Cow genome map
| Conread name: | Pig2-112N02 |
| Conread position: | 1-124 |
| Cow position: | chr3:67021573-67021696 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-132 |
| Cow position: | chr3:37009313-37009445 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-132 |
| Cow position: | chr3:61242815-61242680 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-133 |
| Cow position: | chr3:13115044-13115177 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-134 |
| Cow position: | chr3:13085112-13085244 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-142 |
| Cow position: | chr3:43528969-43529114 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-157 |
| Cow position: | chr3:36571003-36571162 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 1-164 |
| Cow position: | chr3:21303160-21303322 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 139, 32 |
| Conread position: | 1-164 |
| Cow position: | chr3:32403368-32403201 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-168 |
| Cow position: | chr3:45700098-45699927 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-180 |
| Cow position: | chr3:77366274-77366457 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-183 |
| Cow position: | chr3:48599961-48599785 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-191 |
| Cow position: | chr3:72776527-72776337 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 151, 163 |
| Conread position: | 1-200 |
| Cow position: | chr3:16332857-16332650 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 128 |
| Conread position: | 1-200 |
| Cow position: | chr3:60891696-60891491 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 26, 196 |
| Conread position: | 1-201 |
| Cow position: | chr3:40101427-40101628 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 1-205 |
| Cow position: | chr3:7856854-7856647 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 1-206 |
| Cow position: | chr3:18184344-18184138 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 1-206 |
| Cow position: | chr3:31933905-31934114 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-206 |
| Cow position: | chr3:49999568-49999359 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-206 |
| Cow position: | chr3:63202666-63202461 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 1-212 |
| Cow position: | chr3:35854138-35854351 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 78 |
| Conread position: | 1-215 |
| Cow position: | chr3:22918951-22918737 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-215 |
| Cow position: | chr3:53387687-53387897 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 118 |
| Conread position: | 1-225 |
| Cow position: | chr3:4031180-4030947 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 58 |
| Conread position: | 1-226 |
| Cow position: | chr3:19794664-19794888 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-226 |
| Cow position: | chr3:29282193-29281963 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-226 |
| Cow position: | chr3:33254430-33254658 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 1-226 |
| Cow position: | chr3:49388082-49387852 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 1-226 |
| Cow position: | chr3:60932698-60932470 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 1-230 |
| Cow position: | chr3:37982933-37983166 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-233 |
| Cow position: | chr3:18886890-18886654 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-247 |
| Cow position: | chr3:54877087-54876847 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-268 |
| Cow position: | chr3:29391693-29391957 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 202 |
| Conread position: | 2-244 |
| Cow position: | chr3:64281893-64282131 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 208, 132 |
| Conread position: | 4-205 |
| Cow position: | chr3:77467134-77466935 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 7-226 |
| Cow position: | chr3:24638828-24638620 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 11-226 |
| Cow position: | chr3:46006514-46006306 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 23-226 |
| Cow position: | chr3:49732391-49732592 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 64-226 |
| Cow position: | chr3:22724405-22724568 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 101 |
Show alignments to all cow chromosomes.