

               
Cow position:
               
chr16:38903468-38903687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 150
               

               
Conread position:
               
333-504
               

               
Cow position:
               
chr16:26846191-26846027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
333-552
               

               
Cow position:
               
chr16:30209730-30209511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
333-572
               

               
Cow position:
               
chr16:51399771-51400017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 210
               

               
Conread position:
               
334-553
               

               
Cow position:
               
chr16:43804466-43804244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
337-554
               

               
Cow position:
               
chr16:49216012-49216215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
340-553
               

               
Cow position:
               
chr16:30939702-30939481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 203
               

               
Conread position:
               
340-554
               

               
Cow position:
               
chr16:33752164-33751944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
343-553
               

               
Cow position:
               
chr16:49141600-49141811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
343-575
               

               
Cow position:
               
chr16:28816130-28816377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
349-567
               

               
Cow position:
               
chr16:32132484-32132261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
353-550
               

               
Cow position:
               
chr16:18632417-18632615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
353-575
               

               
Cow position:
               
chr16:13043751-13043521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 189
               

               
Conread position:
               
354-551
               

               
Cow position:
               
chr16:47728976-47728772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 163
               

               
Conread position:
               
355-551
               

               
Cow position:
               
chr16:51043576-51043382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
355-570
               

               
Cow position:
               
chr16:589964-590180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
358-554
               

               
Cow position:
               
chr16:8706611-8706805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
369-541
               

               
Cow position:
               
chr16:33235197-33235376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
374-554
               

               
Cow position:
               
chr16:25484294-25484114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
374-569
               

               
Cow position:
               
chr16:16177745-16177548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 184
               

               
Conread position:
               
374-577
               

               
Cow position:
               
chr16:901953-902163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
375-553
               

               
Cow position:
               
chr16:5293588-5293410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
380-553
               

               
Cow position:
               
chr16:14799826-14799993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
380-553
               

               
Cow position:
               
chr16:55047185-55047357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
381-577
               

               
Cow position:
               
chr16:11449684-11449491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
384-553
               

               
Cow position:
               
chr16:16232005-16231830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
385-553
               

               
Cow position:
               
chr16:45157526-45157693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
389-568
               

               
Cow position:
               
chr16:33777728-33777550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
403-553
               

               
Cow position:
               
chr16:24403630-24403477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
407-553
               

               
Cow position:
               
chr16:18051986-18051837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr16:11099910-11100048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr16:44247889-44248030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr16:33405870-33406033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
425-553
               

               
Cow position:
               
chr16:8796353-8796482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               
Show alignments to all cow chromosomes.