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Cow genome map

           
Conread name:
           
Pig2-114C12
        

               
Conread position:
               
230-486
               

               
Cow position:
               
chr18:49841179-49841438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
181, 51
               

               
Conread position:
               
232-507
               

               
Cow position:
               
chr18:33896527-33896238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 245
               

               
Conread position:
               
235-492
               

               
Cow position:
               
chr18:49015031-49015277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
235-493
               

               
Cow position:
               
chr18:42479682-42479418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
176, 25
               

               
Conread position:
               
235-514
               

               
Cow position:
               
chr18:26938885-26939154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
274, 25
               

               
Conread position:
               
235-515
               

               
Cow position:
               
chr18:44262532-44262803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
247-493
               

               
Cow position:
               
chr18:10891427-10891673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
254-493
               

               
Cow position:
               
chr18:12023715-12023477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
255-493
               

               
Cow position:
               
chr18:5647734-5647970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr18:4489982-4489738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
256-424
               

               
Cow position:
               
chr18:28923927-28923757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
256-493
               

               
Cow position:
               
chr18:17391072-17390828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
257-478
               

               
Cow position:
               
chr18:29356702-29356486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
257-489
               

               
Cow position:
               
chr18:10576027-10576261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 153
               

               
Conread position:
               
257-493
               

               
Cow position:
               
chr18:49038384-49038616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
163, 207
               

               
Conread position:
               
257-509
               

               
Cow position:
               
chr18:4884595-4884341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
257-515
               

               
Cow position:
               
chr18:4495964-4495706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 198
               

               
Conread position:
               
258-438
               

               
Cow position:
               
chr18:23505255-23505433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
258-493
               

               
Cow position:
               
chr18:9089622-9089853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
259-493
               

               
Cow position:
               
chr18:10954392-10954626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
164, 99
               

               
Conread position:
               
259-495
               

               
Cow position:
               
chr18:31082425-31082179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
259-512
               

               
Cow position:
               
chr18:14225316-14225569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
259-515
               

               
Cow position:
               
chr18:20641572-20641320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
260-429
               

               
Cow position:
               
chr18:30794351-30794519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
260-486
               

               
Cow position:
               
chr18:45903969-45903741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
157, 80
               

               
Conread position:
               
260-489
               

               
Cow position:
               
chr18:31711639-31711419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
260-492
               

               
Cow position:
               
chr18:12242201-12242438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr18:11691484-11691244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr18:12113436-12113206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
164, 23
               

               
Conread position:
               
260-494
               

               
Cow position:
               
chr18:8171159-8170928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
260-503
               

               
Cow position:
               
chr18:32252243-32251993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
260-506
               

               
Cow position:
               
chr18:9040780-9040530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
260-507
               

               
Cow position:
               
chr18:6310009-6310256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
260-511
               

               
Cow position:
               
chr18:10904774-10905025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 236
               

               
Conread position:
               
260-513
               

               
Cow position:
               
chr18:42431686-42431432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
187, 158
               

               
Conread position:
               
260-513
               

               
Cow position:
               
chr18:48713476-48713724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
260-514
               

               
Cow position:
               
chr18:20126230-20126474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr18:10977286-10977032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr18:11779580-11779804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
167, 14
               

               
Conread position:
               
261-488
               

               
Cow position:
               
chr18:47511931-47512150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 145
               

               
Conread position:
               
261-492
               

               
Cow position:
               
chr18:2146654-2146431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr18:1954662-1954418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr18:22790160-22789928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr18:49100443-49100223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
14, 152
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr18:50359257-50359487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
261-510
               

               
Cow position:
               
chr18:49017431-49017661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
261-511
               

               
Cow position:
               
chr18:56181535-56181278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 118
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr18:9557906-9558148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
262-430
               

               
Cow position:
               
chr18:47705162-47705329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
262-483
               

               
Cow position:
               
chr18:39623728-39623956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
158, 14
               

               
Conread position:
               
262-489
               

               
Cow position:
               
chr18:32189583-32189359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
262-515
               

               
Cow position:
               
chr18:51594877-51594636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
263-493
               

               
Cow position:
               
chr18:29648713-29648942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
157, 13
               

               
Conread position:
               
263-505
               

               
Cow position:
               
chr18:15517242-15517000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
263-518
               

               
Cow position:
               
chr18:3211806-3212067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
264-494
               

               
Cow position:
               
chr18:47548058-47547819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 121
               

               
Conread position:
               
264-512
               

               
Cow position:
               
chr18:28657982-28657739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
264-516
               

               
Cow position:
               
chr18:50095470-50095224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
265-487
               

               
Cow position:
               
chr18:51643433-51643213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
265-489
               

               
Cow position:
               
chr18:38937754-38937978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
265-493
               

               
Cow position:
               
chr18:31557227-31556995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 10
               

               
Conread position:
               
266-475
               

               
Cow position:
               
chr18:34834429-34834640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
266-483
               

               
Cow position:
               
chr18:11183872-11184091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
266-489
               

               
Cow position:
               
chr18:1399419-1399194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 63
               

               
Conread position:
               
266-493
               

               
Cow position:
               
chr18:18592404-18592626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
266-493
               

               
Cow position:
               
chr18:22180850-22180619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
266-493
               

               
Cow position:
               
chr18:22569134-22568906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
158, 10
               

               
Conread position:
               
266-494
               

               
Cow position:
               
chr18:9974397-9974167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 133
               

               
Conread position:
               
266-507
               

               
Cow position:
               
chr18:37189363-37189117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 234
               

               
Conread position:
               
266-510
               

               
Cow position:
               
chr18:12117919-12117674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
266-512
               

               
Cow position:
               
chr18:1571304-1571058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
164, 58
               

               
Conread position:
               
266-514
               

               
Cow position:
               
chr18:11790856-11791100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
266-515
               

               
Cow position:
               
chr18:42432161-42431909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
266-516
               

               
Cow position:
               
chr18:52251924-52251671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
266-520
               

               
Cow position:
               
chr18:38601954-38601695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
267-460
               

               
Cow position:
               
chr18:8299949-8300154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 94
               

               
Conread position:
               
267-489
               

               
Cow position:
               
chr18:6881421-6881200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
267-489
               

               
Cow position:
               
chr18:38985624-38985849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
267-492
               

               
Cow position:
               
chr18:35367260-35367044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr18:55119804-55120030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
89, 154
               

               
Conread position:
               
267-495
               

               
Cow position:
               
chr18:9066629-9066864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 147
               

               
Conread position:
               
267-515
               

               
Cow position:
               
chr18:7415098-7414851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
267-515
               

               
Cow position:
               
chr18:29958233-29957998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
267-533
               

               
Cow position:
               
chr18:43797021-43796759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
268-485
               

               
Cow position:
               
chr18:25006560-25006352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
268-493
               

               
Cow position:
               
chr18:6470028-6470254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
268-493
               

               
Cow position:
               
chr18:51383462-51383236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
268-502
               

               
Cow position:
               
chr18:30360215-30359972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
268-506
               

               
Cow position:
               
chr18:52413898-52414141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 208
               

               
Conread position:
               
268-509
               

               
Cow position:
               
chr18:7963368-7963595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
268-510
               

               
Cow position:
               
chr18:15613927-15613685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
268-510
               

               
Cow position:
               
chr18:23630671-23630436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
268-515
               

               
Cow position:
               
chr18:18843945-18844194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 86
               

               
Conread position:
               
269-487
               

               
Cow position:
               
chr18:42290392-42290178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
269-487
               

               
Cow position:
               
chr18:42293120-42292906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 7
               

               
Conread position:
               
269-493
               

               
Cow position:
               
chr18:28930702-28930479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
151, 163
               

               
Conread position:
               
270-493
               

               
Cow position:
               
chr18:47824833-47824612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
270-495
               

               
Cow position:
               
chr18:9365855-9366086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
270-504
               

               
Cow position:
               
chr18:36768876-36768641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
271-493
               

               
Cow position:
               
chr18:15809864-15809649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
271-495
               

               
Cow position:
               
chr18:33158879-33159107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
143, 48
               

               
Conread position:
               
272-431
               

               
Cow position:
               
chr18:49324495-49324341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
154, 6
               

               
Conread position:
               
272-503
               

               
Cow position:
               
chr18:28101571-28101806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
274-513
               

               
Cow position:
               
chr18:55505347-55505585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
274-516
               

               
Cow position:
               
chr18:20462756-20462525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
95, 136
               

               
Conread position:
               
274-518
               

               
Cow position:
               
chr18:4626846-4626603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
151, 34
               

               
Conread position:
               
275-493
               

               
Cow position:
               
chr18:9010646-9010867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
278-485
               

               
Cow position:
               
chr18:22516591-22516382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
278-489
               

               
Cow position:
               
chr18:52649404-52649181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
278-509
               

               
Cow position:
               
chr18:46452939-46452704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
278-510
               

               
Cow position:
               
chr18:2773449-2773209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
133, 225
               

               
Conread position:
               
278-510
               

               
Cow position:
               
chr18:2776952-2776712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
132, 225
               

               
Conread position:
               
278-514
               

               
Cow position:
               
chr18:44917701-44917935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
278-515
               

               
Cow position:
               
chr18:48000878-48000644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
279-492
               

               
Cow position:
               
chr18:35535202-35534989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
131, 187
               

               
Conread position:
               
279-501
               

               
Cow position:
               
chr18:3085572-3085337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
287-489
               

               
Cow position:
               
chr18:4152602-4152395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
290-515
               

               
Cow position:
               
chr18:51405951-51405733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 80
               

               
Conread position:
               
291-489
               

               
Cow position:
               
chr18:42427576-42427774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 159
               

               
Conread position:
               
291-492
               

               
Cow position:
               
chr18:19193409-19193211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
291-494
               

               
Cow position:
               
chr18:30341224-30341019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 32
               

               
Conread position:
               
291-501
               

               
Cow position:
               
chr18:30586265-30586066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
291-515
               

               
Cow position:
               
chr18:45558103-45558327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
291-519
               

               
Cow position:
               
chr18:50632486-50632259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 114
               

               
Conread position:
               
291-523
               

               
Cow position:
               
chr18:24719269-24719498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
194, 126
               

               
Conread position:
               
292-493
               

               
Cow position:
               
chr18:9846453-9846257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
292-506
               

               
Cow position:
               
chr18:51192783-51192573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
293-511
               

               
Cow position:
               
chr18:11867295-11867518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
294-491
               

               
Cow position:
               
chr18:40047539-40047344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
295-493
               

               
Cow position:
               
chr18:2794011-2793814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
295-493
               

               
Cow position:
               
chr18:5632228-5632427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr18:15172970-15173175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
297-510
               

               
Cow position:
               
chr18:25598270-25598053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
299-493
               

               
Cow position:
               
chr18:47802126-47801934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
300-510
               

               
Cow position:
               
chr18:41724853-41724635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 174
               

               
Conread position:
               
301-489
               

               
Cow position:
               
chr18:29065417-29065234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
301-493
               

               
Cow position:
               
chr18:35786022-35786215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 142
               

               
Conread position:
               
302-493
               

               
Cow position:
               
chr18:41702804-41702996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
302-494
               

               
Cow position:
               
chr18:48407706-48407895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 139
               

               
Conread position:
               
304-489
               

               
Cow position:
               
chr18:28322626-28322811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 100
               

               
Conread position:
               
306-505
               

               
Cow position:
               
chr18:34444762-34444563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
307-506
               

               
Cow position:
               
chr18:49603071-49602867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
308-493
               

               
Cow position:
               
chr18:11856874-11857058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
313-492
               

               
Cow position:
               
chr18:24022596-24022776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
316-506
               

               
Cow position:
               
chr18:7945179-7945372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
321-482
               

               
Cow position:
               
chr18:47419783-47419946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
324-481
               

               
Cow position:
               
chr18:81961-82119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 144
               

               
Conread position:
               
325-523
               

               
Cow position:
               
chr18:21187296-21187490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
328-484
               

               
Cow position:
               
chr18:306726-306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
328-509
               

               
Cow position:
               
chr18:41025135-41024941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
333-461
               

               
Cow position:
               
chr18:44206086-44205959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
334-485
               

               
Cow position:
               
chr18:50018733-50018588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
336-486
               

               
Cow position:
               
chr18:47096430-47096578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
336-488
               

               
Cow position:
               
chr18:49440842-49441000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
336-489
               

               
Cow position:
               
chr18:17974631-17974782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
336-493
               

               
Cow position:
               
chr18:9596184-9596339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
336-494
               

               
Cow position:
               
chr18:32290713-32290865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
337-496
               

               
Cow position:
               
chr18:44548744-44548581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
337-514
               

               
Cow position:
               
chr18:35857922-35857739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
338-489
               

               
Cow position:
               
chr18:50004702-50004548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
338-492
               

               
Cow position:
               
chr18:3132767-3132612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
338-492
               

               
Cow position:
               
chr18:39972534-39972687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
338-493
               

               
Cow position:
               
chr18:21143960-21143806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
343-493
               

               
Cow position:
               
chr18:17007472-17007322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
361-502
               

               
Cow position:
               
chr18:6102937-6102791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 106
               

               
Conread position:
               
362-492
               

               
Cow position:
               
chr18:6829095-6828960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
362-492
               

               
Cow position:
               
chr18:55722528-55722661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
362-493
               

               
Cow position:
               
chr18:4485626-4485758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
362-493
               

               
Cow position:
               
chr18:50263896-50263768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
362-515
               

               
Cow position:
               
chr18:2553890-2553736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
362-515
               

               
Cow position:
               
chr18:4907174-4907325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
364-516
               

               
Cow position:
               
chr18:41257892-41257734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
365-493
               

               
Cow position:
               
chr18:11814334-11814461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
366-489
               

               
Cow position:
               
chr18:18520770-18520643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
366-492
               

               
Cow position:
               
chr18:30247973-30247844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
374-514
               

               
Cow position:
               
chr18:18722115-18722254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
374-515
               

               
Cow position:
               
chr18:51398294-51398150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 43
               
Show alignments to all cow chromosomes.