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Cow genome map

           
Conread name:
           
Pig2-110D05
        

               
Conread position:
               
43-289
               

               
Cow position:
               
chr29:25793393-25793151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
50-513
               

               
Cow position:
               
chr29:16657940-16657469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
58-515
               

               
Cow position:
               
chr29:3711621-3711168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 195
               

               
Conread position:
               
63-569
               

               
Cow position:
               
chr29:32799463-32799976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
65-260
               

               
Cow position:
               
chr29:2414515-2414718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
67-297
               

               
Cow position:
               
chr29:29308346-29308574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
69-532
               

               
Cow position:
               
chr29:42406912-42406426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 43
               

               
Conread position:
               
71-499
               

               
Cow position:
               
chr29:11434339-11433920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
72-332
               

               
Cow position:
               
chr29:28066706-28066454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
72-376
               

               
Cow position:
               
chr29:28994084-28993790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
73-556
               

               
Cow position:
               
chr29:39111097-39111565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
76-553
               

               
Cow position:
               
chr29:26129709-26129245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
77-552
               

               
Cow position:
               
chr29:24624460-24623988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
77-553
               

               
Cow position:
               
chr29:16609977-16609484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 263
               

               
Conread position:
               
78-288
               

               
Cow position:
               
chr29:32215927-32215713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
78-341
               

               
Cow position:
               
chr29:32656657-32656387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
78-548
               

               
Cow position:
               
chr29:24293094-24292627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
78-553
               

               
Cow position:
               
chr29:27668432-27668896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 262
               

               
Conread position:
               
79-289
               

               
Cow position:
               
chr29:684960-685168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
79-344
               

               
Cow position:
               
chr29:39038049-39038318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
79-417
               

               
Cow position:
               
chr29:5789237-5788891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
80-214
               

               
Cow position:
               
chr29:31835493-31835352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
80-306
               

               
Cow position:
               
chr29:8634871-8634643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
80-515
               

               
Cow position:
               
chr29:19428869-19428445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
81-271
               

               
Cow position:
               
chr29:31221960-31221772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
81-297
               

               
Cow position:
               
chr29:22729784-22729565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
81-470
               

               
Cow position:
               
chr29:35442264-35442634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
81-474
               

               
Cow position:
               
chr29:5520260-5520691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
82-261
               

               
Cow position:
               
chr29:1959734-1959913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
82-261
               

               
Cow position:
               
chr29:38732371-38732186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
82-263
               

               
Cow position:
               
chr29:10846846-10847034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
82-263
               

               
Cow position:
               
chr29:23678919-23678740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
82-376
               

               
Cow position:
               
chr29:23825878-23825598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr29:31489084-31488633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr29:4121078-4120592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 256
               

               
Conread position:
               
82-553
               

               
Cow position:
               
chr29:22175908-22175439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
82-566
               

               
Cow position:
               
chr29:9709910-9709431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
82-566
               

               
Cow position:
               
chr29:13028670-13028189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 201
               

               
Conread position:
               
83-264
               

               
Cow position:
               
chr29:10191828-10192010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
83-268
               

               
Cow position:
               
chr29:10203986-10203798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
83-345
               

               
Cow position:
               
chr29:4070838-4070577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 185
               

               
Conread position:
               
83-551
               

               
Cow position:
               
chr29:3237125-3237611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 260
               

               
Conread position:
               
84-289
               

               
Cow position:
               
chr29:44684315-44684104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 170
               

               
Conread position:
               
84-571
               

               
Cow position:
               
chr29:22162048-22162526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 47
               

               
Conread position:
               
85-225
               

               
Cow position:
               
chr29:11686488-11686632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
85-237
               

               
Cow position:
               
chr29:31593943-31594089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
85-553
               

               
Cow position:
               
chr29:109884-109456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
85-553
               

               
Cow position:
               
chr29:29475038-29475501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 217
               

               
Conread position:
               
86-297
               

               
Cow position:
               
chr29:12890890-12890682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
86-324
               

               
Cow position:
               
chr29:27819422-27819189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
87-289
               

               
Cow position:
               
chr29:17436960-17436756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
87-446
               

               
Cow position:
               
chr29:17236634-17236298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
87-456
               

               
Cow position:
               
chr29:12025266-12025629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr29:1933357-1933812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr29:11071492-11071958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
87-553
               

               
Cow position:
               
chr29:42363806-42364268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
87-575
               

               
Cow position:
               
chr29:12680369-12679879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
89-268
               

               
Cow position:
               
chr29:7414705-7414526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
89-270
               

               
Cow position:
               
chr29:936418-936231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr29:28087885-28087679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
89-313
               

               
Cow position:
               
chr29:26211264-26211031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
89-333
               

               
Cow position:
               
chr29:18556880-18556634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 236
               

               
Conread position:
               
89-377
               

               
Cow position:
               
chr29:38347818-38348102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
89-391
               

               
Cow position:
               
chr29:20770555-20770259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 179
               

               
Conread position:
               
89-411
               

               
Cow position:
               
chr29:1008031-1007706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
89-474
               

               
Cow position:
               
chr29:30188121-30188513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr29:11366424-11365993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr29:35292297-35291845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
89-553
               

               
Cow position:
               
chr29:37599034-37599458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
277, 16
               

               
Conread position:
               
90-289
               

               
Cow position:
               
chr29:38754728-38754934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
90-339
               

               
Cow position:
               
chr29:31651612-31651365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
90-408
               

               
Cow position:
               
chr29:8862288-8862585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
90-413
               

               
Cow position:
               
chr29:12625788-12626091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
90-448
               

               
Cow position:
               
chr29:3685312-3685661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
90-474
               

               
Cow position:
               
chr29:25092314-25091936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 179
               

               
Conread position:
               
90-507
               

               
Cow position:
               
chr29:6337859-6337452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
90-532
               

               
Cow position:
               
chr29:27858999-27858556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
90-532
               

               
Cow position:
               
chr29:35458559-35459006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
90-554
               

               
Cow position:
               
chr29:12762146-12761712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
90-554
               

               
Cow position:
               
chr29:41531062-41530595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
90-556
               

               
Cow position:
               
chr29:26017291-26017768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
90-572
               

               
Cow position:
               
chr29:23874673-23874181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 245
               

               
Conread position:
               
91-273
               

               
Cow position:
               
chr29:11894909-11894719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
91-321
               

               
Cow position:
               
chr29:31934585-31934352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr29:17804741-17804505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
91-324
               

               
Cow position:
               
chr29:31982029-31981801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
91-496
               

               
Cow position:
               
chr29:26270274-26269868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
92-260
               

               
Cow position:
               
chr29:2219594-2219421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
92-260
               

               
Cow position:
               
chr29:37293235-37293070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
92-282
               

               
Cow position:
               
chr29:26208166-26207987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
92-287
               

               
Cow position:
               
chr29:21666293-21666094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
92-339
               

               
Cow position:
               
chr29:16290931-16290681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
92-370
               

               
Cow position:
               
chr29:30350742-30350999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
92-454
               

               
Cow position:
               
chr29:28396902-28396532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
92-457
               

               
Cow position:
               
chr29:25814629-25814994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
92-531
               

               
Cow position:
               
chr29:22613630-22613198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
92-553
               

               
Cow position:
               
chr29:29769146-29769600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 168
               

               
Conread position:
               
92-556
               

               
Cow position:
               
chr29:8163616-8164120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 370
               

               
Conread position:
               
93-257
               

               
Cow position:
               
chr29:7040664-7040835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
93-289
               

               
Cow position:
               
chr29:501406-501202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
93-299
               

               
Cow position:
               
chr29:4023202-4022999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
93-421
               

               
Cow position:
               
chr29:3826173-3825851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
93-456
               

               
Cow position:
               
chr29:31674837-31674472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
93-476
               

               
Cow position:
               
chr29:37618514-37618126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
93-510
               

               
Cow position:
               
chr29:732817-732404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
93-536
               

               
Cow position:
               
chr29:4520536-4520096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
93-551
               

               
Cow position:
               
chr29:18021496-18021927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
93-553
               

               
Cow position:
               
chr29:36531070-36530609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
94-245
               

               
Cow position:
               
chr29:24119292-24119451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
94-261
               

               
Cow position:
               
chr29:33143151-33143321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
94-286
               

               
Cow position:
               
chr29:14746984-14746788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-288
               

               
Cow position:
               
chr29:4492638-4492442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-324
               

               
Cow position:
               
chr29:42630323-42630091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
94-333
               

               
Cow position:
               
chr29:32894463-32894224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
94-531
               

               
Cow position:
               
chr29:23845046-23844597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 184
               

               
Conread position:
               
94-546
               

               
Cow position:
               
chr29:3502768-3502309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
94-553
               

               
Cow position:
               
chr29:34297365-34297819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 228
               

               
Conread position:
               
94-573
               

               
Cow position:
               
chr29:2644115-2644580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
95-273
               

               
Cow position:
               
chr29:35189814-35189628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr29:16200271-16200469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
95-294
               

               
Cow position:
               
chr29:19420417-19420613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
95-297
               

               
Cow position:
               
chr29:19176710-19176916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
95-320
               

               
Cow position:
               
chr29:34359619-34359847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
21, 194
               

               
Conread position:
               
95-325
               

               
Cow position:
               
chr29:16279182-16278956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
95-373
               

               
Cow position:
               
chr29:5994884-5995168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
95-457
               

               
Cow position:
               
chr29:16272949-16272566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
95-465
               

               
Cow position:
               
chr29:4085501-4085152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
95-546
               

               
Cow position:
               
chr29:25737215-25737664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
95-553
               

               
Cow position:
               
chr29:15738144-15738598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
95-554
               

               
Cow position:
               
chr29:8669559-8669100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
96-320
               

               
Cow position:
               
chr29:9310808-9310574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
98-221
               

               
Cow position:
               
chr29:22991494-22991368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
98-241
               

               
Cow position:
               
chr29:27882044-27881895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr29:43088508-43088312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 168
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr29:14577059-14576858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
98-297
               

               
Cow position:
               
chr29:10318788-10318595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
98-370
               

               
Cow position:
               
chr29:18449937-18450199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
98-376
               

               
Cow position:
               
chr29:22721556-22721303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
98-413
               

               
Cow position:
               
chr29:7310865-7310576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
98-462
               

               
Cow position:
               
chr29:17297340-17296967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
98-542
               

               
Cow position:
               
chr29:6926183-6925775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr29:19762465-19762018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr29:26779078-26778630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
98-567
               

               
Cow position:
               
chr29:2744066-2744541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
98-571
               

               
Cow position:
               
chr29:29057381-29056914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 180
               

               
Conread position:
               
99-261
               

               
Cow position:
               
chr29:13064051-13063892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
99-268
               

               
Cow position:
               
chr29:11081193-11081370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
99-269
               

               
Cow position:
               
chr29:22652520-22652348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
99-308
               

               
Cow position:
               
chr29:15796685-15796473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
99-320
               

               
Cow position:
               
chr29:4423252-4423465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
99-370
               

               
Cow position:
               
chr29:20167624-20167358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
99-549
               

               
Cow position:
               
chr29:18073119-18072679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr29:32963724-32963300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
269, 32
               

               
Conread position:
               
99-553
               

               
Cow position:
               
chr29:40583986-40583543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
99-572
               

               
Cow position:
               
chr29:4479966-4480444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
99-572
               

               
Cow position:
               
chr29:10653523-10653069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
100-256
               

               
Cow position:
               
chr29:29296588-29296432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
100-297
               

               
Cow position:
               
chr29:26540340-26540543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
100-444
               

               
Cow position:
               
chr29:36220743-36220382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
100-514
               

               
Cow position:
               
chr29:35677341-35677762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
101-297
               

               
Cow position:
               
chr29:32655895-32656095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr29:30548973-30548733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
101-553
               

               
Cow position:
               
chr29:31929185-31928725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
104-263
               

               
Cow position:
               
chr29:29645128-29645291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
104-532
               

               
Cow position:
               
chr29:13639173-13639602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
104-553
               

               
Cow position:
               
chr29:24952883-24952432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
105-279
               

               
Cow position:
               
chr29:3538490-3538661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
105-292
               

               
Cow position:
               
chr29:5064959-5064784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
105-321
               

               
Cow position:
               
chr29:5769989-5769766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
105-532
               

               
Cow position:
               
chr29:16309916-16309515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 28
               

               
Conread position:
               
105-546
               

               
Cow position:
               
chr29:44378212-44378665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
105-553
               

               
Cow position:
               
chr29:1325641-1325187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
106-239
               

               
Cow position:
               
chr29:8841255-8841390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-250
               

               
Cow position:
               
chr29:40112573-40112426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr29:27487373-27487217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr29:42792309-42792157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr29:43313392-43313239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
106-265
               

               
Cow position:
               
chr29:24605090-24604924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-284
               

               
Cow position:
               
chr29:4441011-4441195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
106-285
               

               
Cow position:
               
chr29:4648018-4648200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
106-288
               

               
Cow position:
               
chr29:26539425-26539241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
106-289
               

               
Cow position:
               
chr29:19187220-19187031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr29:3293137-3292945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr29:6636272-6636081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr29:9378829-9378634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr29:36781116-36781307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
106-298
               

               
Cow position:
               
chr29:26631243-26631037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 186
               

               
Conread position:
               
106-308
               

               
Cow position:
               
chr29:15798145-15797939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr29:35259175-35258955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
106-329
               

               
Cow position:
               
chr29:396596-396378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
106-334
               

               
Cow position:
               
chr29:33321543-33321310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 164
               

               
Conread position:
               
106-385
               

               
Cow position:
               
chr29:23812854-23813119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr29:23389372-23389666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
106-432
               

               
Cow position:
               
chr29:30227086-30227407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
106-459
               

               
Cow position:
               
chr29:2056254-2055899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 197
               

               
Conread position:
               
106-493
               

               
Cow position:
               
chr29:28979322-28979676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
211, 29
               

               
Conread position:
               
106-504
               

               
Cow position:
               
chr29:22777987-22778389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
106-505
               

               
Cow position:
               
chr29:5408948-5409352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
106-505
               

               
Cow position:
               
chr29:10153618-10153998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr29:19949499-19949074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr29:23698164-23697743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
106-532
               

               
Cow position:
               
chr29:27816530-27816134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
106-533
               

               
Cow position:
               
chr29:22690421-22689978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 189
               

               
Conread position:
               
106-548
               

               
Cow position:
               
chr29:706781-707194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
271, 27
               

               
Conread position:
               
106-552
               

               
Cow position:
               
chr29:4874696-4875156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
106-552
               

               
Cow position:
               
chr29:5893040-5892594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
106-552
               

               
Cow position:
               
chr29:19756631-19756195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr29:17110147-17109716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr29:17222610-17222154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr29:28195339-28195773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr29:31786868-31786424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
106-553
               

               
Cow position:
               
chr29:34745467-34745908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
106-554
               

               
Cow position:
               
chr29:40891513-40891957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
106-567
               

               
Cow position:
               
chr29:10058349-10058796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
106-568
               

               
Cow position:
               
chr29:20626764-20626307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 189
               

               
Conread position:
               
107-250
               

               
Cow position:
               
chr29:22776269-22776123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
107-293
               

               
Cow position:
               
chr29:40350888-40351074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
107-304
               

               
Cow position:
               
chr29:629730-629527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
107-333
               

               
Cow position:
               
chr29:36357321-36357090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
107-513
               

               
Cow position:
               
chr29:31489517-31489103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 209
               

               
Conread position:
               
107-537
               

               
Cow position:
               
chr29:11916014-11915576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr29:18878289-18878755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr29:21592891-21592450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
107-553
               

               
Cow position:
               
chr29:28775273-28775708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
107-575
               

               
Cow position:
               
chr29:40117758-40117296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
108-568
               

               
Cow position:
               
chr29:21443149-21443614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
110-233
               

               
Cow position:
               
chr29:9149360-9149477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
110-265
               

               
Cow position:
               
chr29:3192732-3192887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
110-320
               

               
Cow position:
               
chr29:1011403-1011606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
110-412
               

               
Cow position:
               
chr29:40994689-40995001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
110-484
               

               
Cow position:
               
chr29:22028771-22029122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
110-539
               

               
Cow position:
               
chr29:22714520-22714970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
110-547
               

               
Cow position:
               
chr29:22895898-22895468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
110-553
               

               
Cow position:
               
chr29:43328822-43328383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
110-567
               

               
Cow position:
               
chr29:35501475-35501917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
111-320
               

               
Cow position:
               
chr29:15947358-15947141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr29:27911781-27911527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
111-439
               

               
Cow position:
               
chr29:18462365-18462696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
111-511
               

               
Cow position:
               
chr29:30441128-30440711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 118
               

               
Conread position:
               
111-514
               

               
Cow position:
               
chr29:1395761-1395388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 22
               

               
Conread position:
               
111-552
               

               
Cow position:
               
chr29:22068552-22069000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
112-408
               

               
Cow position:
               
chr29:5046841-5046545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
112-444
               

               
Cow position:
               
chr29:35084035-35084369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
112-553
               

               
Cow position:
               
chr29:14501783-14501340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 219
               

               
Conread position:
               
113-285
               

               
Cow position:
               
chr29:23142145-23142325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 177
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr29:23913210-23913388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 98
               

               
Conread position:
               
113-320
               

               
Cow position:
               
chr29:40791484-40791284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
113-427
               

               
Cow position:
               
chr29:34358792-34359109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
113-531
               

               
Cow position:
               
chr29:34744444-34744851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
113-552
               

               
Cow position:
               
chr29:20933902-20933452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
113-552
               

               
Cow position:
               
chr29:32655256-32655677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
113-554
               

               
Cow position:
               
chr29:35405603-35406049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
113-558
               

               
Cow position:
               
chr29:7955801-7956243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
114-283
               

               
Cow position:
               
chr29:8798824-8799004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
114-297
               

               
Cow position:
               
chr29:7290955-7290773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
116-301
               

               
Cow position:
               
chr29:24365713-24365903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr29:43544421-43544643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 174
               

               
Conread position:
               
116-556
               

               
Cow position:
               
chr29:36632676-36633091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
116-570
               

               
Cow position:
               
chr29:31926133-31926560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
117-553
               

               
Cow position:
               
chr29:6844456-6844883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
119-297
               

               
Cow position:
               
chr29:2135347-2135520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr29:22723777-22723576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
119-368
               

               
Cow position:
               
chr29:23825031-23825283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 239
               

               
Conread position:
               
119-506
               

               
Cow position:
               
chr29:17154943-17154566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
121-289
               

               
Cow position:
               
chr29:11116484-11116656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
123-261
               

               
Cow position:
               
chr29:28257319-28257174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
123-553
               

               
Cow position:
               
chr29:44236619-44236214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
125-297
               

               
Cow position:
               
chr29:24051205-24051384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
125-514
               

               
Cow position:
               
chr29:5109008-5109428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
125-569
               

               
Cow position:
               
chr29:465223-465671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
128-289
               

               
Cow position:
               
chr29:3590637-3590470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
129-336
               

               
Cow position:
               
chr29:32733463-32733258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
129-474
               

               
Cow position:
               
chr29:12900380-12900724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
133-392
               

               
Cow position:
               
chr29:30713551-30713800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
133-474
               

               
Cow position:
               
chr29:44988638-44988954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
274, 46
               

               
Conread position:
               
138-263
               

               
Cow position:
               
chr29:40889518-40889648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
139-532
               

               
Cow position:
               
chr29:23577624-23578011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
142-284
               

               
Cow position:
               
chr29:5653099-5652950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
145-263
               

               
Cow position:
               
chr29:17051862-17051977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
145-301
               

               
Cow position:
               
chr29:32301900-32301743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
146-473
               

               
Cow position:
               
chr29:31891383-31891698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
147-553
               

               
Cow position:
               
chr29:24603991-24604402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
224, 21
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr29:478252-477826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
150-542
               

               
Cow position:
               
chr29:7966394-7966000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 172
               

               
Conread position:
               
154-554
               

               
Cow position:
               
chr29:1557074-1556677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
156-273
               

               
Cow position:
               
chr29:8031548-8031434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
156-529
               

               
Cow position:
               
chr29:29512004-29512370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
215, 23
               

               
Conread position:
               
157-263
               

               
Cow position:
               
chr29:30455946-30455836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
158-263
               

               
Cow position:
               
chr29:36960477-36960368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
158-507
               

               
Cow position:
               
chr29:11053723-11054065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
164-553
               

               
Cow position:
               
chr29:17966092-17965703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
166-572
               

               
Cow position:
               
chr29:12451504-12451097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
167-324
               

               
Cow position:
               
chr29:13373429-13373267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
167-370
               

               
Cow position:
               
chr29:7103686-7103491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
167-428
               

               
Cow position:
               
chr29:2262869-2263127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
205, 12
               

               
Conread position:
               
167-461
               

               
Cow position:
               
chr29:23243750-23244043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
167-470
               

               
Cow position:
               
chr29:24252357-24252066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
167-497
               

               
Cow position:
               
chr29:1022423-1022089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr29:26653917-26654248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
220, 116
               

               
Conread position:
               
167-507
               

               
Cow position:
               
chr29:38581106-38580765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 89
               

               
Conread position:
               
167-515
               

               
Cow position:
               
chr29:40097090-40096738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
167-527
               

               
Cow position:
               
chr29:40298896-40299243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
167-553
               

               
Cow position:
               
chr29:12310136-12309743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
167-554
               

               
Cow position:
               
chr29:45005499-45005871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
167-566
               

               
Cow position:
               
chr29:12783837-12784222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 68
               

               
Conread position:
               
167-569
               

               
Cow position:
               
chr29:749783-750167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 12
               

               
Conread position:
               
167-569
               

               
Cow position:
               
chr29:40853056-40852668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
167-575
               

               
Cow position:
               
chr29:25088870-25088476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 91
               

               
Conread position:
               
168-297
               

               
Cow position:
               
chr29:1220004-1220134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
168-370
               

               
Cow position:
               
chr29:13867084-13867276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
168-421
               

               
Cow position:
               
chr29:5210616-5210374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
234, 11
               

               
Conread position:
               
168-455
               

               
Cow position:
               
chr29:11647221-11646940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
168-475
               

               
Cow position:
               
chr29:28166097-28166391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
209, 11
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr29:10156179-10156543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
168-553
               

               
Cow position:
               
chr29:32290737-32290348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
168-575
               

               
Cow position:
               
chr29:25333336-25333729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 11
               

               
Conread position:
               
169-537
               

               
Cow position:
               
chr29:6286035-6286398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
171-282
               

               
Cow position:
               
chr29:33393802-33393690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
171-417
               

               
Cow position:
               
chr29:42886666-42886440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
171-489
               

               
Cow position:
               
chr29:6870641-6870977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
171-497
               

               
Cow position:
               
chr29:39329479-39329797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
171-569
               

               
Cow position:
               
chr29:6015247-6014834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
172-288
               

               
Cow position:
               
chr29:19059960-19060076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
172-293
               

               
Cow position:
               
chr29:34760294-34760412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
172-295
               

               
Cow position:
               
chr29:16672612-16672490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
172-370
               

               
Cow position:
               
chr29:22519004-22519194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
172-387
               

               
Cow position:
               
chr29:32926225-32926015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
172-399
               

               
Cow position:
               
chr29:847519-847739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
172-453
               

               
Cow position:
               
chr29:29314537-29314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
172-553
               

               
Cow position:
               
chr29:7665895-7666283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
173-553
               

               
Cow position:
               
chr29:8926341-8926713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
173-553
               

               
Cow position:
               
chr29:19339123-19338725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
173-567
               

               
Cow position:
               
chr29:6293359-6293736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
202, 29
               

               
Conread position:
               
173-571
               

               
Cow position:
               
chr29:39567802-39567417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 26
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr29:13615535-13615897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
183, 28
               

               
Conread position:
               
174-569
               

               
Cow position:
               
chr29:18963854-18963471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
177-553
               

               
Cow position:
               
chr29:22936389-22936027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
179-474
               

               
Cow position:
               
chr29:25923847-25924144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 30
               

               
Conread position:
               
179-542
               

               
Cow position:
               
chr29:9937968-9938314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
293, 35
               

               
Conread position:
               
179-553
               

               
Cow position:
               
chr29:13554251-13553878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
179-553
               

               
Cow position:
               
chr29:15940522-15940892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 18
               

               
Conread position:
               
179-572
               

               
Cow position:
               
chr29:11005850-11005437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
192, 128
               

               
Conread position:
               
180-497
               

               
Cow position:
               
chr29:26985340-26985024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
205, 31
               

               
Conread position:
               
180-545
               

               
Cow position:
               
chr29:10235024-10235361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
197, 11
               

               
Conread position:
               
180-553
               

               
Cow position:
               
chr29:20428852-20429227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
207, 12
               

               
Conread position:
               
180-556
               

               
Cow position:
               
chr29:9912289-9911920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 27
               

               
Conread position:
               
181-454
               

               
Cow position:
               
chr29:7663157-7663426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
181-474
               

               
Cow position:
               
chr29:5186380-5186671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
196, 134
               

               
Conread position:
               
181-483
               

               
Cow position:
               
chr29:4334831-4334541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
187, 82
               

               
Conread position:
               
181-514
               

               
Cow position:
               
chr29:463539-463871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
181-539
               

               
Cow position:
               
chr29:26987039-26986703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
181-553
               

               
Cow position:
               
chr29:86899-87271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 24
               

               
Conread position:
               
181-575
               

               
Cow position:
               
chr29:11397814-11398194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
182-297
               

               
Cow position:
               
chr29:19244347-19244462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-373
               

               
Cow position:
               
chr29:4691276-4691460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
182-417
               

               
Cow position:
               
chr29:4444830-4444599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
196, 125
               

               
Conread position:
               
182-532
               

               
Cow position:
               
chr29:37960864-37961213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr29:356433-356072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 145
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr29:4367838-4367467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 126
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr29:13127008-13127362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr29:17543555-17543196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
182-554
               

               
Cow position:
               
chr29:29302546-29302909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
182-571
               

               
Cow position:
               
chr29:40337430-40337797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
182-575
               

               
Cow position:
               
chr29:9512372-9511955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
154, 126
               

               
Conread position:
               
182-576
               

               
Cow position:
               
chr29:26615605-26616003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 150
               

               
Conread position:
               
183-297
               

               
Cow position:
               
chr29:27688627-27688741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-376
               

               
Cow position:
               
chr29:8004816-8004993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr29:43594737-43594975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
183-474
               

               
Cow position:
               
chr29:16055020-16055311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 28
               

               
Conread position:
               
183-529
               

               
Cow position:
               
chr29:43496151-43495827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
183-552
               

               
Cow position:
               
chr29:41811479-41811830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
189, 79
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr29:5947695-5948041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
289, 49
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr29:13372774-13372409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
189, 22
               

               
Conread position:
               
183-553
               

               
Cow position:
               
chr29:36217223-36216864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 78
               

               
Conread position:
               
183-556
               

               
Cow position:
               
chr29:16195951-16195595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 88
               

               
Conread position:
               
183-566
               

               
Cow position:
               
chr29:18695362-18694991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 22
               

               
Conread position:
               
183-573
               

               
Cow position:
               
chr29:650385-649999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr29:6217434-6217825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
195, 58
               

               
Conread position:
               
184-297
               

               
Cow position:
               
chr29:37046591-37046704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
184-456
               

               
Cow position:
               
chr29:26416460-26416202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
229, 7
               

               
Conread position:
               
184-488
               

               
Cow position:
               
chr29:32210961-32211251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
186, 74
               

               
Conread position:
               
184-542
               

               
Cow position:
               
chr29:17409445-17409086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
187, 138
               

               
Conread position:
               
184-553
               

               
Cow position:
               
chr29:34699733-34700069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
288, 21
               

               
Conread position:
               
185-339
               

               
Cow position:
               
chr29:19558910-19559063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
186-418
               

               
Cow position:
               
chr29:27873709-27873488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 121
               

               
Conread position:
               
186-514
               

               
Cow position:
               
chr29:1229715-1229391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 120
               

               
Conread position:
               
186-553
               

               
Cow position:
               
chr29:26330306-26329964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
192, 33
               

               
Conread position:
               
190-308
               

               
Cow position:
               
chr29:24746973-24746857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
190-449
               

               
Cow position:
               
chr29:44008681-44008933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 52
               

               
Conread position:
               
191-336
               

               
Cow position:
               
chr29:30918652-30918507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
192-523
               

               
Cow position:
               
chr29:19821385-19821070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
183, 69
               

               
Conread position:
               
195-514
               

               
Cow position:
               
chr29:28446157-28446477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
195-553
               

               
Cow position:
               
chr29:28868742-28868377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
195-573
               

               
Cow position:
               
chr29:2984989-2984612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
186, 73
               

               
Conread position:
               
197-547
               

               
Cow position:
               
chr29:23983858-23984212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
199-574
               

               
Cow position:
               
chr29:32521965-32521593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
201-532
               

               
Cow position:
               
chr29:26263929-26263616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
212, 109
               

               
Conread position:
               
204-504
               

               
Cow position:
               
chr29:41365199-41364902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 44
               

               
Conread position:
               
204-553
               

               
Cow position:
               
chr29:37785083-37785433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
205-515
               

               
Cow position:
               
chr29:868864-868554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
172, 118
               

               
Conread position:
               
208-539
               

               
Cow position:
               
chr29:17339219-17339541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr29:4051907-4052131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
210-548
               

               
Cow position:
               
chr29:16359705-16359364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
210-568
               

               
Cow position:
               
chr29:9139500-9139138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
215-532
               

               
Cow position:
               
chr29:17668566-17668260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 50
               

               
Conread position:
               
215-567
               

               
Cow position:
               
chr29:17033-17374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 20
               

               
Conread position:
               
219-532
               

               
Cow position:
               
chr29:24103466-24103784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr29:40166319-40165966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
166, 110
               

               
Conread position:
               
228-532
               

               
Cow position:
               
chr29:36183347-36183040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
143, 94
               

               
Conread position:
               
228-550
               

               
Cow position:
               
chr29:2071505-2071819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
230-567
               

               
Cow position:
               
chr29:45624192-45624536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
232-553
               

               
Cow position:
               
chr29:26771501-26771187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
235-553
               

               
Cow position:
               
chr29:18211939-18212236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 27
               

               
Conread position:
               
236-554
               

               
Cow position:
               
chr29:3704140-3704458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 90
               

               
Conread position:
               
237-444
               

               
Cow position:
               
chr29:17301591-17301383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
244-515
               

               
Cow position:
               
chr29:41747498-41747222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 81
               

               
Conread position:
               
249-574
               

               
Cow position:
               
chr29:21534627-21534958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
253-512
               

               
Cow position:
               
chr29:14484496-14484761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
256-552
               

               
Cow position:
               
chr29:14036677-14036964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
267-515
               

               
Cow position:
               
chr29:39643203-39642958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
269-462
               

               
Cow position:
               
chr29:45384152-45383960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
271-553
               

               
Cow position:
               
chr29:4805267-4804979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
271-575
               

               
Cow position:
               
chr29:9685970-9686278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
285-566
               

               
Cow position:
               
chr29:4194097-4194388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
303-553
               

               
Cow position:
               
chr29:35281497-35281249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
315-539
               

               
Cow position:
               
chr29:19508944-19508718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
316-552
               

               
Cow position:
               
chr29:11684995-11684759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
317-496
               

               
Cow position:
               
chr29:3100268-3100461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
318-577
               

               
Cow position:
               
chr29:34736479-34736743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
319-554
               

               
Cow position:
               
chr29:22957358-22957589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
324-553
               

               
Cow position:
               
chr29:35630429-35630670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
326-551
               

               
Cow position:
               
chr29:29975022-29974789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
327-551
               

               
Cow position:
               
chr29:21000622-21000389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
327-552
               

               
Cow position:
               
chr29:23743075-23743290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
327-553
               

               
Cow position:
               
chr29:26130762-26130529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
328-504
               

               
Cow position:
               
chr29:709142-709330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
328-553
               

               
Cow position:
               
chr29:26735005-26734779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
328-569
               

               
Cow position:
               
chr29:603343-603579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
328-569
               

               
Cow position:
               
chr29:18338561-18338817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 221
               

               
Conread position:
               
328-575
               

               
Cow position:
               
chr29:42268671-42268416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
329-465
               

               
Cow position:
               
chr29:25432376-25432236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
329-553
               

               
Cow position:
               
chr29:94577-94799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
330-517
               

               
Cow position:
               
chr29:2533035-2532841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr29:585251-585029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
330-569
               

               
Cow position:
               
chr29:35636403-35636155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 215
               

               
Conread position:
               
331-554
               

               
Cow position:
               
chr29:3822814-3822596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
331-567
               

               
Cow position:
               
chr29:3396080-3395841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
333-553
               

               
Cow position:
               
chr29:7040871-7041089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
333-563
               

               
Cow position:
               
chr29:21237090-21236851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 154
               

               
Conread position:
               
333-575
               

               
Cow position:
               
chr29:2522542-2522301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
333-575
               

               
Cow position:
               
chr29:20178157-20178399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
334-513
               

               
Cow position:
               
chr29:36037672-36037483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
334-552
               

               
Cow position:
               
chr29:16757030-16756802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
334-553
               

               
Cow position:
               
chr29:12798891-12798676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 98
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr29:34359834-34360048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
335-553
               

               
Cow position:
               
chr29:35738300-35738524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr29:4066055-4065811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
337-551
               

               
Cow position:
               
chr29:7407919-7408141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 206
               

               
Conread position:
               
337-553
               

               
Cow position:
               
chr29:15944537-15944315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
337-553
               

               
Cow position:
               
chr29:18748625-18748838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
337-556
               

               
Cow position:
               
chr29:5919355-5919582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
338-552
               

               
Cow position:
               
chr29:15758397-15758183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
343-552
               

               
Cow position:
               
chr29:24345488-24345717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 209
               

               
Conread position:
               
350-553
               

               
Cow position:
               
chr29:21925166-21924956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 192
               

               
Conread position:
               
350-571
               

               
Cow position:
               
chr29:36404778-36404550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
10, 189
               

               
Conread position:
               
354-553
               

               
Cow position:
               
chr29:35434819-35434616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
362-568
               

               
Cow position:
               
chr29:295882-296087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
374-532
               

               
Cow position:
               
chr29:42939431-42939588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
378-576
               

               
Cow position:
               
chr29:21265656-21265461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 157
               

               
Conread position:
               
380-571
               

               
Cow position:
               
chr29:22948738-22948932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 160
               

               
Conread position:
               
381-575
               

               
Cow position:
               
chr29:28280614-28280807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
383-575
               

               
Cow position:
               
chr29:16083044-16082853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
384-532
               

               
Cow position:
               
chr29:13458976-13458823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
384-551
               

               
Cow position:
               
chr29:32308405-32308576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 155
               

               
Conread position:
               
385-553
               

               
Cow position:
               
chr29:40902804-40902973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 141
               

               
Conread position:
               
400-553
               

               
Cow position:
               
chr29:29066327-29066172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
401-567
               

               
Cow position:
               
chr29:22721028-22720859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
402-553
               

               
Cow position:
               
chr29:134093-133938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
411-553
               

               
Cow position:
               
chr29:21665857-21665716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 123
               

               
Conread position:
               
412-553
               

               
Cow position:
               
chr29:29632047-29632191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
415-571
               

               
Cow position:
               
chr29:45588590-45588744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
54, 119
               
Show alignments to all cow chromosomes.