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Cow genome map

           
Conread name:
           
Pig2-110D05
        

               
Conread position:
               
7-489
               

               
Cow position:
               
chr21:47401-46911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
37-280
               

               
Cow position:
               
chr21:27744359-27744105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
54-553
               

               
Cow position:
               
chr21:20160991-20160495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 278
               

               
Conread position:
               
60-335
               

               
Cow position:
               
chr21:33580713-33580445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
65-550
               

               
Cow position:
               
chr21:33727181-33727647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
66-289
               

               
Cow position:
               
chr21:12322795-12322568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
67-326
               

               
Cow position:
               
chr21:13164156-13163893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
68-569
               

               
Cow position:
               
chr21:27863222-27863723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr21:40475795-40475529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
71-261
               

               
Cow position:
               
chr21:3379461-3379653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
73-497
               

               
Cow position:
               
chr21:41590274-41590692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
61, 249
               

               
Conread position:
               
73-551
               

               
Cow position:
               
chr21:22856516-22856029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 216
               

               
Conread position:
               
75-474
               

               
Cow position:
               
chr21:9477455-9477051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
76-321
               

               
Cow position:
               
chr21:40291462-40291707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
77-287
               

               
Cow position:
               
chr21:6292040-6291819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr21:23673033-23672557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
78-459
               

               
Cow position:
               
chr21:22121789-22121426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
78-553
               

               
Cow position:
               
chr21:25764900-25764446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
78-575
               

               
Cow position:
               
chr21:13584767-13585268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
79-224
               

               
Cow position:
               
chr21:908162-908307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
79-273
               

               
Cow position:
               
chr21:3135582-3135782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
79-470
               

               
Cow position:
               
chr21:30217932-30218292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
79-553
               

               
Cow position:
               
chr21:6834334-6833863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
79-573
               

               
Cow position:
               
chr21:19083299-19083808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
80-295
               

               
Cow position:
               
chr21:27711950-27712178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr21:19195874-19196357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 229
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr21:20262064-20262523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
163, 26
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr21:24222234-24222727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
80-553
               

               
Cow position:
               
chr21:44565444-44565891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
80-575
               

               
Cow position:
               
chr21:42501337-42500822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 259
               

               
Conread position:
               
81-230
               

               
Cow position:
               
chr21:23348317-23348460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
81-399
               

               
Cow position:
               
chr21:38720534-38720224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
81-449
               

               
Cow position:
               
chr21:9036585-9036209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
81-480
               

               
Cow position:
               
chr21:19407288-19407703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
81-553
               

               
Cow position:
               
chr21:9416528-9416053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
82-297
               

               
Cow position:
               
chr21:15012714-15012502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
82-301
               

               
Cow position:
               
chr21:5218987-5218760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
82-343
               

               
Cow position:
               
chr21:18135605-18135854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
82-363
               

               
Cow position:
               
chr21:39319126-39319406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
82-369
               

               
Cow position:
               
chr21:27677763-27677467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
82-411
               

               
Cow position:
               
chr21:13656351-13656674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
82-428
               

               
Cow position:
               
chr21:15543957-15544283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 16
               

               
Conread position:
               
82-497
               

               
Cow position:
               
chr21:938303-937903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
83-289
               

               
Cow position:
               
chr21:5214638-5214419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
83-547
               

               
Cow position:
               
chr21:39664117-39664572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
83-552
               

               
Cow position:
               
chr21:40589198-40589671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 245
               

               
Conread position:
               
84-304
               

               
Cow position:
               
chr21:28882463-28882236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr21:30145353-30145576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
84-411
               

               
Cow position:
               
chr21:41140436-41140762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
84-476
               

               
Cow position:
               
chr21:11675788-11676157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr21:20318792-20318548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr21:9905583-9905782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
86-546
               

               
Cow position:
               
chr21:44825596-44826061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
86-552
               

               
Cow position:
               
chr21:34010117-34010578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
86-575
               

               
Cow position:
               
chr21:14452512-14452019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
87-293
               

               
Cow position:
               
chr21:11182826-11182620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
87-297
               

               
Cow position:
               
chr21:20174589-20174381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
87-311
               

               
Cow position:
               
chr21:40059305-40059077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
87-455
               

               
Cow position:
               
chr21:6998218-6997846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
87-470
               

               
Cow position:
               
chr21:17559636-17560037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 212
               

               
Conread position:
               
87-503
               

               
Cow position:
               
chr21:957946-957526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
87-551
               

               
Cow position:
               
chr21:33996974-33997409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr21:12154403-12153944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
87-556
               

               
Cow position:
               
chr21:34654348-34653892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 201
               

               
Conread position:
               
88-240
               

               
Cow position:
               
chr21:38867101-38867247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
88-260
               

               
Cow position:
               
chr21:46463846-46463679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
88-399
               

               
Cow position:
               
chr21:46132869-46132551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
45, 233
               

               
Conread position:
               
88-474
               

               
Cow position:
               
chr21:30222620-30222234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 246
               

               
Conread position:
               
89-230
               

               
Cow position:
               
chr21:10727786-10727639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-239
               

               
Cow position:
               
chr21:30359074-30359224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
89-260
               

               
Cow position:
               
chr21:18495491-18495321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr21:44732767-44732956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 176
               

               
Conread position:
               
89-283
               

               
Cow position:
               
chr21:24757212-24757018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
89-289
               

               
Cow position:
               
chr21:4109050-4108846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
89-291
               

               
Cow position:
               
chr21:30976992-30977187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 128
               

               
Conread position:
               
89-294
               

               
Cow position:
               
chr21:6945633-6945442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
89-297
               

               
Cow position:
               
chr21:25012351-25012145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
89-298
               

               
Cow position:
               
chr21:38482658-38482445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 184
               

               
Conread position:
               
89-461
               

               
Cow position:
               
chr21:8207033-8206674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
89-463
               

               
Cow position:
               
chr21:1511560-1511192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
89-471
               

               
Cow position:
               
chr21:23979901-23980290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 241
               

               
Conread position:
               
89-495
               

               
Cow position:
               
chr21:6713248-6713656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 212
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr21:3254409-3253977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr21:38901039-38900584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
89-566
               

               
Cow position:
               
chr21:45356091-45355635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
90-237
               

               
Cow position:
               
chr21:48242775-48242933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
90-250
               

               
Cow position:
               
chr21:45376224-45376058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
90-283
               

               
Cow position:
               
chr21:11353339-11353137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr21:12298862-12298656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
90-338
               

               
Cow position:
               
chr21:42145094-42144849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
90-341
               

               
Cow position:
               
chr21:36682601-36682344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
90-342
               

               
Cow position:
               
chr21:71861-71606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
90-439
               

               
Cow position:
               
chr21:16570168-16569825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
90-489
               

               
Cow position:
               
chr21:44214386-44213996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
91-247
               

               
Cow position:
               
chr21:17857036-17856878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
91-248
               

               
Cow position:
               
chr21:45537464-45537296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
91-263
               

               
Cow position:
               
chr21:2787516-2787701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
91-263
               

               
Cow position:
               
chr21:5489024-5488847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 137
               

               
Conread position:
               
91-318
               

               
Cow position:
               
chr21:745444-745219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
91-332
               

               
Cow position:
               
chr21:31279528-31279284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
91-444
               

               
Cow position:
               
chr21:16152713-16152350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
91-497
               

               
Cow position:
               
chr21:29978491-29978898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 89
               

               
Conread position:
               
91-498
               

               
Cow position:
               
chr21:12461695-12462107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 248
               

               
Conread position:
               
91-515
               

               
Cow position:
               
chr21:28244743-28244322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
91-551
               

               
Cow position:
               
chr21:37706138-37706594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 243
               

               
Conread position:
               
91-553
               

               
Cow position:
               
chr21:22861266-22860813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
92-248
               

               
Cow position:
               
chr21:29011703-29011861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
41, 106
               

               
Conread position:
               
92-281
               

               
Cow position:
               
chr21:30970208-30970014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr21:15869957-15869761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
92-338
               

               
Cow position:
               
chr21:9278801-9278546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 215
               

               
Conread position:
               
92-547
               

               
Cow position:
               
chr21:39403254-39403724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
10, 231
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr21:42841312-42841780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
41, 255
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr21:47761042-47760588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
92-567
               

               
Cow position:
               
chr21:33982541-33983014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
92-570
               

               
Cow position:
               
chr21:28733640-28734117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
93-273
               

               
Cow position:
               
chr21:27568168-27567981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
93-287
               

               
Cow position:
               
chr21:8506275-8506473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-287
               

               
Cow position:
               
chr21:8509163-8509361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-297
               

               
Cow position:
               
chr21:6851437-6851235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
93-338
               

               
Cow position:
               
chr21:742546-742308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
93-368
               

               
Cow position:
               
chr21:8430826-8431099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
93-380
               

               
Cow position:
               
chr21:36508502-36508233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
93-404
               

               
Cow position:
               
chr21:8545747-8546051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
21, 191
               

               
Conread position:
               
93-433
               

               
Cow position:
               
chr21:40266396-40266051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
93-456
               

               
Cow position:
               
chr21:9939938-9940287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
93-490
               

               
Cow position:
               
chr21:12301258-12301632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
93-532
               

               
Cow position:
               
chr21:22193824-22194281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
93-534
               

               
Cow position:
               
chr21:38692467-38692017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
93-544
               

               
Cow position:
               
chr21:17184190-17183741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 209
               

               
Conread position:
               
93-552
               

               
Cow position:
               
chr21:40899612-40899148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
93-552
               

               
Cow position:
               
chr21:47464847-47465309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr21:13047918-13048386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 243
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr21:25127882-25127419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr21:25345135-25344689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr21:30897699-30897230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr21:45970908-45971347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
94-254
               

               
Cow position:
               
chr21:5345152-5344984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-274
               

               
Cow position:
               
chr21:31278459-31278269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
94-288
               

               
Cow position:
               
chr21:13883747-13883553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
94-289
               

               
Cow position:
               
chr21:26828700-26828900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
94-395
               

               
Cow position:
               
chr21:20165910-20165612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
94-412
               

               
Cow position:
               
chr21:21907170-21907475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
94-413
               

               
Cow position:
               
chr21:11779267-11779576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
94-455
               

               
Cow position:
               
chr21:30835638-30835270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 190
               

               
Conread position:
               
94-470
               

               
Cow position:
               
chr21:10673380-10673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
94-504
               

               
Cow position:
               
chr21:13089200-13089610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
43, 173
               

               
Conread position:
               
94-513
               

               
Cow position:
               
chr21:10007366-10007792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 239
               

               
Conread position:
               
94-515
               

               
Cow position:
               
chr21:13840599-13840169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
94-542
               

               
Cow position:
               
chr21:643590-643155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
94-548
               

               
Cow position:
               
chr21:40786951-40786486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 162
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr21:641854-641395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr21:20925194-20925695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr21:44251570-44252015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 236
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr21:46848861-46849312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
94-574
               

               
Cow position:
               
chr21:6051776-6051297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 212
               

               
Conread position:
               
94-575
               

               
Cow position:
               
chr21:27521071-27521535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
95-247
               

               
Cow position:
               
chr21:28604352-28604204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
95-261
               

               
Cow position:
               
chr21:32536661-32536495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
95-281
               

               
Cow position:
               
chr21:15271168-15271358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
95-288
               

               
Cow position:
               
chr21:27409468-27409660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr21:37928921-37928712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
95-324
               

               
Cow position:
               
chr21:40571202-40571419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
95-425
               

               
Cow position:
               
chr21:28919260-28919585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
7, 132
               

               
Conread position:
               
95-550
               

               
Cow position:
               
chr21:4281614-4282054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
95-553
               

               
Cow position:
               
chr21:34740096-34739660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
95-574
               

               
Cow position:
               
chr21:27123855-27124340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 235
               

               
Conread position:
               
96-531
               

               
Cow position:
               
chr21:32339474-32339906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
96-575
               

               
Cow position:
               
chr21:8618530-8618064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 203
               

               
Conread position:
               
96-575
               

               
Cow position:
               
chr21:24598914-24598447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
97-370
               

               
Cow position:
               
chr21:41917971-41918245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
97-391
               

               
Cow position:
               
chr21:41041216-41040908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
97-532
               

               
Cow position:
               
chr21:29213891-29214319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
98-239
               

               
Cow position:
               
chr21:33244615-33244750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
98-249
               

               
Cow position:
               
chr21:16119895-16120050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
98-261
               

               
Cow position:
               
chr21:30031128-30031287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
98-278
               

               
Cow position:
               
chr21:36121496-36121309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
98-294
               

               
Cow position:
               
chr21:8986293-8986088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 181
               

               
Conread position:
               
98-296
               

               
Cow position:
               
chr21:29418840-29418636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 177
               

               
Conread position:
               
98-301
               

               
Cow position:
               
chr21:12349035-12348824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
98-332
               

               
Cow position:
               
chr21:976882-977118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
98-399
               

               
Cow position:
               
chr21:13395848-13395565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
230, 35
               

               
Conread position:
               
98-416
               

               
Cow position:
               
chr21:31159654-31159362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
98-417
               

               
Cow position:
               
chr21:868652-868976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 230
               

               
Conread position:
               
98-456
               

               
Cow position:
               
chr21:45906356-45906714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
98-515
               

               
Cow position:
               
chr21:15584159-15584563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
98-546
               

               
Cow position:
               
chr21:15911645-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 39
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:3236770-3236343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:5427194-5426757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:5898142-5898588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:14464853-14464388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 248
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:31253796-31253346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:36763329-36762864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 355
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:38449185-38449641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 160
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr21:39888459-39888933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
35, 261
               

               
Conread position:
               
98-569
               

               
Cow position:
               
chr21:41974099-41974583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 184
               

               
Conread position:
               
98-575
               

               
Cow position:
               
chr21:23587139-23586666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
99-263
               

               
Cow position:
               
chr21:43655968-43655799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
99-273
               

               
Cow position:
               
chr21:438822-438649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
99-399
               

               
Cow position:
               
chr21:42209380-42209664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
99-552
               

               
Cow position:
               
chr21:37480230-37479768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
99-573
               

               
Cow position:
               
chr21:15741837-15742299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
100-263
               

               
Cow position:
               
chr21:20413092-20412923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
100-296
               

               
Cow position:
               
chr21:21940146-21940343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
100-482
               

               
Cow position:
               
chr21:47363459-47363861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
101-278
               

               
Cow position:
               
chr21:2536872-2537057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
101-293
               

               
Cow position:
               
chr21:42146408-42146213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr21:37837814-37838042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
101-553
               

               
Cow position:
               
chr21:21223526-21223101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
101-553
               

               
Cow position:
               
chr21:29014653-29015081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
101-567
               

               
Cow position:
               
chr21:49699773-49700240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 214
               

               
Conread position:
               
104-273
               

               
Cow position:
               
chr21:37495683-37495859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
104-293
               

               
Cow position:
               
chr21:49353885-49353703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
104-368
               

               
Cow position:
               
chr21:46599619-46599362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
104-452
               

               
Cow position:
               
chr21:22209982-22210333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
104-549
               

               
Cow position:
               
chr21:30231435-30231888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
104-553
               

               
Cow position:
               
chr21:31691733-31691288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 76
               

               
Conread position:
               
104-553
               

               
Cow position:
               
chr21:47763865-47764301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 27
               

               
Conread position:
               
104-571
               

               
Cow position:
               
chr21:30848687-30849145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
104-574
               

               
Cow position:
               
chr21:1059319-1058868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 27
               

               
Conread position:
               
105-515
               

               
Cow position:
               
chr21:18064666-18065077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
106-239
               

               
Cow position:
               
chr21:30368333-30368197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-245
               

               
Cow position:
               
chr21:18497740-18497879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
106-260
               

               
Cow position:
               
chr21:8358970-8359125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr21:34581450-34581594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
106-283
               

               
Cow position:
               
chr21:31658895-31659070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
106-284
               

               
Cow position:
               
chr21:15305036-15305223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-285
               

               
Cow position:
               
chr21:18341478-18341293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
106-293
               

               
Cow position:
               
chr21:2785242-2785419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
106-294
               

               
Cow position:
               
chr21:19868703-19868889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-296
               

               
Cow position:
               
chr21:27810651-27810454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr21:28907290-28907481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr21:30658120-30657933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr21:40820592-40820790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr21:46972906-46973088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr21:48482271-48482465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
106-319
               

               
Cow position:
               
chr21:46612545-46612753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr21:24797914-24797693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
27, 162
               

               
Conread position:
               
106-325
               

               
Cow position:
               
chr21:44829497-44829724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr21:17252718-17252951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr21:43693076-43692846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
106-354
               

               
Cow position:
               
chr21:20163967-20163715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
106-399
               

               
Cow position:
               
chr21:17983230-17982943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr21:36910996-36910695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
106-413
               

               
Cow position:
               
chr21:22014450-22014140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
106-416
               

               
Cow position:
               
chr21:28030538-28030250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
106-436
               

               
Cow position:
               
chr21:33413838-33414158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
106-437
               

               
Cow position:
               
chr21:47719046-47719373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
106-497
               

               
Cow position:
               
chr21:20153216-20152812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
106-515
               

               
Cow position:
               
chr21:6909630-6910037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
106-524
               

               
Cow position:
               
chr21:9301484-9301044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 196
               

               
Conread position:
               
106-530
               

               
Cow position:
               
chr21:23310695-23311113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr21:30592055-30592474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
106-545
               

               
Cow position:
               
chr21:802064-802475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:10264294-10263854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:15444823-15445268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:21215898-21216330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:22718524-22718970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:23568484-23568019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 226
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:32559112-32559543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr21:42135360-42135813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 217
               

               
Conread position:
               
106-554
               

               
Cow position:
               
chr21:23535972-23535523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 200
               

               
Conread position:
               
106-567
               

               
Cow position:
               
chr21:24296506-24296967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
106-574
               

               
Cow position:
               
chr21:40134405-40133946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
107-245
               

               
Cow position:
               
chr21:9315059-9314920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
107-252
               

               
Cow position:
               
chr21:42920742-42920896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
107-261
               

               
Cow position:
               
chr21:21159061-21158910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
107-285
               

               
Cow position:
               
chr21:32647928-32648114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
107-297
               

               
Cow position:
               
chr21:26735655-26735472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
107-324
               

               
Cow position:
               
chr21:16498773-16498555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr21:9311313-9310854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 186
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr21:24858574-24858122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 169
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr21:29069065-29069518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 201
               

               
Conread position:
               
107-574
               

               
Cow position:
               
chr21:4400051-4399590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
109-257
               

               
Cow position:
               
chr21:2294268-2294126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
110-263
               

               
Cow position:
               
chr21:4043777-4043627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
110-335
               

               
Cow position:
               
chr21:12104608-12104390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
110-417
               

               
Cow position:
               
chr21:47713752-47714054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
110-553
               

               
Cow position:
               
chr21:82314-81881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
110-553
               

               
Cow position:
               
chr21:3585109-3585545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 198
               

               
Conread position:
               
110-554
               

               
Cow position:
               
chr21:18568382-18568841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 196
               

               
Conread position:
               
110-574
               

               
Cow position:
               
chr21:11644711-11645178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 213
               

               
Conread position:
               
111-296
               

               
Cow position:
               
chr21:24351105-24350916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
111-317
               

               
Cow position:
               
chr21:13225971-13225758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
111-325
               

               
Cow position:
               
chr21:20213517-20213742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 199
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr21:29658528-29658301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 132
               

               
Conread position:
               
111-337
               

               
Cow position:
               
chr21:44724122-44724344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
111-368
               

               
Cow position:
               
chr21:19240624-19240874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
111-398
               

               
Cow position:
               
chr21:36695836-36696122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
111-460
               

               
Cow position:
               
chr21:10817288-10816925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
111-507
               

               
Cow position:
               
chr21:10004629-10005031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 148
               

               
Conread position:
               
111-532
               

               
Cow position:
               
chr21:41198143-41198582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
66, 222
               

               
Conread position:
               
111-551
               

               
Cow position:
               
chr21:38918456-38918028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
111-551
               

               
Cow position:
               
chr21:48637501-48637933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
111-553
               

               
Cow position:
               
chr21:15867555-15867123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
111-553
               

               
Cow position:
               
chr21:41621382-41620930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
111-554
               

               
Cow position:
               
chr21:41156125-41155672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 224
               

               
Conread position:
               
111-567
               

               
Cow position:
               
chr21:23606921-23606470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 22
               

               
Conread position:
               
112-246
               

               
Cow position:
               
chr21:40916734-40916597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
112-553
               

               
Cow position:
               
chr21:11739866-11740321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
112-553
               

               
Cow position:
               
chr21:17193495-17193949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 210
               

               
Conread position:
               
113-250
               

               
Cow position:
               
chr21:40930224-40930365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr21:42189508-42189686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr21:13589014-13588763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
113-531
               

               
Cow position:
               
chr21:12087829-12087422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
113-553
               

               
Cow position:
               
chr21:3763499-3763926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
356, 18
               

               
Conread position:
               
114-250
               

               
Cow position:
               
chr21:31258720-31258576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
114-263
               

               
Cow position:
               
chr21:3015943-3016089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
114-288
               

               
Cow position:
               
chr21:18783215-18783397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
114-302
               

               
Cow position:
               
chr21:42017350-42017546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
114-332
               

               
Cow position:
               
chr21:24266310-24266536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 195
               

               
Conread position:
               
114-342
               

               
Cow position:
               
chr21:41287545-41287773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 210
               

               
Conread position:
               
114-447
               

               
Cow position:
               
chr21:41107525-41107846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
114-452
               

               
Cow position:
               
chr21:28237448-28237803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
114-492
               

               
Cow position:
               
chr21:34151827-34151450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr21:28028050-28027616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 177
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr21:8351043-8351493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 194
               

               
Conread position:
               
114-553
               

               
Cow position:
               
chr21:14760808-14760391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
115-264
               

               
Cow position:
               
chr21:45446788-45446630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
116-263
               

               
Cow position:
               
chr21:15413953-15414097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
116-490
               

               
Cow position:
               
chr21:10561336-10561712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
116-553
               

               
Cow position:
               
chr21:3360767-3361203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 175
               

               
Conread position:
               
117-321
               

               
Cow position:
               
chr21:41610427-41610206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
117-442
               

               
Cow position:
               
chr21:10410471-10410139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
117-532
               

               
Cow position:
               
chr21:28810027-28810433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 56
               

               
Conread position:
               
118-250
               

               
Cow position:
               
chr21:36398321-36398453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
119-276
               

               
Cow position:
               
chr21:7424767-7424930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
125-318
               

               
Cow position:
               
chr21:7221108-7221298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
131-417
               

               
Cow position:
               
chr21:7377690-7377980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
39, 194
               

               
Conread position:
               
131-552
               

               
Cow position:
               
chr21:19615405-19614985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
131-553
               

               
Cow position:
               
chr21:6624392-6623954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 194
               

               
Conread position:
               
131-553
               

               
Cow position:
               
chr21:41579988-41579562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
133-263
               

               
Cow position:
               
chr21:9590771-9590636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
135-513
               

               
Cow position:
               
chr21:26245137-26244780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 25
               

               
Conread position:
               
135-553
               

               
Cow position:
               
chr21:19259045-19258637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr21:6735966-6736126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-494
               

               
Cow position:
               
chr21:27669234-27668880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 7
               

               
Conread position:
               
138-263
               

               
Cow position:
               
chr21:3430778-3430655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
138-263
               

               
Cow position:
               
chr21:9736937-9736807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
138-299
               

               
Cow position:
               
chr21:30243459-30243620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-320
               

               
Cow position:
               
chr21:44860905-44861073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
138-370
               

               
Cow position:
               
chr21:7768661-7768435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
46, 185
               

               
Conread position:
               
138-504
               

               
Cow position:
               
chr21:42007233-42007602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
138-553
               

               
Cow position:
               
chr21:17642763-17643159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
139-292
               

               
Cow position:
               
chr21:13043800-13043952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
140-542
               

               
Cow position:
               
chr21:27145764-27146172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
140-568
               

               
Cow position:
               
chr21:28924330-28923923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr21:46470400-46470213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
154-263
               

               
Cow position:
               
chr21:40546451-40546556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
155-545
               

               
Cow position:
               
chr21:9990720-9990333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
155-553
               

               
Cow position:
               
chr21:45329745-45330129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
100, 111
               

               
Conread position:
               
156-552
               

               
Cow position:
               
chr21:21169293-21169687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
158-547
               

               
Cow position:
               
chr21:47823062-47823454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
160-324
               

               
Cow position:
               
chr21:44592009-44592173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-337
               

               
Cow position:
               
chr21:30119893-30119717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
160-515
               

               
Cow position:
               
chr21:45920858-45921212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
160-532
               

               
Cow position:
               
chr21:33563202-33562845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 19
               

               
Conread position:
               
160-552
               

               
Cow position:
               
chr21:36795804-36795414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
160-553
               

               
Cow position:
               
chr21:19767053-19766665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
161-332
               

               
Cow position:
               
chr21:6388199-6388027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
161-573
               

               
Cow position:
               
chr21:38121302-38120899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 156
               

               
Conread position:
               
163-553
               

               
Cow position:
               
chr21:10152003-10151606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
166-552
               

               
Cow position:
               
chr21:10514998-10514619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
167-285
               

               
Cow position:
               
chr21:21479110-21479226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
167-297
               

               
Cow position:
               
chr21:14228086-14228217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
167-324
               

               
Cow position:
               
chr21:8213089-8213242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
167-324
               

               
Cow position:
               
chr21:11057689-11057842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
167-326
               

               
Cow position:
               
chr21:42463500-42463654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
167-342
               

               
Cow position:
               
chr21:19359982-19360156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
167-411
               

               
Cow position:
               
chr21:10538061-10538295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
167-415
               

               
Cow position:
               
chr21:29014368-29014609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
149, 14
               

               
Conread position:
               
167-444
               

               
Cow position:
               
chr21:30256080-30256350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
167-485
               

               
Cow position:
               
chr21:40168432-40168753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
167-532
               

               
Cow position:
               
chr21:18790372-18790726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr21:33350935-33350553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
168-399
               

               
Cow position:
               
chr21:734780-734563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
198, 11
               

               
Conread position:
               
168-465
               

               
Cow position:
               
chr21:3400639-3400936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
168-515
               

               
Cow position:
               
chr21:7581712-7582063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
168-515
               

               
Cow position:
               
chr21:24642705-24642365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
168-535
               

               
Cow position:
               
chr21:713136-712761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 266
               

               
Conread position:
               
168-547
               

               
Cow position:
               
chr21:5392342-5392725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
168-552
               

               
Cow position:
               
chr21:33264037-33263660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
168-554
               

               
Cow position:
               
chr21:1591740-1591361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
168-566
               

               
Cow position:
               
chr21:46264361-46263973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
209, 21
               

               
Conread position:
               
168-569
               

               
Cow position:
               
chr21:23321885-23322285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 129
               

               
Conread position:
               
168-574
               

               
Cow position:
               
chr21:33912-33512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
168-575
               

               
Cow position:
               
chr21:2927014-2927415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
207, 11
               

               
Conread position:
               
168-575
               

               
Cow position:
               
chr21:3818401-3818006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
169-553
               

               
Cow position:
               
chr21:10118756-10118364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
169-553
               

               
Cow position:
               
chr21:36297686-36297290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
170-289
               

               
Cow position:
               
chr21:43265204-43265324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
170-497
               

               
Cow position:
               
chr21:11360217-11359902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
170-520
               

               
Cow position:
               
chr21:10633450-10633799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
170-553
               

               
Cow position:
               
chr21:41598002-41597626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
170-553
               

               
Cow position:
               
chr21:42384696-42384316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 11
               

               
Conread position:
               
170-554
               

               
Cow position:
               
chr21:13127908-13128281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
171-474
               

               
Cow position:
               
chr21:25628720-25629019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
171-553
               

               
Cow position:
               
chr21:27341405-27341786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
172-284
               

               
Cow position:
               
chr21:42562815-42562706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
172-296
               

               
Cow position:
               
chr21:265811-265688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr21:22939959-22939806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr21:30980389-30980538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
172-374
               

               
Cow position:
               
chr21:30157617-30157812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
172-460
               

               
Cow position:
               
chr21:42022462-42022193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
213, 19
               

               
Conread position:
               
172-474
               

               
Cow position:
               
chr21:8452095-8451787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
172-531
               

               
Cow position:
               
chr21:28989801-28989443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
172-532
               

               
Cow position:
               
chr21:15976821-15976471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
172-537
               

               
Cow position:
               
chr21:26647827-26648181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
172-553
               

               
Cow position:
               
chr21:29001968-29002351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
172-566
               

               
Cow position:
               
chr21:45473570-45473961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 150
               

               
Conread position:
               
172-567
               

               
Cow position:
               
chr21:24607563-24607181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
242, 7
               

               
Conread position:
               
172-575
               

               
Cow position:
               
chr21:29485167-29484774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
173-287
               

               
Cow position:
               
chr21:31582266-31582378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
173-290
               

               
Cow position:
               
chr21:7493087-7493203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
173-291
               

               
Cow position:
               
chr21:25159359-25159241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
173-344
               

               
Cow position:
               
chr21:7823551-7823379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
173-439
               

               
Cow position:
               
chr21:36910119-36909858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 118
               

               
Conread position:
               
173-491
               

               
Cow position:
               
chr21:2809975-2810273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 93
               

               
Conread position:
               
173-553
               

               
Cow position:
               
chr21:42413910-42414291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 149
               

               
Conread position:
               
173-554
               

               
Cow position:
               
chr21:28626425-28626051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
174-527
               

               
Cow position:
               
chr21:15611326-15610986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
295, 98
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr21:34565029-34565402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
175-553
               

               
Cow position:
               
chr21:13365527-13365152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 95
               

               
Conread position:
               
175-569
               

               
Cow position:
               
chr21:32665567-32665978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
176-532
               

               
Cow position:
               
chr21:28191217-28190858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
176-532
               

               
Cow position:
               
chr21:35897442-35897796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
177-553
               

               
Cow position:
               
chr21:396051-395687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
178-530
               

               
Cow position:
               
chr21:10001257-10000912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 119
               

               
Conread position:
               
179-553
               

               
Cow position:
               
chr21:25286693-25286320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
197, 10
               

               
Conread position:
               
181-331
               

               
Cow position:
               
chr21:7681276-7681129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
181-543
               

               
Cow position:
               
chr21:9028794-9028439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
206, 24
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr21:44671923-44671564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
181-569
               

               
Cow position:
               
chr21:28429623-28429245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
181-576
               

               
Cow position:
               
chr21:18828124-18828522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 33
               

               
Conread position:
               
182-317
               

               
Cow position:
               
chr21:26567600-26567735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
182-333
               

               
Cow position:
               
chr21:17063099-17062953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
182-395
               

               
Cow position:
               
chr21:37235563-37235361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
211, 117
               

               
Conread position:
               
182-441
               

               
Cow position:
               
chr21:31662181-31661927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
182-453
               

               
Cow position:
               
chr21:40769471-40769219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
182-476
               

               
Cow position:
               
chr21:6696840-6697144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 116
               

               
Conread position:
               
182-483
               

               
Cow position:
               
chr21:46551924-46552225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
182-513
               

               
Cow position:
               
chr21:46607416-46607735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr21:18941657-18942018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
227, 37
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr21:24698658-24698300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
188, 50
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr21:35997349-35996983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
182-569
               

               
Cow position:
               
chr21:31662645-31662256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 145
               

               
Conread position:
               
182-572
               

               
Cow position:
               
chr21:23786209-23785825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
188, 50
               

               
Conread position:
               
182-572
               

               
Cow position:
               
chr21:46242063-46242446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
191, 44
               

               
Conread position:
               
182-575
               

               
Cow position:
               
chr21:4276426-4276806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
205, 37
               

               
Conread position:
               
182-576
               

               
Cow position:
               
chr21:4099047-4098666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
188, 83
               

               
Conread position:
               
183-313
               

               
Cow position:
               
chr21:5341917-5342047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-546
               

               
Cow position:
               
chr21:4723658-4723297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr21:5153797-5153428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr21:23800951-23801310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 131
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr21:30150066-30150458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr21:31576668-31576323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 54
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr21:35569187-35569573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
96, 173
               

               
Conread position:
               
183-566
               

               
Cow position:
               
chr21:18779799-18780171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
189, 102
               

               
Conread position:
               
183-566
               

               
Cow position:
               
chr21:18844834-18845218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
183-573
               

               
Cow position:
               
chr21:25383203-25382801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr21:27568996-27569368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
152, 73
               

               
Conread position:
               
184-406
               

               
Cow position:
               
chr21:471850-471637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
193, 35
               

               
Conread position:
               
185-477
               

               
Cow position:
               
chr21:2657984-2657704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
185-550
               

               
Cow position:
               
chr21:18289833-18289475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
184, 44
               

               
Conread position:
               
185-553
               

               
Cow position:
               
chr21:21077484-21077140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
202, 62
               

               
Conread position:
               
186-297
               

               
Cow position:
               
chr21:38267888-38267999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-408
               

               
Cow position:
               
chr21:40192131-40192339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
207, 9
               

               
Conread position:
               
186-418
               

               
Cow position:
               
chr21:27406070-27406305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 149
               

               
Conread position:
               
186-446
               

               
Cow position:
               
chr21:29382987-29382737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
186-545
               

               
Cow position:
               
chr21:8235388-8235728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
186, 76
               

               
Conread position:
               
186-548
               

               
Cow position:
               
chr21:37344927-37345286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 109
               

               
Conread position:
               
187-330
               

               
Cow position:
               
chr21:12207629-12207772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-553
               

               
Cow position:
               
chr21:28955671-28955333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
191-315
               

               
Cow position:
               
chr21:35647659-35647783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-518
               

               
Cow position:
               
chr21:20260150-20260477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
191-530
               

               
Cow position:
               
chr21:28211360-28211028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
203, 51
               

               
Conread position:
               
191-553
               

               
Cow position:
               
chr21:28997743-28998095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
191-564
               

               
Cow position:
               
chr21:35354702-35354335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
192-552
               

               
Cow position:
               
chr21:30990119-30990456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
192-553
               

               
Cow position:
               
chr21:2679716-2679363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 12
               

               
Conread position:
               
192-553
               

               
Cow position:
               
chr21:8125637-8125985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
218, 83
               

               
Conread position:
               
192-566
               

               
Cow position:
               
chr21:12801579-12801945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 140
               

               
Conread position:
               
195-324
               

               
Cow position:
               
chr21:8231513-8231641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
195-333
               

               
Cow position:
               
chr21:23460298-23460163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
195-551
               

               
Cow position:
               
chr21:12617327-12616952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
196-542
               

               
Cow position:
               
chr21:8549843-8549499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
197-474
               

               
Cow position:
               
chr21:36789959-36789686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
199-472
               

               
Cow position:
               
chr21:20418521-20418794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
176, 122
               

               
Conread position:
               
199-553
               

               
Cow position:
               
chr21:5567147-5566800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
199-553
               

               
Cow position:
               
chr21:37941522-37941876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr21:45330446-45330820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
201-537
               

               
Cow position:
               
chr21:44754621-44754952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
208, 24
               

               
Conread position:
               
201-553
               

               
Cow position:
               
chr21:13738712-13738382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
201-554
               

               
Cow position:
               
chr21:32574889-32574543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
202-532
               

               
Cow position:
               
chr21:41878627-41878306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
169, 39
               

               
Conread position:
               
203-553
               

               
Cow position:
               
chr21:4998338-4998674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
168, 87
               

               
Conread position:
               
204-548
               

               
Cow position:
               
chr21:17175291-17174956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
204-553
               

               
Cow position:
               
chr21:20044608-20044960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
204-575
               

               
Cow position:
               
chr21:19363304-19363676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
174, 15
               

               
Conread position:
               
205-524
               

               
Cow position:
               
chr21:39401745-39401432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
207-575
               

               
Cow position:
               
chr21:35062235-35061876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
189, 30
               

               
Conread position:
               
208-575
               

               
Cow position:
               
chr21:34160103-34159748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
179, 6
               

               
Conread position:
               
209-553
               

               
Cow position:
               
chr21:42540071-42540409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
176, 90
               

               
Conread position:
               
210-465
               

               
Cow position:
               
chr21:32904005-32904257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
210-549
               

               
Cow position:
               
chr21:18842087-18842423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
174, 113
               

               
Conread position:
               
211-549
               

               
Cow position:
               
chr21:30606937-30607273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
211-553
               

               
Cow position:
               
chr21:34390826-34391159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 112
               

               
Conread position:
               
212-531
               

               
Cow position:
               
chr21:43357108-43357430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
213-502
               

               
Cow position:
               
chr21:11251016-11250725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
213-560
               

               
Cow position:
               
chr21:10601228-10601564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
219-569
               

               
Cow position:
               
chr21:23499688-23500025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
151, 13
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr21:12960755-12961109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
221-552
               

               
Cow position:
               
chr21:33729569-33729245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
188, 105
               

               
Conread position:
               
230-553
               

               
Cow position:
               
chr21:3417476-3417157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
231-574
               

               
Cow position:
               
chr21:17616186-17616535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
235-553
               

               
Cow position:
               
chr21:5636595-5636910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
237-480
               

               
Cow position:
               
chr21:38664762-38664522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
238-566
               

               
Cow position:
               
chr21:10727399-10727078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
239-553
               

               
Cow position:
               
chr21:36162838-36163152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 100
               

               
Conread position:
               
239-575
               

               
Cow position:
               
chr21:46829152-46829480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
148, 6
               

               
Conread position:
               
242-553
               

               
Cow position:
               
chr21:24131187-24130892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
227, 69
               

               
Conread position:
               
244-553
               

               
Cow position:
               
chr21:426923-426601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
253-448
               

               
Cow position:
               
chr21:13495649-13495455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
255-553
               

               
Cow position:
               
chr21:11640126-11639831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
256-567
               

               
Cow position:
               
chr21:32536081-32535772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
265-474
               

               
Cow position:
               
chr21:34722693-34722897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
266-527
               

               
Cow position:
               
chr21:27624823-27624547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
266-545
               

               
Cow position:
               
chr21:39450065-39450349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr21:3380985-3381270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr21:28993523-28993815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
268-553
               

               
Cow position:
               
chr21:3813391-3813672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
268-553
               

               
Cow position:
               
chr21:47802167-47802449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
268-572
               

               
Cow position:
               
chr21:16166548-16166843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
269-553
               

               
Cow position:
               
chr21:5344757-5344472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
276-550
               

               
Cow position:
               
chr21:28443282-28443565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
276-553
               

               
Cow position:
               
chr21:13898272-13898002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
276-567
               

               
Cow position:
               
chr21:8985636-8985345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
276-575
               

               
Cow position:
               
chr21:37361380-37361682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
281-552
               

               
Cow position:
               
chr21:9862563-9862813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
282-569
               

               
Cow position:
               
chr21:34347097-34346799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
283-567
               

               
Cow position:
               
chr21:36793972-36793678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
283-572
               

               
Cow position:
               
chr21:29247773-29248051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
286-553
               

               
Cow position:
               
chr21:32237383-32237108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
287-553
               

               
Cow position:
               
chr21:42145992-42145727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
304-553
               

               
Cow position:
               
chr21:16612689-16612440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
304-553
               

               
Cow position:
               
chr21:42913679-42913935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
304-568
               

               
Cow position:
               
chr21:28882201-28881939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
308-507
               

               
Cow position:
               
chr21:18041787-18041988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
308-508
               

               
Cow position:
               
chr21:17856604-17856398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
308-558
               

               
Cow position:
               
chr21:18495030-18494772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
309-553
               

               
Cow position:
               
chr21:42190112-42190354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
309-573
               

               
Cow position:
               
chr21:26870929-26870671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
312-532
               

               
Cow position:
               
chr21:29979700-29979926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
313-553
               

               
Cow position:
               
chr21:41957113-41957363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
314-553
               

               
Cow position:
               
chr21:42459479-42459736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
315-573
               

               
Cow position:
               
chr21:12973190-12973461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 223
               

               
Conread position:
               
316-552
               

               
Cow position:
               
chr21:5597205-5596958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 230
               

               
Conread position:
               
317-553
               

               
Cow position:
               
chr21:394076-393832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
318-553
               

               
Cow position:
               
chr21:4080412-4080165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
318-556
               

               
Cow position:
               
chr21:5595710-5595469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr21:40058859-40058617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 218
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr21:45151565-45151812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
320-554
               

               
Cow position:
               
chr21:13409775-13410013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
321-545
               

               
Cow position:
               
chr21:11706694-11706932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 228
               

               
Conread position:
               
321-552
               

               
Cow position:
               
chr21:42905324-42905566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
321-554
               

               
Cow position:
               
chr21:29943051-29942816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
322-567
               

               
Cow position:
               
chr21:4795273-4795018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
325-553
               

               
Cow position:
               
chr21:31676542-31676309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
325-553
               

               
Cow position:
               
chr21:37282348-37282120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
326-568
               

               
Cow position:
               
chr21:5426018-5425778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
328-462
               

               
Cow position:
               
chr21:4568327-4568186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
328-532
               

               
Cow position:
               
chr21:49662081-49662288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
328-553
               

               
Cow position:
               
chr21:23149978-23150208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
328-554
               

               
Cow position:
               
chr21:44093824-44093589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 6
               

               
Conread position:
               
328-558
               

               
Cow position:
               
chr21:8289590-8289836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 222
               

               
Conread position:
               
328-573
               

               
Cow position:
               
chr21:27743790-27743534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
329-497
               

               
Cow position:
               
chr21:39809937-39809764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
329-551
               

               
Cow position:
               
chr21:42024165-42023938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
329-552
               

               
Cow position:
               
chr21:6102218-6102457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
329-558
               

               
Cow position:
               
chr21:21480141-21480372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
329-566
               

               
Cow position:
               
chr21:5137443-5137693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 226
               

               
Conread position:
               
329-573
               

               
Cow position:
               
chr21:5454948-5455190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
330-553
               

               
Cow position:
               
chr21:40244481-40244245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 218
               

               
Conread position:
               
330-568
               

               
Cow position:
               
chr21:28944321-28944567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 214
               

               
Conread position:
               
331-552
               

               
Cow position:
               
chr21:1464271-1464040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 214
               

               
Conread position:
               
331-553
               

               
Cow position:
               
chr21:18783647-18783870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
331-572
               

               
Cow position:
               
chr21:2785738-2785985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
332-571
               

               
Cow position:
               
chr21:46973094-46973332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
334-573
               

               
Cow position:
               
chr21:33791329-33791575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 210
               

               
Conread position:
               
336-553
               

               
Cow position:
               
chr21:17302343-17302565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
337-553
               

               
Cow position:
               
chr21:33210235-33210009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
337-573
               

               
Cow position:
               
chr21:24888042-24887801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 204
               

               
Conread position:
               
337-575
               

               
Cow position:
               
chr21:24094716-24094954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
338-532
               

               
Cow position:
               
chr21:26829225-26829416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
338-551
               

               
Cow position:
               
chr21:911934-912154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 204
               

               
Conread position:
               
339-553
               

               
Cow position:
               
chr21:48484415-48484630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
343-532
               

               
Cow position:
               
chr21:20426555-20426362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
344-567
               

               
Cow position:
               
chr21:34659061-34658830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
349-553
               

               
Cow position:
               
chr21:42463812-42464033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
351-553
               

               
Cow position:
               
chr21:23478697-23478908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 176
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr21:28512548-28512343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 176
               

               
Conread position:
               
352-553
               

               
Cow position:
               
chr21:36819193-36819402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 191
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr21:4189829-4189645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 174
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr21:13163884-13163704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr21:24085582-24085759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
376-553
               

               
Cow position:
               
chr21:42348683-42348867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 166
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr21:5635029-5634835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
384-574
               

               
Cow position:
               
chr21:31159245-31159044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
387-535
               

               
Cow position:
               
chr21:18978872-18979019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
387-556
               

               
Cow position:
               
chr21:34254300-34254474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
389-566
               

               
Cow position:
               
chr21:13256778-13256603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
389-567
               

               
Cow position:
               
chr21:44220196-44220017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
392-542
               

               
Cow position:
               
chr21:35897456-35897304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
393-553
               

               
Cow position:
               
chr21:28029370-28029208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
394-552
               

               
Cow position:
               
chr21:34738568-34738410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
401-553
               

               
Cow position:
               
chr21:36712160-36712009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 133
               

               
Conread position:
               
403-553
               

               
Cow position:
               
chr21:28919663-28919815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
407-546
               

               
Cow position:
               
chr21:13301107-13300971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
407-553
               

               
Cow position:
               
chr21:24714608-24714464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
410-553
               

               
Cow position:
               
chr21:20162491-20162346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
410-553
               

               
Cow position:
               
chr21:31278731-31278590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
411-575
               

               
Cow position:
               
chr21:20548959-20549120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr21:17282654-17282514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 122
               
Show alignments to all cow chromosomes.