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Cow genome map

           
Conread name:
           
Pig2-110D05
        

               
Conread position:
               
15-549
               

               
Cow position:
               
chr2:13580525-13579995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 198
               

               
Conread position:
               
61-575
               

               
Cow position:
               
chr2:6356120-6356660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
62-340
               

               
Cow position:
               
chr2:28301443-28301166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
62-553
               

               
Cow position:
               
chr2:53650253-53649774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr2:60091194-60091433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
63-394
               

               
Cow position:
               
chr2:8843579-8843918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 174
               

               
Conread position:
               
63-530
               

               
Cow position:
               
chr2:1304189-1303718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
64-553
               

               
Cow position:
               
chr2:76562366-76561860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 260
               

               
Conread position:
               
65-376
               

               
Cow position:
               
chr2:12839791-12840111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
65-552
               

               
Cow position:
               
chr2:56828323-56828819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
61, 239
               

               
Conread position:
               
67-295
               

               
Cow position:
               
chr2:72315574-72315810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
67-470
               

               
Cow position:
               
chr2:46942122-46942531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
67-547
               

               
Cow position:
               
chr2:15769280-15769736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
68-547
               

               
Cow position:
               
chr2:14555537-14555997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
68-553
               

               
Cow position:
               
chr2:57776585-57776097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
68-574
               

               
Cow position:
               
chr2:52484735-52485252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
69-553
               

               
Cow position:
               
chr2:33262399-33262868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 37
               

               
Conread position:
               
70-319
               

               
Cow position:
               
chr2:43991003-43990750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
70-451
               

               
Cow position:
               
chr2:58135157-58135543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 237
               

               
Conread position:
               
70-553
               

               
Cow position:
               
chr2:41248794-41248316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
71-294
               

               
Cow position:
               
chr2:16668164-16667940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
71-552
               

               
Cow position:
               
chr2:42970343-42969844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 172
               

               
Conread position:
               
73-484
               

               
Cow position:
               
chr2:73359882-73360291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
75-515
               

               
Cow position:
               
chr2:39369090-39368598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
76-285
               

               
Cow position:
               
chr2:70746970-70746772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
76-289
               

               
Cow position:
               
chr2:19017678-19017459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
76-297
               

               
Cow position:
               
chr2:6340890-6341102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr2:46162179-46161893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
76-532
               

               
Cow position:
               
chr2:4071128-4070682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
77-297
               

               
Cow position:
               
chr2:21950197-21949974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
77-449
               

               
Cow position:
               
chr2:76762443-76762077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
78-320
               

               
Cow position:
               
chr2:43591150-43591396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 165
               

               
Conread position:
               
78-324
               

               
Cow position:
               
chr2:71486999-71486751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
78-406
               

               
Cow position:
               
chr2:16018029-16018325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
78-514
               

               
Cow position:
               
chr2:38362159-38362587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 25
               

               
Conread position:
               
78-532
               

               
Cow position:
               
chr2:793855-793414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
78-553
               

               
Cow position:
               
chr2:84480277-84480772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
78-558
               

               
Cow position:
               
chr2:41057319-41057759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr2:6952687-6952465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
79-321
               

               
Cow position:
               
chr2:52596513-52596749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
79-502
               

               
Cow position:
               
chr2:44931034-44931469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
80-249
               

               
Cow position:
               
chr2:61975561-61975394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
80-250
               

               
Cow position:
               
chr2:79245619-79245446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
80-256
               

               
Cow position:
               
chr2:19843008-19842828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
80-289
               

               
Cow position:
               
chr2:2689967-2689761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
80-554
               

               
Cow position:
               
chr2:7533555-7534030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
80-567
               

               
Cow position:
               
chr2:43474402-43473923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
81-260
               

               
Cow position:
               
chr2:68998531-68998355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
81-261
               

               
Cow position:
               
chr2:31123088-31122918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
81-273
               

               
Cow position:
               
chr2:2754805-2754990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
81-283
               

               
Cow position:
               
chr2:12186849-12186644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
81-302
               

               
Cow position:
               
chr2:44063560-44063779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 23
               

               
Conread position:
               
81-308
               

               
Cow position:
               
chr2:26361977-26361742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
81-336
               

               
Cow position:
               
chr2:13672736-13672486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
81-456
               

               
Cow position:
               
chr2:41622707-41622327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 213
               

               
Conread position:
               
81-553
               

               
Cow position:
               
chr2:33402265-33402741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
52, 193
               

               
Conread position:
               
81-573
               

               
Cow position:
               
chr2:46033558-46033057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
81-574
               

               
Cow position:
               
chr2:54790503-54790003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 244
               

               
Conread position:
               
82-260
               

               
Cow position:
               
chr2:2031788-2031974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
82-260
               

               
Cow position:
               
chr2:74070547-74070369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
82-263
               

               
Cow position:
               
chr2:4096375-4096551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
82-274
               

               
Cow position:
               
chr2:36124655-36124456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
82-277
               

               
Cow position:
               
chr2:70449242-70449046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 169
               

               
Conread position:
               
82-283
               

               
Cow position:
               
chr2:41423011-41422809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
82-286
               

               
Cow position:
               
chr2:1976513-1976300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
82-289
               

               
Cow position:
               
chr2:39067715-39067505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
82-294
               

               
Cow position:
               
chr2:34591138-34591349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
82-297
               

               
Cow position:
               
chr2:29394786-29395009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
82-320
               

               
Cow position:
               
chr2:30954374-30954619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
82-324
               

               
Cow position:
               
chr2:37619689-37619941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
82-326
               

               
Cow position:
               
chr2:50913793-50914041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 191
               

               
Conread position:
               
82-328
               

               
Cow position:
               
chr2:8576220-8575972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
82-331
               

               
Cow position:
               
chr2:19320220-19319970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
82-337
               

               
Cow position:
               
chr2:15219331-15219073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
82-444
               

               
Cow position:
               
chr2:45367500-45367150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
82-489
               

               
Cow position:
               
chr2:48525312-48525740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 233
               

               
Conread position:
               
82-515
               

               
Cow position:
               
chr2:80275074-80275508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
82-532
               

               
Cow position:
               
chr2:82310991-82311439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
288, 51
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr2:13354903-13354425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
82-552
               

               
Cow position:
               
chr2:46262655-46262193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr2:14709908-14710358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr2:27359257-27358790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr2:32048697-32048236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
82-570
               

               
Cow position:
               
chr2:30640408-30639923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
82-574
               

               
Cow position:
               
chr2:41158177-41157689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
83-243
               

               
Cow position:
               
chr2:39187588-39187425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
83-277
               

               
Cow position:
               
chr2:15400725-15400928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
83-280
               

               
Cow position:
               
chr2:67047637-67047436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
83-285
               

               
Cow position:
               
chr2:16847404-16847197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 188
               

               
Conread position:
               
83-322
               

               
Cow position:
               
chr2:14848067-14847841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
83-332
               

               
Cow position:
               
chr2:4921714-4921965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
84-250
               

               
Cow position:
               
chr2:73981845-73981679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
84-272
               

               
Cow position:
               
chr2:47195184-47194987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
84-532
               

               
Cow position:
               
chr2:45935752-45936188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
84-575
               

               
Cow position:
               
chr2:27178869-27178385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
85-254
               

               
Cow position:
               
chr2:55958869-55959040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
85-274
               

               
Cow position:
               
chr2:29049998-29049812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr2:2827962-2827716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
85-334
               

               
Cow position:
               
chr2:9725883-9726135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
85-411
               

               
Cow position:
               
chr2:48634834-48635152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
85-524
               

               
Cow position:
               
chr2:70664215-70663788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
85-533
               

               
Cow position:
               
chr2:81348679-81349119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
85-553
               

               
Cow position:
               
chr2:51594988-51594513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
85-554
               

               
Cow position:
               
chr2:36963736-36963281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
86-256
               

               
Cow position:
               
chr2:43139442-43139616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
86-282
               

               
Cow position:
               
chr2:53567700-53567507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
86-454
               

               
Cow position:
               
chr2:69199108-69199469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
86-507
               

               
Cow position:
               
chr2:44051524-44051095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 184
               

               
Conread position:
               
87-284
               

               
Cow position:
               
chr2:69142718-69142526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr2:5755087-5755284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 91
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr2:16109535-16109731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
87-430
               

               
Cow position:
               
chr2:60691096-60690755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
87-537
               

               
Cow position:
               
chr2:15250382-15249945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr2:192253-192711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr2:55526557-55527014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
88-236
               

               
Cow position:
               
chr2:68239417-68239264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
88-252
               

               
Cow position:
               
chr2:82304161-82303996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
88-326
               

               
Cow position:
               
chr2:38837300-38837545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 242
               

               
Conread position:
               
88-327
               

               
Cow position:
               
chr2:16488201-16487957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
88-334
               

               
Cow position:
               
chr2:69109131-69109386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
88-385
               

               
Cow position:
               
chr2:19502259-19502560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
88-453
               

               
Cow position:
               
chr2:7573301-7573653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 91
               

               
Conread position:
               
88-478
               

               
Cow position:
               
chr2:12686582-12686966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
88-575
               

               
Cow position:
               
chr2:64323448-64322982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
89-227
               

               
Cow position:
               
chr2:15720848-15720705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
89-245
               

               
Cow position:
               
chr2:23494010-23493852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
89-249
               

               
Cow position:
               
chr2:74012854-74013023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
89-257
               

               
Cow position:
               
chr2:67745826-67745658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
89-258
               

               
Cow position:
               
chr2:46610167-46609995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-261
               

               
Cow position:
               
chr2:44313503-44313683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr2:47784999-47784808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
89-278
               

               
Cow position:
               
chr2:56010943-56011128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
89-279
               

               
Cow position:
               
chr2:66561825-66562023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr2:36117458-36117261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr2:46300815-46300623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
89-289
               

               
Cow position:
               
chr2:64465567-64465768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
89-317
               

               
Cow position:
               
chr2:75462535-75462309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
89-319
               

               
Cow position:
               
chr2:39350276-39350515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
89-320
               

               
Cow position:
               
chr2:57802269-57802512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr2:4644482-4644247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr2:60260773-60261016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-329
               

               
Cow position:
               
chr2:46614617-46614371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 205
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr2:15734632-15734380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-333
               

               
Cow position:
               
chr2:50013570-50013322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
89-336
               

               
Cow position:
               
chr2:37121468-37121226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
173, 44
               

               
Conread position:
               
89-362
               

               
Cow position:
               
chr2:13013292-13013035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
89-370
               

               
Cow position:
               
chr2:10628317-10628598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
89-417
               

               
Cow position:
               
chr2:40597785-40597466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
44, 174
               

               
Conread position:
               
89-456
               

               
Cow position:
               
chr2:46135438-46135058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 215
               

               
Conread position:
               
89-464
               

               
Cow position:
               
chr2:60910398-60910036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
89-474
               

               
Cow position:
               
chr2:34749777-34750154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
89-489
               

               
Cow position:
               
chr2:63331605-63332003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
89-497
               

               
Cow position:
               
chr2:45624243-45623818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
89-498
               

               
Cow position:
               
chr2:18997929-18997526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 212
               

               
Conread position:
               
89-504
               

               
Cow position:
               
chr2:1709177-1708780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
89-512
               

               
Cow position:
               
chr2:19294802-19294388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
89-514
               

               
Cow position:
               
chr2:46051093-46051518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
89-515
               

               
Cow position:
               
chr2:68970960-68970517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 248
               

               
Conread position:
               
89-529
               

               
Cow position:
               
chr2:23713087-23712660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 203
               

               
Conread position:
               
89-530
               

               
Cow position:
               
chr2:44229495-44229921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
89-532
               

               
Cow position:
               
chr2:26042045-26042472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
89-542
               

               
Cow position:
               
chr2:28710798-28711228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
89-546
               

               
Cow position:
               
chr2:47090978-47090519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 245
               

               
Conread position:
               
89-549
               

               
Cow position:
               
chr2:6039228-6038756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
89-550
               

               
Cow position:
               
chr2:14826492-14826036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 273
               

               
Conread position:
               
89-550
               

               
Cow position:
               
chr2:47403420-47402956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
89-551
               

               
Cow position:
               
chr2:16839849-16839383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
89-552
               

               
Cow position:
               
chr2:20900247-20900720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr2:59396838-59397311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 163
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr2:67595803-67596268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 206
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr2:71437165-71437636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
89-572
               

               
Cow position:
               
chr2:13369870-13369391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 241
               

               
Conread position:
               
89-575
               

               
Cow position:
               
chr2:31155901-31155442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
89-575
               

               
Cow position:
               
chr2:58074133-58074619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
89-577
               

               
Cow position:
               
chr2:24393477-24393964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 159
               

               
Conread position:
               
90-239
               

               
Cow position:
               
chr2:46239982-46240128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
90-263
               

               
Cow position:
               
chr2:52151046-52151221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
90-284
               

               
Cow position:
               
chr2:70771665-70771867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 175
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chr2:37652464-37652260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
90-285
               

               
Cow position:
               
chr2:75637519-75637724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
90-289
               

               
Cow position:
               
chr2:74078906-74079097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
90-293
               

               
Cow position:
               
chr2:38947238-38947436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
90-297
               

               
Cow position:
               
chr2:39642960-39642750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
90-345
               

               
Cow position:
               
chr2:54253571-54253334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
90-376
               

               
Cow position:
               
chr2:46383266-46383533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
90-398
               

               
Cow position:
               
chr2:65036082-65036378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
90-408
               

               
Cow position:
               
chr2:19137679-19137998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 236
               

               
Conread position:
               
90-421
               

               
Cow position:
               
chr2:4016648-4016958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
90-442
               

               
Cow position:
               
chr2:46052713-46052365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 193
               

               
Conread position:
               
90-488
               

               
Cow position:
               
chr2:17328957-17328560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
90-496
               

               
Cow position:
               
chr2:16505257-16505674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
90-505
               

               
Cow position:
               
chr2:26851363-26850956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
90-507
               

               
Cow position:
               
chr2:29160122-29159694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 241
               

               
Conread position:
               
90-532
               

               
Cow position:
               
chr2:56350700-56351150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 235
               

               
Conread position:
               
90-552
               

               
Cow position:
               
chr2:15298747-15298290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
90-552
               

               
Cow position:
               
chr2:54700669-54700198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 238
               

               
Conread position:
               
90-553
               

               
Cow position:
               
chr2:46358039-46357593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
90-553
               

               
Cow position:
               
chr2:55632985-55632523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
90-567
               

               
Cow position:
               
chr2:46312648-46312184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
90-575
               

               
Cow position:
               
chr2:18621624-18621133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
91-245
               

               
Cow position:
               
chr2:58336014-58336171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
91-285
               

               
Cow position:
               
chr2:30127079-30127279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
91-299
               

               
Cow position:
               
chr2:63568920-63568710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 194
               

               
Conread position:
               
91-320
               

               
Cow position:
               
chr2:32488462-32488681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
91-322
               

               
Cow position:
               
chr2:22370737-22370968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr2:9543522-9543287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
91-507
               

               
Cow position:
               
chr2:23301939-23301539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
91-511
               

               
Cow position:
               
chr2:50408864-50408473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
91-532
               

               
Cow position:
               
chr2:65269479-65269931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
91-539
               

               
Cow position:
               
chr2:13604662-13604226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
91-551
               

               
Cow position:
               
chr2:28820582-28820113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 233
               

               
Conread position:
               
91-551
               

               
Cow position:
               
chr2:64292520-64292949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr2:7720721-7721156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr2:14634395-14633935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 236
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr2:27173564-27173115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 40
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr2:29801936-29802360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 16
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr2:71799873-71800343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
91-555
               

               
Cow position:
               
chr2:43577568-43578051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 202
               

               
Conread position:
               
92-236
               

               
Cow position:
               
chr2:33603593-33603447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
92-248
               

               
Cow position:
               
chr2:47123345-47123510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
92-281
               

               
Cow position:
               
chr2:485785-485592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
92-285
               

               
Cow position:
               
chr2:2486054-2485856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr2:26694819-26694615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr2:55004493-55004295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
92-421
               

               
Cow position:
               
chr2:40257206-40257535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
92-517
               

               
Cow position:
               
chr2:70704462-70704033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
92-539
               

               
Cow position:
               
chr2:78116150-78116586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
92-542
               

               
Cow position:
               
chr2:31355913-31355462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 239
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr2:7194418-7193950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr2:20947578-20947121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr2:42183574-42183119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr2:76110601-76110143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
92-567
               

               
Cow position:
               
chr2:21545-22006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
92-567
               

               
Cow position:
               
chr2:46227673-46227201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
93-260
               

               
Cow position:
               
chr2:3773118-3773290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
93-261
               

               
Cow position:
               
chr2:39483695-39483519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-261
               

               
Cow position:
               
chr2:47165621-47165794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
93-278
               

               
Cow position:
               
chr2:3739635-3739826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
93-288
               

               
Cow position:
               
chr2:78379214-78379410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
93-289
               

               
Cow position:
               
chr2:53653062-53652859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
93-294
               

               
Cow position:
               
chr2:39059287-39059088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
93-297
               

               
Cow position:
               
chr2:46053682-46053470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-324
               

               
Cow position:
               
chr2:16889848-16890080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
93-370
               

               
Cow position:
               
chr2:22042763-22042473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 200
               

               
Conread position:
               
93-376
               

               
Cow position:
               
chr2:22677403-22677124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
93-408
               

               
Cow position:
               
chr2:45642282-45642595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
93-512
               

               
Cow position:
               
chr2:39514246-39513813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
93-551
               

               
Cow position:
               
chr2:9063476-9063020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr2:45498994-45499449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 234
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr2:51799129-51799573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr2:82580727-82581183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
93-554
               

               
Cow position:
               
chr2:992359-991919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
93-569
               

               
Cow position:
               
chr2:44482464-44482913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 11
               

               
Conread position:
               
93-571
               

               
Cow position:
               
chr2:26438521-26438993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
93-572
               

               
Cow position:
               
chr2:79754-80231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
93-573
               

               
Cow position:
               
chr2:24594070-24593622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
93-573
               

               
Cow position:
               
chr2:27337569-27338048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
93-574
               

               
Cow position:
               
chr2:24271422-24270953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
94-274
               

               
Cow position:
               
chr2:38619229-38619413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
94-277
               

               
Cow position:
               
chr2:21953326-21953508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
94-289
               

               
Cow position:
               
chr2:8245708-8245524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
94-297
               

               
Cow position:
               
chr2:8139127-8138921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
94-300
               

               
Cow position:
               
chr2:18243742-18243535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
94-320
               

               
Cow position:
               
chr2:39363216-39362979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
94-324
               

               
Cow position:
               
chr2:32988778-32988538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-336
               

               
Cow position:
               
chr2:6311457-6311221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr2:994166-994404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr2:39371618-39371377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
94-371
               

               
Cow position:
               
chr2:22371571-22371269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
94-416
               

               
Cow position:
               
chr2:15348604-15348283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 239
               

               
Conread position:
               
94-444
               

               
Cow position:
               
chr2:53500838-53501170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
94-451
               

               
Cow position:
               
chr2:43131306-43130965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
94-454
               

               
Cow position:
               
chr2:47056102-47055754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
94-466
               

               
Cow position:
               
chr2:51097876-51098258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
94-474
               

               
Cow position:
               
chr2:25757424-25757802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
94-476
               

               
Cow position:
               
chr2:39632712-39632321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
94-552
               

               
Cow position:
               
chr2:33496993-33497455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 200
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr2:1073729-1073279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr2:52171439-52170999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
94-554
               

               
Cow position:
               
chr2:9173094-9173514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
292, 12
               

               
Conread position:
               
94-560
               

               
Cow position:
               
chr2:46331272-46330796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
94-567
               

               
Cow position:
               
chr2:32115270-32114798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 99
               

               
Conread position:
               
94-569
               

               
Cow position:
               
chr2:34695422-34694971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr2:43624330-43624795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
94-573
               

               
Cow position:
               
chr2:76340440-76340933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 273
               

               
Conread position:
               
95-221
               

               
Cow position:
               
chr2:22496107-22496232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
95-261
               

               
Cow position:
               
chr2:64810-64971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
95-263
               

               
Cow position:
               
chr2:44103460-44103631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
95-271
               

               
Cow position:
               
chr2:19518947-19518779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
95-279
               

               
Cow position:
               
chr2:65603432-65603619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
95-280
               

               
Cow position:
               
chr2:13317791-13317599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
95-295
               

               
Cow position:
               
chr2:46317079-46316874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr2:45641079-45640887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
95-412
               

               
Cow position:
               
chr2:29735033-29734714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
95-424
               

               
Cow position:
               
chr2:10505405-10505747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
95-425
               

               
Cow position:
               
chr2:51181568-51181899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 237
               

               
Conread position:
               
95-442
               

               
Cow position:
               
chr2:33471790-33472127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
95-553
               

               
Cow position:
               
chr2:12949958-12950417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
95-553
               

               
Cow position:
               
chr2:19211854-19212295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
95-571
               

               
Cow position:
               
chr2:18857951-18858403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
95-575
               

               
Cow position:
               
chr2:19494420-19493939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
96-224
               

               
Cow position:
               
chr2:55660929-55660799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
96-263
               

               
Cow position:
               
chr2:70824030-70824198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
96-459
               

               
Cow position:
               
chr2:73544698-73545053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
96-553
               

               
Cow position:
               
chr2:42192631-42192192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
97-285
               

               
Cow position:
               
chr2:56102129-56102319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
97-517
               

               
Cow position:
               
chr2:15597277-15597688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
97-551
               

               
Cow position:
               
chr2:42255633-42255181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
97-553
               

               
Cow position:
               
chr2:2673735-2673273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 210
               

               
Conread position:
               
97-553
               

               
Cow position:
               
chr2:70908128-70908567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
98-240
               

               
Cow position:
               
chr2:13722087-13721949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
98-245
               

               
Cow position:
               
chr2:1205509-1205356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
98-254
               

               
Cow position:
               
chr2:85392039-85392197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
98-274
               

               
Cow position:
               
chr2:47111830-47111654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
98-281
               

               
Cow position:
               
chr2:77140378-77140564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
98-283
               

               
Cow position:
               
chr2:39384466-39384643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
98-289
               

               
Cow position:
               
chr2:9062884-9062685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
98-289
               

               
Cow position:
               
chr2:56837448-56837650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
98-290
               

               
Cow position:
               
chr2:30203020-30203214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
98-290
               

               
Cow position:
               
chr2:73282373-73282563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 169
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr2:38162596-38162797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr2:69092951-69093148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr2:80848287-80848085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
98-313
               

               
Cow position:
               
chr2:5604724-5604509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
98-344
               

               
Cow position:
               
chr2:50449706-50449955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 230
               

               
Conread position:
               
98-413
               

               
Cow position:
               
chr2:30351499-30351811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 209
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr2:76861247-76861575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 243
               

               
Conread position:
               
98-461
               

               
Cow position:
               
chr2:46119564-46119922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
98-503
               

               
Cow position:
               
chr2:46120441-46120841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 179
               

               
Conread position:
               
98-515
               

               
Cow position:
               
chr2:21380200-21380619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
98-517
               

               
Cow position:
               
chr2:69419386-69419796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
98-532
               

               
Cow position:
               
chr2:38117821-38118223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
98-533
               

               
Cow position:
               
chr2:77211982-77212415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
98-552
               

               
Cow position:
               
chr2:26500735-26501191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:777480-777941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:1658712-1658247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:13002000-13001559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:33250885-33251327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:45478398-45478846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:71624194-71624628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr2:76968960-76969430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
35, 181
               

               
Conread position:
               
98-554
               

               
Cow position:
               
chr2:39590459-39590002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 176
               

               
Conread position:
               
98-554
               

               
Cow position:
               
chr2:74249019-74249481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 213
               

               
Conread position:
               
98-574
               

               
Cow position:
               
chr2:51638737-51638275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
98-575
               

               
Cow position:
               
chr2:14349982-14349520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
98-575
               

               
Cow position:
               
chr2:44168270-44167809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
98-575
               

               
Cow position:
               
chr2:66479996-66480452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 31
               

               
Conread position:
               
99-274
               

               
Cow position:
               
chr2:1364394-1364576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
99-294
               

               
Cow position:
               
chr2:13695035-13695238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
99-370
               

               
Cow position:
               
chr2:46124485-46124765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
99-516
               

               
Cow position:
               
chr2:40728562-40728141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 234
               

               
Conread position:
               
99-532
               

               
Cow position:
               
chr2:16428197-16428634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 167
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr2:29612735-29612313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
100-263
               

               
Cow position:
               
chr2:10842551-10842709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
100-489
               

               
Cow position:
               
chr2:66149517-66149129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
100-497
               

               
Cow position:
               
chr2:41019015-41019415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
100-514
               

               
Cow position:
               
chr2:6281822-6282230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr2:47990621-47990188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
100-553
               

               
Cow position:
               
chr2:56846949-56846500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
101-368
               

               
Cow position:
               
chr2:64213243-64213002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
101-462
               

               
Cow position:
               
chr2:2931259-2930891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 233
               

               
Conread position:
               
102-553
               

               
Cow position:
               
chr2:35092507-35092940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
103-515
               

               
Cow position:
               
chr2:15063072-15063483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
104-289
               

               
Cow position:
               
chr2:51099776-51099967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 172
               

               
Conread position:
               
104-308
               

               
Cow position:
               
chr2:78669725-78669937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
104-327
               

               
Cow position:
               
chr2:24722079-24722302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
219, 75
               

               
Conread position:
               
104-432
               

               
Cow position:
               
chr2:41040509-41040839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
29, 188
               

               
Conread position:
               
104-458
               

               
Cow position:
               
chr2:45542205-45542553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
104-493
               

               
Cow position:
               
chr2:6444210-6443833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
104-553
               

               
Cow position:
               
chr2:42801233-42800795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 155
               

               
Conread position:
               
104-575
               

               
Cow position:
               
chr2:15674727-15674274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
105-250
               

               
Cow position:
               
chr2:30384068-30384221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
105-283
               

               
Cow position:
               
chr2:21171799-21171618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
105-415
               

               
Cow position:
               
chr2:68328655-68328958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
106-240
               

               
Cow position:
               
chr2:69003240-69003105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
106-244
               

               
Cow position:
               
chr2:67810844-67810989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
106-251
               

               
Cow position:
               
chr2:51024009-51024154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
106-261
               

               
Cow position:
               
chr2:1888480-1888632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr2:5479507-5479659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr2:49932017-49931863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr2:72612625-72612471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
106-268
               

               
Cow position:
               
chr2:1333506-1333345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
106-273
               

               
Cow position:
               
chr2:10710128-10710290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
106-281
               

               
Cow position:
               
chr2:44215696-44215519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
106-290
               

               
Cow position:
               
chr2:44198076-44197882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 190
               

               
Conread position:
               
106-294
               

               
Cow position:
               
chr2:13468412-13468218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr2:25922607-25922410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr2:21049139-21049346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-317
               

               
Cow position:
               
chr2:46378596-46378814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 187
               

               
Conread position:
               
106-322
               

               
Cow position:
               
chr2:53491265-53491476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr2:46164306-46164527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
106-336
               

               
Cow position:
               
chr2:15872125-15871899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
201, 73
               

               
Conread position:
               
106-337
               

               
Cow position:
               
chr2:29290122-29290352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
106-337
               

               
Cow position:
               
chr2:56003431-56003196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-338
               

               
Cow position:
               
chr2:45138247-45138474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-342
               

               
Cow position:
               
chr2:24530559-24530325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-376
               

               
Cow position:
               
chr2:57733623-57733361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
106-394
               

               
Cow position:
               
chr2:80177402-80177674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-398
               

               
Cow position:
               
chr2:40410342-40410046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 219
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr2:39229004-39228700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
106-416
               

               
Cow position:
               
chr2:67576298-67575983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
106-437
               

               
Cow position:
               
chr2:80770298-80769981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
106-439
               

               
Cow position:
               
chr2:72003753-72004085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
106-445
               

               
Cow position:
               
chr2:32660377-32660029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr2:38785406-38785759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
106-456
               

               
Cow position:
               
chr2:46129970-46130305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
106-463
               

               
Cow position:
               
chr2:387580-387935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 222
               

               
Conread position:
               
106-465
               

               
Cow position:
               
chr2:78249935-78249572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
106-479
               

               
Cow position:
               
chr2:19328727-19328366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
106-502
               

               
Cow position:
               
chr2:43960375-43959973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
106-514
               

               
Cow position:
               
chr2:5300794-5300372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
106-531
               

               
Cow position:
               
chr2:17114546-17114968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 33
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr2:69579480-69579914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 201
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr2:75227400-75226966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
27, 226
               

               
Conread position:
               
106-550
               

               
Cow position:
               
chr2:49467825-49467370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
106-552
               

               
Cow position:
               
chr2:67302214-67301785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:21003364-21002935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:31749771-31750221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 224
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:32264198-32264648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:37009602-37009166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 186
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:37347980-37347548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
27, 207
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:38658601-38659034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:38886446-38886905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:38965805-38965367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 25
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:41452429-41451978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 195
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:43995126-43994682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:45574813-45575248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr2:49428580-49428134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
106-554
               

               
Cow position:
               
chr2:32431542-32431976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
106-556
               

               
Cow position:
               
chr2:17966846-17967288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
106-556
               

               
Cow position:
               
chr2:36077556-36077093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
27, 125
               

               
Conread position:
               
106-558
               

               
Cow position:
               
chr2:21382653-21383114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
106-567
               

               
Cow position:
               
chr2:276862-276432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
106-569
               

               
Cow position:
               
chr2:46188901-46189359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 220
               

               
Conread position:
               
106-571
               

               
Cow position:
               
chr2:73094609-73095053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
106-574
               

               
Cow position:
               
chr2:22371759-22372217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
106-574
               

               
Cow position:
               
chr2:29343208-29343701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
29, 293
               

               
Conread position:
               
106-575
               

               
Cow position:
               
chr2:12237034-12237512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
107-247
               

               
Cow position:
               
chr2:6233030-6232900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr2:77361297-77361112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 145
               

               
Conread position:
               
107-313
               

               
Cow position:
               
chr2:74964643-74964455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
107-334
               

               
Cow position:
               
chr2:1422547-1422316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 167
               

               
Conread position:
               
107-344
               

               
Cow position:
               
chr2:21410424-21410171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
107-376
               

               
Cow position:
               
chr2:45597173-45596912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
107-417
               

               
Cow position:
               
chr2:24635066-24634756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
217, 20
               

               
Conread position:
               
107-444
               

               
Cow position:
               
chr2:61181806-61181456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
107-474
               

               
Cow position:
               
chr2:46342955-46343313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
107-512
               

               
Cow position:
               
chr2:12332715-12332294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
194, 19
               

               
Conread position:
               
107-535
               

               
Cow position:
               
chr2:60462635-60463051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
107-535
               

               
Cow position:
               
chr2:60468014-60468430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr2:44065759-44065340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
107-575
               

               
Cow position:
               
chr2:6160155-6160614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
109-439
               

               
Cow position:
               
chr2:39334681-39335004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 178
               

               
Conread position:
               
110-254
               

               
Cow position:
               
chr2:60883983-60883847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
110-271
               

               
Cow position:
               
chr2:11435476-11435312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
110-282
               

               
Cow position:
               
chr2:37224262-37224085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
110-319
               

               
Cow position:
               
chr2:39095549-39095334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
110-322
               

               
Cow position:
               
chr2:31387171-31387379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
110-393
               

               
Cow position:
               
chr2:38640510-38640230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
110-412
               

               
Cow position:
               
chr2:33988115-33988422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 223
               

               
Conread position:
               
110-553
               

               
Cow position:
               
chr2:44170749-44170304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
110-553
               

               
Cow position:
               
chr2:46202459-46202016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
110-553
               

               
Cow position:
               
chr2:54883659-54883231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
110-554
               

               
Cow position:
               
chr2:31784120-31783689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
111-244
               

               
Cow position:
               
chr2:3728214-3728079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
111-277
               

               
Cow position:
               
chr2:47784791-47784625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
111-279
               

               
Cow position:
               
chr2:12873598-12873429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
111-287
               

               
Cow position:
               
chr2:19164778-19164957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 176
               

               
Conread position:
               
111-297
               

               
Cow position:
               
chr2:46125948-46126135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
111-321
               

               
Cow position:
               
chr2:49716895-49717112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
111-324
               

               
Cow position:
               
chr2:65059234-65059011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 202
               

               
Conread position:
               
111-332
               

               
Cow position:
               
chr2:65830147-65830374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
111-339
               

               
Cow position:
               
chr2:82116277-82116050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
111-342
               

               
Cow position:
               
chr2:1317691-1317927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
111-454
               

               
Cow position:
               
chr2:44022612-44022967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 219
               

               
Conread position:
               
111-470
               

               
Cow position:
               
chr2:47065303-47064950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 167
               

               
Conread position:
               
111-531
               

               
Cow position:
               
chr2:55278394-55278832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 226
               

               
Conread position:
               
111-553
               

               
Cow position:
               
chr2:39815105-39815538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
111-553
               

               
Cow position:
               
chr2:72528153-72527700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
111-558
               

               
Cow position:
               
chr2:68190456-68190893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
111-567
               

               
Cow position:
               
chr2:76313675-76314122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
112-263
               

               
Cow position:
               
chr2:72126920-72126772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
112-461
               

               
Cow position:
               
chr2:28257666-28257300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
112-474
               

               
Cow position:
               
chr2:14218844-14218477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 219
               

               
Conread position:
               
112-531
               

               
Cow position:
               
chr2:69250477-69250909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 160
               

               
Conread position:
               
112-542
               

               
Cow position:
               
chr2:15058872-15059309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
112-551
               

               
Cow position:
               
chr2:80241994-80242439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
113-255
               

               
Cow position:
               
chr2:31410553-31410409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
113-277
               

               
Cow position:
               
chr2:9416614-9416774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
113-322
               

               
Cow position:
               
chr2:49862845-49862629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr2:17492330-17492545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
113-442
               

               
Cow position:
               
chr2:24218028-24218357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
113-449
               

               
Cow position:
               
chr2:54968198-54967857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
113-532
               

               
Cow position:
               
chr2:80116286-80115871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
113-551
               

               
Cow position:
               
chr2:77467270-77467707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
272, 20
               

               
Conread position:
               
113-553
               

               
Cow position:
               
chr2:25283302-25282855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 213
               

               
Conread position:
               
113-556
               

               
Cow position:
               
chr2:52332445-52332885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 248
               

               
Conread position:
               
113-567
               

               
Cow position:
               
chr2:972007-971578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
113-568
               

               
Cow position:
               
chr2:45619208-45619663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
113-572
               

               
Cow position:
               
chr2:23270742-23271196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 195
               

               
Conread position:
               
114-248
               

               
Cow position:
               
chr2:1036199-1036340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
114-248
               

               
Cow position:
               
chr2:39409544-39409672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
114-268
               

               
Cow position:
               
chr2:83273487-83273644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
114-283
               

               
Cow position:
               
chr2:47160136-47159961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
114-285
               

               
Cow position:
               
chr2:16669658-16669480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
114-300
               

               
Cow position:
               
chr2:86540966-86541155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
114-321
               

               
Cow position:
               
chr2:46230135-46230348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
114-326
               

               
Cow position:
               
chr2:78360598-78360380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr2:35988430-35988656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
114-338
               

               
Cow position:
               
chr2:59819624-59819847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
114-369
               

               
Cow position:
               
chr2:39750304-39750039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
114-448
               

               
Cow position:
               
chr2:37973136-37973470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 181
               

               
Conread position:
               
114-485
               

               
Cow position:
               
chr2:32350741-32351109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 223
               

               
Conread position:
               
114-529
               

               
Cow position:
               
chr2:38795584-38795993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
114-542
               

               
Cow position:
               
chr2:64212365-64212803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 161
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr2:57939874-57939430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 211
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr2:65932156-65931718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 193
               

               
Conread position:
               
115-277
               

               
Cow position:
               
chr2:26574944-26574780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
115-295
               

               
Cow position:
               
chr2:9476249-9476434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
115-329
               

               
Cow position:
               
chr2:57565147-57565367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
115-337
               

               
Cow position:
               
chr2:10440015-10439797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
200, 20
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr2:67386284-67386583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 173
               

               
Conread position:
               
115-553
               

               
Cow position:
               
chr2:43835373-43835815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
115-566
               

               
Cow position:
               
chr2:77157160-77157618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr2:13328821-13328977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
116-287
               

               
Cow position:
               
chr2:56338850-56339021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
116-465
               

               
Cow position:
               
chr2:83410684-83410345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
116-553
               

               
Cow position:
               
chr2:35948495-35948918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 148
               

               
Conread position:
               
118-503
               

               
Cow position:
               
chr2:20791239-20791631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 185
               

               
Conread position:
               
118-551
               

               
Cow position:
               
chr2:21644266-21644703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
119-412
               

               
Cow position:
               
chr2:50353071-50352779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
119-474
               

               
Cow position:
               
chr2:1762973-1762619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
120-553
               

               
Cow position:
               
chr2:17940103-17940538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
123-553
               

               
Cow position:
               
chr2:36575914-36575481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
124-553
               

               
Cow position:
               
chr2:13582762-13582332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
125-474
               

               
Cow position:
               
chr2:72630630-72630257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
129-279
               

               
Cow position:
               
chr2:47189685-47189530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
129-568
               

               
Cow position:
               
chr2:85339286-85339728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 193
               

               
Conread position:
               
131-290
               

               
Cow position:
               
chr2:80235181-80235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
131-300
               

               
Cow position:
               
chr2:81493430-81493600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
131-316
               

               
Cow position:
               
chr2:46014939-46014747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
131-323
               

               
Cow position:
               
chr2:52466279-52466474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
131-532
               

               
Cow position:
               
chr2:45535635-45535237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 194
               

               
Conread position:
               
131-535
               

               
Cow position:
               
chr2:50566107-50565690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
131-552
               

               
Cow position:
               
chr2:69676358-69676786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
131-553
               

               
Cow position:
               
chr2:41185629-41185219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
132-289
               

               
Cow position:
               
chr2:13725475-13725630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
136-451
               

               
Cow position:
               
chr2:12988746-12988427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
136-532
               

               
Cow position:
               
chr2:53430883-53430493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
136-553
               

               
Cow position:
               
chr2:63273785-63274209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
234, 43
               

               
Conread position:
               
136-556
               

               
Cow position:
               
chr2:54971341-54970928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
50, 190
               

               
Conread position:
               
137-279
               

               
Cow position:
               
chr2:53575822-53575970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
137-550
               

               
Cow position:
               
chr2:44550691-44551083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 43
               

               
Conread position:
               
138-342
               

               
Cow position:
               
chr2:11631689-11631482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
138-465
               

               
Cow position:
               
chr2:31460173-31460495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
138-545
               

               
Cow position:
               
chr2:80903750-80904169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
138-551
               

               
Cow position:
               
chr2:37113034-37113448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
139-293
               

               
Cow position:
               
chr2:35208071-35207918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
139-496
               

               
Cow position:
               
chr2:43790262-43789908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 164
               

               
Conread position:
               
146-263
               

               
Cow position:
               
chr2:6771202-6771318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
146-448
               

               
Cow position:
               
chr2:68870847-68870548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
148-303
               

               
Cow position:
               
chr2:46169950-46170104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
150-296
               

               
Cow position:
               
chr2:23981733-23981584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
150-569
               

               
Cow position:
               
chr2:31500155-31499734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
155-296
               

               
Cow position:
               
chr2:15652973-15653111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
155-338
               

               
Cow position:
               
chr2:39513619-39513426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
155-539
               

               
Cow position:
               
chr2:40313505-40313132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
155-553
               

               
Cow position:
               
chr2:19286939-19287329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
155-553
               

               
Cow position:
               
chr2:39501182-39500780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 183
               

               
Conread position:
               
155-569
               

               
Cow position:
               
chr2:10655719-10656104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 17
               

               
Conread position:
               
155-569
               

               
Cow position:
               
chr2:23120625-23121024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
157-293
               

               
Cow position:
               
chr2:71163428-71163563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
157-553
               

               
Cow position:
               
chr2:39584589-39584199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
159-297
               

               
Cow position:
               
chr2:45537053-45537187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
159-532
               

               
Cow position:
               
chr2:46293912-46294270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
160-367
               

               
Cow position:
               
chr2:39544662-39544863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 166
               

               
Conread position:
               
160-382
               

               
Cow position:
               
chr2:60429416-60429201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
211, 19
               

               
Conread position:
               
160-417
               

               
Cow position:
               
chr2:24116973-24117230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
160-553
               

               
Cow position:
               
chr2:39663504-39663142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
296, 19
               

               
Conread position:
               
161-283
               

               
Cow position:
               
chr2:39242492-39242369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
161-533
               

               
Cow position:
               
chr2:2589820-2590180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 66
               

               
Conread position:
               
164-553
               

               
Cow position:
               
chr2:30642529-30642922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
164-553
               

               
Cow position:
               
chr2:44081571-44081197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
165-341
               

               
Cow position:
               
chr2:50368102-50367927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
165-539
               

               
Cow position:
               
chr2:80963518-80963885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 100
               

               
Conread position:
               
166-424
               

               
Cow position:
               
chr2:46971257-46970999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
166-441
               

               
Cow position:
               
chr2:54810724-54810995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
194, 80
               

               
Conread position:
               
166-553
               

               
Cow position:
               
chr2:41185192-41184814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 171
               

               
Conread position:
               
166-553
               

               
Cow position:
               
chr2:43596024-43596422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
167-302
               

               
Cow position:
               
chr2:67942221-67942087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
167-324
               

               
Cow position:
               
chr2:15229652-15229498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
167-328
               

               
Cow position:
               
chr2:12447465-12447629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
167-333
               

               
Cow position:
               
chr2:21671644-21671482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
167-333
               

               
Cow position:
               
chr2:44216563-44216398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
167-336
               

               
Cow position:
               
chr2:8821363-8821193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
167-339
               

               
Cow position:
               
chr2:27187657-27187487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
167-408
               

               
Cow position:
               
chr2:44222955-44222717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
167-408
               

               
Cow position:
               
chr2:72309884-72310104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
218, 22
               

               
Conread position:
               
167-412
               

               
Cow position:
               
chr2:14626720-14626473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 12
               

               
Conread position:
               
167-438
               

               
Cow position:
               
chr2:6901907-6901640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
167-458
               

               
Cow position:
               
chr2:44025508-44025222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
167-465
               

               
Cow position:
               
chr2:24434149-24434441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
167-465
               

               
Cow position:
               
chr2:70781222-70780931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
167-468
               

               
Cow position:
               
chr2:84970586-84970875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
167-495
               

               
Cow position:
               
chr2:61421037-61421369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr2:44191610-44191273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
167-529
               

               
Cow position:
               
chr2:67609638-67610013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
167-532
               

               
Cow position:
               
chr2:72183362-72183723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 149
               

               
Conread position:
               
167-534
               

               
Cow position:
               
chr2:26805988-26806349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
167-547
               

               
Cow position:
               
chr2:81927976-81927608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 14
               

               
Conread position:
               
167-552
               

               
Cow position:
               
chr2:40402896-40403272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 104
               

               
Conread position:
               
167-552
               

               
Cow position:
               
chr2:85496204-85496564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr2:41955016-41954627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr2:47008213-47008598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr2:67480106-67479730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
167-567
               

               
Cow position:
               
chr2:35136088-35135706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
167-575
               

               
Cow position:
               
chr2:79404221-79403832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
168-263
               

               
Cow position:
               
chr2:52656698-52656604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
168-376
               

               
Cow position:
               
chr2:13645446-13645252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
168-391
               

               
Cow position:
               
chr2:30911451-30911233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
168-497
               

               
Cow position:
               
chr2:7383559-7383879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
168-513
               

               
Cow position:
               
chr2:69823721-69823373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
168-532
               

               
Cow position:
               
chr2:7524002-7524374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
168-539
               

               
Cow position:
               
chr2:36017284-36017654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
168-552
               

               
Cow position:
               
chr2:64533460-64533090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
244, 27
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr2:14854434-14854071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
207, 97
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr2:45439562-45439203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
168-575
               

               
Cow position:
               
chr2:32402840-32403237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 95
               

               
Conread position:
               
169-282
               

               
Cow position:
               
chr2:63894606-63894720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
169-297
               

               
Cow position:
               
chr2:11217920-11217792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
169-297
               

               
Cow position:
               
chr2:40058610-40058739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
170-297
               

               
Cow position:
               
chr2:39418961-39419090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
170-553
               

               
Cow position:
               
chr2:6056098-6055715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
170-553
               

               
Cow position:
               
chr2:46909310-46909695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
170-571
               

               
Cow position:
               
chr2:16514904-16514522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
205, 72
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr2:63718292-63718490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
171-430
               

               
Cow position:
               
chr2:42293377-42293121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
171-446
               

               
Cow position:
               
chr2:44005082-44004811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
171-543
               

               
Cow position:
               
chr2:62644719-62644357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
13, 153
               

               
Conread position:
               
172-284
               

               
Cow position:
               
chr2:46190356-46190243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr2:64773510-64773361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
172-370
               

               
Cow position:
               
chr2:19062294-19062111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
172-436
               

               
Cow position:
               
chr2:39598087-39597827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
172-439
               

               
Cow position:
               
chr2:34918257-34917983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
172-515
               

               
Cow position:
               
chr2:47624281-47624614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
172-532
               

               
Cow position:
               
chr2:53851562-53851199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
172-553
               

               
Cow position:
               
chr2:36055675-36056049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
209, 17
               

               
Conread position:
               
172-553
               

               
Cow position:
               
chr2:81388816-81388438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
172-554
               

               
Cow position:
               
chr2:47073311-47072938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 7
               

               
Conread position:
               
173-399
               

               
Cow position:
               
chr2:48130744-48130525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
202, 41
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr2:77282143-77281910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
198, 31
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr2:40803124-40802891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
173-433
               

               
Cow position:
               
chr2:72407376-72407624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
204, 6
               

               
Conread position:
               
173-495
               

               
Cow position:
               
chr2:5130331-5130645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
173-551
               

               
Cow position:
               
chr2:77242000-77241605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
173-553
               

               
Cow position:
               
chr2:47645171-47644801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
173-568
               

               
Cow position:
               
chr2:39263610-39263224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 6
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr2:42927326-42927724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr2:69747493-69747891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
197, 6
               

               
Conread position:
               
174-263
               

               
Cow position:
               
chr2:2100649-2100737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
174-324
               

               
Cow position:
               
chr2:65890504-65890649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr2:33659579-33659954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
211, 152
               

               
Conread position:
               
174-569
               

               
Cow position:
               
chr2:61485746-61485369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 125
               

               
Conread position:
               
175-338
               

               
Cow position:
               
chr2:40466758-40466594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
175-501
               

               
Cow position:
               
chr2:45912509-45912833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
175-553
               

               
Cow position:
               
chr2:47097830-47098186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
176-515
               

               
Cow position:
               
chr2:46374821-46375146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
176-554
               

               
Cow position:
               
chr2:45784861-45784483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
8, 348
               

               
Conread position:
               
177-417
               

               
Cow position:
               
chr2:14734224-14734002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
208, 22
               

               
Conread position:
               
177-553
               

               
Cow position:
               
chr2:46243904-46244278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
210, 59
               

               
Conread position:
               
177-564
               

               
Cow position:
               
chr2:36436326-36435938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 28
               

               
Conread position:
               
178-447
               

               
Cow position:
               
chr2:20362536-20362791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
210, 84
               

               
Conread position:
               
178-493
               

               
Cow position:
               
chr2:54789893-54789575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
200, 114
               

               
Conread position:
               
178-553
               

               
Cow position:
               
chr2:46230644-46231020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
182, 112
               

               
Conread position:
               
179-453
               

               
Cow position:
               
chr2:58035225-58034974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
179-572
               

               
Cow position:
               
chr2:4383779-4384161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 143
               

               
Conread position:
               
180-411
               

               
Cow position:
               
chr2:62861704-62861481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
180-417
               

               
Cow position:
               
chr2:55062994-55062772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
191, 66
               

               
Conread position:
               
180-518
               

               
Cow position:
               
chr2:23847718-23848040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 62
               

               
Conread position:
               
181-490
               

               
Cow position:
               
chr2:549214-549517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
195, 81
               

               
Conread position:
               
181-543
               

               
Cow position:
               
chr2:39564469-39564111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr2:11697241-11696878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 30
               

               
Conread position:
               
181-571
               

               
Cow position:
               
chr2:18061512-18061901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
189, 126
               

               
Conread position:
               
182-300
               

               
Cow position:
               
chr2:56796954-56797071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chr2:64131534-64131313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
182-412
               

               
Cow position:
               
chr2:13935822-13935600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
202, 66
               

               
Conread position:
               
182-454
               

               
Cow position:
               
chr2:24106510-24106241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
182-499
               

               
Cow position:
               
chr2:1638718-1638398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
188, 74
               

               
Conread position:
               
182-530
               

               
Cow position:
               
chr2:41461484-41461132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 137
               

               
Conread position:
               
182-544
               

               
Cow position:
               
chr2:31457607-31457243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
182-551
               

               
Cow position:
               
chr2:21211655-21211289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
182-551
               

               
Cow position:
               
chr2:42925405-42925054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
182-552
               

               
Cow position:
               
chr2:41314008-41313638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
188, 50
               

               
Conread position:
               
182-552
               

               
Cow position:
               
chr2:73353907-73353537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 83
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr2:17444912-17444542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr2:32446226-32446562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
195, 134
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr2:32453417-32453760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr2:50580477-50580117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 22
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr2:50606652-50606297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr2:70579589-70579965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
187, 50
               

               
Conread position:
               
182-569
               

               
Cow position:
               
chr2:11734638-11734245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
182-572
               

               
Cow position:
               
chr2:40427683-40428073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
182-575
               

               
Cow position:
               
chr2:53000622-53000237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
182-575
               

               
Cow position:
               
chr2:72758740-72758350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
188, 83
               

               
Conread position:
               
183-292
               

               
Cow position:
               
chr2:46346717-46346826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-293
               

               
Cow position:
               
chr2:40431687-40431797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-405
               

               
Cow position:
               
chr2:13271305-13271522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 107
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr2:73789877-73790099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 141
               

               
Conread position:
               
183-413
               

               
Cow position:
               
chr2:43123453-43123228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
189, 116
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr2:46247347-46247633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
186, 116
               

               
Conread position:
               
183-489
               

               
Cow position:
               
chr2:70495382-70495081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
188, 45
               

               
Conread position:
               
183-546
               

               
Cow position:
               
chr2:82262261-82262624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
183-552
               

               
Cow position:
               
chr2:41710967-41710630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
231, 80
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr2:32416746-32417109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 140
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr2:36866670-36867017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr2:68487892-68488261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
194, 116
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr2:74260570-74260207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
183-569
               

               
Cow position:
               
chr2:68109627-68110010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 195
               

               
Conread position:
               
183-570
               

               
Cow position:
               
chr2:42309441-42309823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
183-571
               

               
Cow position:
               
chr2:18637002-18636624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
187, 47
               

               
Conread position:
               
183-572
               

               
Cow position:
               
chr2:26102881-26102510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 135
               

               
Conread position:
               
183-573
               

               
Cow position:
               
chr2:425928-425550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 49
               

               
Conread position:
               
184-283
               

               
Cow position:
               
chr2:19031026-19031125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-314
               

               
Cow position:
               
chr2:60368429-60368299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-370
               

               
Cow position:
               
chr2:79138362-79138181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
184-418
               

               
Cow position:
               
chr2:12051262-12051037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
191, 23
               

               
Conread position:
               
184-496
               

               
Cow position:
               
chr2:17341998-17341704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
229, 81
               

               
Conread position:
               
184-531
               

               
Cow position:
               
chr2:6697391-6697725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
194, 36
               

               
Conread position:
               
184-556
               

               
Cow position:
               
chr2:70896148-70895774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
184-567
               

               
Cow position:
               
chr2:74209226-74209588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
288, 11
               

               
Conread position:
               
184-574
               

               
Cow position:
               
chr2:38205645-38206036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 139
               

               
Conread position:
               
185-512
               

               
Cow position:
               
chr2:44232341-44232668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 73
               

               
Conread position:
               
186-339
               

               
Cow position:
               
chr2:34474185-34474336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
186-553
               

               
Cow position:
               
chr2:59952748-59953108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
186-553
               

               
Cow position:
               
chr2:62226289-62225930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
186-575
               

               
Cow position:
               
chr2:30817079-30816684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
187-576
               

               
Cow position:
               
chr2:48361682-48361295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
191, 124
               

               
Conread position:
               
189-451
               

               
Cow position:
               
chr2:69367017-69367282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
191-317
               

               
Cow position:
               
chr2:79215554-79215677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
191-331
               

               
Cow position:
               
chr2:78197974-78197834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-408
               

               
Cow position:
               
chr2:22113591-22113807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
191-417
               

               
Cow position:
               
chr2:46190872-46191089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
194, 131
               

               
Conread position:
               
191-553
               

               
Cow position:
               
chr2:45880675-45881019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
186, 18
               

               
Conread position:
               
191-553
               

               
Cow position:
               
chr2:50278128-50277770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 39
               

               
Conread position:
               
191-553
               

               
Cow position:
               
chr2:53532706-53533059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
191-562
               

               
Cow position:
               
chr2:46194887-46194535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 51
               

               
Conread position:
               
192-552
               

               
Cow position:
               
chr2:14749696-14749344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
193-550
               

               
Cow position:
               
chr2:45666136-45665784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 12
               

               
Conread position:
               
193-553
               

               
Cow position:
               
chr2:23014353-23014732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
195-319
               

               
Cow position:
               
chr2:55831551-55831674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
195-546
               

               
Cow position:
               
chr2:39489876-39489536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
215, 89
               

               
Conread position:
               
196-465
               

               
Cow position:
               
chr2:2740560-2740300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
180, 13
               

               
Conread position:
               
196-465
               

               
Cow position:
               
chr2:26170845-26170578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
174, 10
               

               
Conread position:
               
196-500
               

               
Cow position:
               
chr2:66649729-66649420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 71
               

               
Conread position:
               
196-553
               

               
Cow position:
               
chr2:70539272-70539628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
176, 10
               

               
Conread position:
               
196-554
               

               
Cow position:
               
chr2:70945505-70945145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 125
               

               
Conread position:
               
197-539
               

               
Cow position:
               
chr2:48863891-48864221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
198-513
               

               
Cow position:
               
chr2:24720386-24720083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
198-572
               

               
Cow position:
               
chr2:28653436-28653802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
199-425
               

               
Cow position:
               
chr2:26880180-26879961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
172, 75
               

               
Conread position:
               
199-483
               

               
Cow position:
               
chr2:65749753-65749481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
199-553
               

               
Cow position:
               
chr2:31909929-31910276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
199-553
               

               
Cow position:
               
chr2:39078475-39078122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
200-543
               

               
Cow position:
               
chr2:42936112-42936458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
171, 123
               

               
Conread position:
               
202-465
               

               
Cow position:
               
chr2:5999042-5998782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
170, 117
               

               
Conread position:
               
203-551
               

               
Cow position:
               
chr2:6539143-6539487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
204-497
               

               
Cow position:
               
chr2:9325092-9324795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 118
               

               
Conread position:
               
204-517
               

               
Cow position:
               
chr2:47808827-47808511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
204-553
               

               
Cow position:
               
chr2:52344844-52344510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
174, 95
               

               
Conread position:
               
204-575
               

               
Cow position:
               
chr2:16123011-16123362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
204-575
               

               
Cow position:
               
chr2:42226169-42226540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
205-553
               

               
Cow position:
               
chr2:988779-988439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
206-532
               

               
Cow position:
               
chr2:29269163-29268828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 119
               

               
Conread position:
               
208-568
               

               
Cow position:
               
chr2:4796840-4796499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
152, 24
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr2:46406422-46406191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
209-553
               

               
Cow position:
               
chr2:39855878-39855537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
209-553
               

               
Cow position:
               
chr2:43773494-43773827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
210-575
               

               
Cow position:
               
chr2:62818619-62818989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
211-376
               

               
Cow position:
               
chr2:39223743-39223581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr2:3308941-3309230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 70
               

               
Conread position:
               
212-502
               

               
Cow position:
               
chr2:2382473-2382766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
212-547
               

               
Cow position:
               
chr2:10356590-10356921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
164, 7
               

               
Conread position:
               
212-567
               

               
Cow position:
               
chr2:21416382-21416047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
217-553
               

               
Cow position:
               
chr2:54890399-54890069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
218-497
               

               
Cow position:
               
chr2:4655019-4655298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
160, 41
               

               
Conread position:
               
219-553
               

               
Cow position:
               
chr2:305771-306098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
220-553
               

               
Cow position:
               
chr2:72598880-72598552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
221-529
               

               
Cow position:
               
chr2:49608668-49608357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
152, 103
               

               
Conread position:
               
221-566
               

               
Cow position:
               
chr2:10867816-10868157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
230-556
               

               
Cow position:
               
chr2:45258994-45259331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 238
               

               
Conread position:
               
232-574
               

               
Cow position:
               
chr2:4273200-4273538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
233-502
               

               
Cow position:
               
chr2:82019062-82019326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
234-553
               

               
Cow position:
               
chr2:36878155-36878470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
236-535
               

               
Cow position:
               
chr2:34535096-34535394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
139, 83
               

               
Conread position:
               
236-554
               

               
Cow position:
               
chr2:75561900-75561584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
237-551
               

               
Cow position:
               
chr2:39662765-39662449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
239-553
               

               
Cow position:
               
chr2:59905984-59906280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
242-553
               

               
Cow position:
               
chr2:50445957-50445642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
242-554
               

               
Cow position:
               
chr2:11617150-11616846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
243-553
               

               
Cow position:
               
chr2:29882685-29882989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
169, 84
               

               
Conread position:
               
244-474
               

               
Cow position:
               
chr2:46175207-46175429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
171, 67
               

               
Conread position:
               
245-555
               

               
Cow position:
               
chr2:4223216-4223519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
246-567
               

               
Cow position:
               
chr2:69238330-69238006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
247-495
               

               
Cow position:
               
chr2:80595259-80595509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
247-553
               

               
Cow position:
               
chr2:23493585-23493282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
255-531
               

               
Cow position:
               
chr2:14806299-14806569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
256-552
               

               
Cow position:
               
chr2:28118542-28118250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 67
               

               
Conread position:
               
260-465
               

               
Cow position:
               
chr2:78220136-78219932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
260-553
               

               
Cow position:
               
chr2:6313816-6314106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
262-553
               

               
Cow position:
               
chr2:55387578-55387297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 59
               

               
Conread position:
               
263-574
               

               
Cow position:
               
chr2:63865291-63865606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
265-517
               

               
Cow position:
               
chr2:55960579-55960826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr2:22125250-22125549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr2:80839098-80839382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
267-572
               

               
Cow position:
               
chr2:45470037-45469734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
268-514
               

               
Cow position:
               
chr2:47119667-47119410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
268-553
               

               
Cow position:
               
chr2:51824963-51824676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
268-573
               

               
Cow position:
               
chr2:7966129-7965849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
286, 53
               

               
Conread position:
               
269-551
               

               
Cow position:
               
chr2:1203713-1203430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
276-531
               

               
Cow position:
               
chr2:68716647-68716901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 62
               

               
Conread position:
               
276-553
               

               
Cow position:
               
chr2:24469636-24469909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
277-493
               

               
Cow position:
               
chr2:46353466-46353688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
277-536
               

               
Cow position:
               
chr2:1435363-1435102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
278-537
               

               
Cow position:
               
chr2:56102435-56102708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
280-538
               

               
Cow position:
               
chr2:69770522-69770265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
280-553
               

               
Cow position:
               
chr2:71163688-71163964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
283-571
               

               
Cow position:
               
chr2:71495409-71495117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
284-572
               

               
Cow position:
               
chr2:66614885-66615190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
286-553
               

               
Cow position:
               
chr2:46994731-46995004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
289-495
               

               
Cow position:
               
chr2:59915237-59915026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
289-572
               

               
Cow position:
               
chr2:42599947-42599657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
293-489
               

               
Cow position:
               
chr2:76122448-76122654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
300-577
               

               
Cow position:
               
chr2:42938292-42938577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
302-518
               

               
Cow position:
               
chr2:17341581-17341354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
303-532
               

               
Cow position:
               
chr2:27613014-27613259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
304-546
               

               
Cow position:
               
chr2:21355848-21356098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
304-553
               

               
Cow position:
               
chr2:13467700-13467447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
304-553
               

               
Cow position:
               
chr2:21407924-21407668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
304-575
               

               
Cow position:
               
chr2:45311116-45311400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 245
               

               
Conread position:
               
304-575
               

               
Cow position:
               
chr2:55480237-55480511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
305-575
               

               
Cow position:
               
chr2:62685640-62685363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 29
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr2:47784363-47784122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
308-547
               

               
Cow position:
               
chr2:25964489-25964731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
308-575
               

               
Cow position:
               
chr2:46245436-46245711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
311-553
               

               
Cow position:
               
chr2:65603935-65604179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
312-551
               

               
Cow position:
               
chr2:13725917-13726145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
314-573
               

               
Cow position:
               
chr2:35359786-35359532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
316-553
               

               
Cow position:
               
chr2:39376338-39376100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
316-553
               

               
Cow position:
               
chr2:74030987-74031240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 235
               

               
Conread position:
               
317-552
               

               
Cow position:
               
chr2:84997313-84997064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 232
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr2:841154-840907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr2:13341990-13342232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
319-510
               

               
Cow position:
               
chr2:39362676-39362873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
321-553
               

               
Cow position:
               
chr2:15815572-15815338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
322-574
               

               
Cow position:
               
chr2:22035633-22035373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 152
               

               
Conread position:
               
324-553
               

               
Cow position:
               
chr2:4254550-4254788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
325-553
               

               
Cow position:
               
chr2:27145388-27145616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
325-553
               

               
Cow position:
               
chr2:85091053-85091291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
325-564
               

               
Cow position:
               
chr2:2148-2379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
325-575
               

               
Cow position:
               
chr2:41525739-41525992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
326-551
               

               
Cow position:
               
chr2:46362812-46362573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 223
               

               
Conread position:
               
327-539
               

               
Cow position:
               
chr2:31529483-31529271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
327-553
               

               
Cow position:
               
chr2:1352132-1352363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
327-554
               

               
Cow position:
               
chr2:8505799-8505564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
327-568
               

               
Cow position:
               
chr2:62978692-62978931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
328-553
               

               
Cow position:
               
chr2:818565-818333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 214
               

               
Conread position:
               
328-553
               

               
Cow position:
               
chr2:21183141-21182907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
328-553
               

               
Cow position:
               
chr2:85930438-85930205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 211
               

               
Conread position:
               
328-572
               

               
Cow position:
               
chr2:73069704-73069447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
329-462
               

               
Cow position:
               
chr2:45537455-45537597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
329-504
               

               
Cow position:
               
chr2:82647841-82648025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
329-524
               

               
Cow position:
               
chr2:32408513-32408708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
329-527
               

               
Cow position:
               
chr2:36007606-36007810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
329-547
               

               
Cow position:
               
chr2:46020885-46020657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr2:469627-469408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
329-551
               

               
Cow position:
               
chr2:9591912-9591679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 217
               

               
Conread position:
               
329-551
               

               
Cow position:
               
chr2:61974780-61974544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 220
               

               
Conread position:
               
329-552
               

               
Cow position:
               
chr2:58247895-58248116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr2:13544004-13543776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr2:15653333-15653562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr2:40691467-40691236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr2:57393312-57393547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr2:73466543-73466766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
329-566
               

               
Cow position:
               
chr2:21284913-21284673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
329-571
               

               
Cow position:
               
chr2:1364910-1365161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
329-574
               

               
Cow position:
               
chr2:31125760-31125511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
329-575
               

               
Cow position:
               
chr2:45554294-45554047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr2:42643118-42643345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr2:36144996-36144771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr2:40836188-40836415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr2:47877952-47877727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr2:51644995-51644771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
330-570
               

               
Cow position:
               
chr2:56771804-56771573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
330-573
               

               
Cow position:
               
chr2:47138817-47138564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
330-574
               

               
Cow position:
               
chr2:59960057-59960299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 43
               

               
Conread position:
               
331-542
               

               
Cow position:
               
chr2:50400402-50400178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 203
               

               
Conread position:
               
331-575
               

               
Cow position:
               
chr2:11900405-11900157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
332-544
               

               
Cow position:
               
chr2:50777745-50777532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
332-557
               

               
Cow position:
               
chr2:36998135-36997900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 213
               

               
Conread position:
               
333-515
               

               
Cow position:
               
chr2:28318879-28319068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
333-551
               

               
Cow position:
               
chr2:61187153-61187374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
333-553
               

               
Cow position:
               
chr2:25283788-25283558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
333-553
               

               
Cow position:
               
chr2:25285532-25285302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
333-553
               

               
Cow position:
               
chr2:46170899-46171126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
333-553
               

               
Cow position:
               
chr2:80797645-80797423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
333-570
               

               
Cow position:
               
chr2:26555612-26555855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
333-576
               

               
Cow position:
               
chr2:40882052-40881811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 119
               

               
Conread position:
               
334-532
               

               
Cow position:
               
chr2:41897434-41897227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
334-550
               

               
Cow position:
               
chr2:20940413-20940190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 208
               

               
Conread position:
               
334-574
               

               
Cow position:
               
chr2:27076687-27076444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
334-574
               

               
Cow position:
               
chr2:85246354-85246606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
44, 219
               

               
Conread position:
               
334-575
               

               
Cow position:
               
chr2:76822274-76822528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
335-552
               

               
Cow position:
               
chr2:48617955-48617727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 211
               

               
Conread position:
               
335-574
               

               
Cow position:
               
chr2:29546023-29546271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
336-550
               

               
Cow position:
               
chr2:27600570-27600794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 209
               

               
Conread position:
               
336-552
               

               
Cow position:
               
chr2:21171354-21171147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
337-539
               

               
Cow position:
               
chr2:333122-333317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
337-539
               

               
Cow position:
               
chr2:22969112-22968909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
337-552
               

               
Cow position:
               
chr2:40492337-40492118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 202
               

               
Conread position:
               
337-574
               

               
Cow position:
               
chr2:64830818-64830583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
338-514
               

               
Cow position:
               
chr2:49344682-49344499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
338-547
               

               
Cow position:
               
chr2:42872241-42872021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 208
               

               
Conread position:
               
339-494
               

               
Cow position:
               
chr2:17493347-17493518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
339-553
               

               
Cow position:
               
chr2:5297716-5297487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 211
               

               
Conread position:
               
342-549
               

               
Cow position:
               
chr2:14396276-14396487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
343-532
               

               
Cow position:
               
chr2:11599401-11599207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
343-553
               

               
Cow position:
               
chr2:28637322-28637534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
345-552
               

               
Cow position:
               
chr2:15571567-15571779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
42, 195
               

               
Conread position:
               
345-553
               

               
Cow position:
               
chr2:68660753-68660535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
345-570
               

               
Cow position:
               
chr2:70746761-70746527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
347-553
               

               
Cow position:
               
chr2:32406642-32406434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr2:73282597-73282808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr2:15812611-15812401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr2:73985060-73985273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 195
               

               
Conread position:
               
353-572
               

               
Cow position:
               
chr2:46734412-46734184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr2:60956325-60956140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
354-553
               

               
Cow position:
               
chr2:68084468-68084262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 188
               

               
Conread position:
               
356-532
               

               
Cow position:
               
chr2:24722494-24722675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
357-513
               

               
Cow position:
               
chr2:26157760-26157927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
361-553
               

               
Cow position:
               
chr2:28285582-28285782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
362-553
               

               
Cow position:
               
chr2:37072760-37072560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 182
               

               
Conread position:
               
362-575
               

               
Cow position:
               
chr2:6063073-6063291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr2:70775631-70775818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr2:14884214-14884033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr2:44032610-44032782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr2:53575034-53574856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
374-554
               

               
Cow position:
               
chr2:20855897-20856076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
376-553
               

               
Cow position:
               
chr2:4922196-4922373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
376-554
               

               
Cow position:
               
chr2:16387610-16387432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
384-553
               

               
Cow position:
               
chr2:80177842-80178015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 155
               

               
Conread position:
               
385-566
               

               
Cow position:
               
chr2:34643349-34643169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
387-573
               

               
Cow position:
               
chr2:45231110-45230928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
397-564
               

               
Cow position:
               
chr2:36468269-36468096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
402-532
               

               
Cow position:
               
chr2:77968953-77969084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
402-573
               

               
Cow position:
               
chr2:66097784-66097960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
406-550
               

               
Cow position:
               
chr2:10295995-10295853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
406-553
               

               
Cow position:
               
chr2:21698893-21698742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 133
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr2:43123208-43123066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
413-553
               

               
Cow position:
               
chr2:78750425-78750285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
413-571
               

               
Cow position:
               
chr2:29291654-29291811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
413-575
               

               
Cow position:
               
chr2:58310582-58310420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 122
               

               
Conread position:
               
415-554
               

               
Cow position:
               
chr2:29734393-29734249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
420-553
               

               
Cow position:
               
chr2:26318511-26318379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 114
               
Show alignments to all cow chromosomes.