Cow genome map
| Conread name: | Pig2-112N02 |
| Conread position: | 1-130 |
| Cow position: | chrX:3569365-3569232 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-131 |
| Cow position: | chrX:35408948-35408816 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 1-169 |
| Cow position: | chrX:5639623-5639784 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-204 |
| Cow position: | chrX:34442128-34442335 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-206 |
| Cow position: | chrX:19929748-19929538 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-206 |
| Cow position: | chrX:23969668-23969459 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 1-208 |
| Cow position: | chrX:18244295-18244088 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-208 |
| Cow position: | chrX:28156849-28156635 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 1-210 |
| Cow position: | chrX:44901447-44901242 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 1-213 |
| Cow position: | chrX:26447393-26447184 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 1-222 |
| Cow position: | chrX:2479313-2479539 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-225 |
| Cow position: | chrX:16526104-16525876 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-225 |
| Cow position: | chrX:21255089-21254865 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-226 |
| Cow position: | chrX:150786-150557 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 1-226 |
| Cow position: | chrX:3649509-3649734 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 1-226 |
| Cow position: | chrX:10866556-10866776 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 177 |
| Conread position: | 1-226 |
| Cow position: | chrX:13405976-13406201 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 1-226 |
| Cow position: | chrX:14162506-14162277 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-226 |
| Cow position: | chrX:23317098-23317324 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 160 |
| Conread position: | 1-226 |
| Cow position: | chrX:29849315-29849538 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 1-233 |
| Cow position: | chrX:21063785-21063551 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 1-254 |
| Cow position: | chrX:21662350-21662100 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 2-205 |
| Cow position: | chrX:2324020-2323813 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 2-206 |
| Cow position: | chrX:20801094-20800894 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 127 |
| Conread position: | 2-208 |
| Cow position: | chrX:40070297-40070506 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 197 |
| Conread position: | 2-226 |
| Cow position: | chrX:25451637-25451423 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 5-226 |
| Cow position: | chrX:29912649-29912424 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-226 |
| Cow position: | chrX:32063861-32064083 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 7-226 |
| Cow position: | chrX:8144577-8144793 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
Show alignments to all cow chromosomes.