Cow genome map

Conread name: Pig2-114C12

Conread position: 235-492
Cow position: chr20:8578229-8578492 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 175, 14

Conread position: 243-507
Cow position: chr20:11751640-11751909 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 8

Conread position: 246-488
Cow position: chr20:25162140-25161898 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 48

Conread position: 256-520
Cow position: chr20:382132-381868 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 28

Conread position: 257-449
Cow position: chr20:22978326-22978519 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 164, 19

Conread position: 257-484
Cow position: chr20:5702723-5702951 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 163, 19

Conread position: 257-492
Cow position: chr20:14620307-14620069 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 167

Conread position: 257-493
Cow position: chr20:398307-398074 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 257-503
Cow position: chr20:12581956-12581708 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 0

Conread position: 257-520
Cow position: chr20:2298787-2298531 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 230, 19

Conread position: 258-510
Cow position: chr20:38089912-38090170 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 152, 243

Conread position: 259-486
Cow position: chr20:2819545-2819779 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 151, 32

Conread position: 259-514
Cow position: chr20:8547068-8547318 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 116, 94

Conread position: 260-457
Cow position: chr20:32463519-32463323 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 63

Conread position: 260-460
Cow position: chr20:12239679-12239481 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 41, 12

Conread position: 260-490
Cow position: chr20:32847346-32847577 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 163, 151

Conread position: 260-493
Cow position: chr20:8556268-8556032 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 33

Conread position: 260-493
Cow position: chr20:10208810-10209045 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 16

Conread position: 260-493
Cow position: chr20:25351403-25351188 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 260-502
Cow position: chr20:28605211-28605453 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 77

Conread position: 260-506
Cow position: chr20:40177247-40177493 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 164, 16

Conread position: 260-515
Cow position: chr20:38514782-38515052 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 151, 16

Conread position: 261-492
Cow position: chr20:7624245-7624022 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 261-493
Cow position: chr20:7738226-7737996 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 150, 13

Conread position: 261-493
Cow position: chr20:22065074-22065299 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 261-493
Cow position: chr20:23846663-23846427 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 261-494
Cow position: chr20:18379381-18379616 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 157, 106

Conread position: 261-515
Cow position: chr20:38818009-38818248 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 33

Conread position: 261-520
Cow position: chr20:35146025-35146280 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 17

Conread position: 262-493
Cow position: chr20:31740215-31739979 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 9

Conread position: 262-507
Cow position: chr20:7426194-7425946 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 17

Conread position: 263-489
Cow position: chr20:15548894-15548658 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 222

Conread position: 263-493
Cow position: chr20:25009627-25009395 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 149, 33

Conread position: 263-496
Cow position: chr20:28441331-28441560 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 199, 148

Conread position: 263-510
Cow position: chr20:16935308-16935051 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 33

Conread position: 263-515
Cow position: chr20:42166774-42166530 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 263-516
Cow position: chr20:7756617-7756378 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 264-486
Cow position: chr20:13752228-13752444 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 155

Conread position: 264-511
Cow position: chr20:6054504-6054251 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 168
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 137, 124

Conread position: 266-417
Cow position: chr20:8912491-8912340 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 10

Conread position: 266-420
Cow position: chr20:38768453-38768301 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 146, 75

Conread position: 266-459
Cow position: chr20:20203226-20203418 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 136, 15

Conread position: 266-486
Cow position: chr20:3255046-3255265 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 123, 12

Conread position: 266-506
Cow position: chr20:13269629-13269865 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 28

Conread position: 266-507
Cow position: chr20:8308027-8308253 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 179, 66

Conread position: 266-510
Cow position: chr20:25953270-25953519 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 125

Conread position: 266-513
Cow position: chr20:23792613-23792851 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 211, 24

Conread position: 266-513
Cow position: chr20:26996538-26996794 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 146, 23

Conread position: 266-514
Cow position: chr20:14806895-14807142 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 266-515
Cow position: chr20:20967329-20967579 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 135, 15

Conread position: 267-494
Cow position: chr20:14980501-14980268 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 137

Conread position: 267-496
Cow position: chr20:3148692-3148922 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 186

Conread position: 267-515
Cow position: chr20:22235313-22235560 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 154

Conread position: 268-493
Cow position: chr20:20158145-20158369 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 143, 0

Conread position: 268-493
Cow position: chr20:33623543-33623321 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 29

Conread position: 268-514
Cow position: chr20:17100372-17100622 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 184, 77

Conread position: 268-517
Cow position: chr20:28982711-28982960 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 162, 70

Conread position: 269-428
Cow position: chr20:9412498-9412656 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 104, 109

Conread position: 269-493
Cow position: chr20:15529870-15530098 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 5, 79

Conread position: 269-503
Cow position: chr20:6240511-6240272 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 97

Conread position: 272-493
Cow position: chr20:7438838-7438619 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 25

Conread position: 272-510
Cow position: chr20:24097014-24097248 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 43, 47

Conread position: 272-510
Cow position: chr20:39398495-39398736 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 139, 6

Conread position: 274-512
Cow position: chr20:12420603-12420363 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 151, 87

Conread position: 275-430
Cow position: chr20:21815577-21815731 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 136, 0

Conread position: 275-489
Cow position: chr20:2204669-2204452 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 134, 102

Conread position: 275-493
Cow position: chr20:15766127-15766354 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 18

Conread position: 278-457
Cow position: chr20:35445084-35444901 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 142, 0

Conread position: 282-520
Cow position: chr20:3564184-3564422 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 146, 10

Conread position: 290-517
Cow position: chr20:24315002-24314776 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 110, 78

Conread position: 291-491
Cow position: chr20:12126272-12126065 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 291-493
Cow position: chr20:36312476-36312273 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 98

Conread position: 291-494
Cow position: chr20:4334498-4334299 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 127

Conread position: 293-492
Cow position: chr20:14879823-14880023 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 294-493
Cow position: chr20:19636141-19635940 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 295-498
Cow position: chr20:19060801-19060601 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 38

Conread position: 296-493
Cow position: chr20:23358454-23358256 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 38

Conread position: 298-470
Cow position: chr20:630564-630738 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 112, 22

Conread position: 299-493
Cow position: chr20:13805357-13805554 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 56, 6

Conread position: 300-512
Cow position: chr20:33532344-33532548 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 117

Conread position: 300-514
Cow position: chr20:26041057-26040838 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 304-514
Cow position: chr20:20590256-20590046 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 107, 180

Conread position: 305-487
Cow position: chr20:19834784-19834599 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 307-513
Cow position: chr20:4931135-4931334 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 104, 12

Conread position: 308-494
Cow position: chr20:27407838-27407656 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 69

Conread position: 316-493
Cow position: chr20:4892062-4891880 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 317-478
Cow position: chr20:31746578-31746413 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 325-520
Cow position: chr20:24491962-24491763 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 16

Conread position: 327-506
Cow position: chr20:16977776-16977587 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 85, 178

Conread position: 329-492
Cow position: chr20:26387531-26387693 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 136

Conread position: 334-515
Cow position: chr20:14490321-14490503 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 143

Conread position: 337-515
Cow position: chr20:27315056-27315236 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 340-492
Cow position: chr20:38061685-38061536 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 357-488
Cow position: chr20:23506033-23506170 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 358-510
Cow position: chr20:11368263-11368109 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 362-493
Cow position: chr20:34881294-34881165 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 104

Conread position: 362-503
Cow position: chr20:10956417-10956557 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 362-511
Cow position: chr20:38701020-38700872 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 362-512
Cow position: chr20:14755737-14755586 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 27

Conread position: 363-517
Cow position: chr20:21169658-21169506 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 132, 55

Conread position: 375-516
Cow position: chr20:38430900-38430759 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 120

Conread position: 381-492
Cow position: chr20:2070010-2069894 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 387-501
Cow position: chr20:1999513-1999630 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 30

Conread position: 398-515
Cow position: chr20:17764977-17764861 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 420-515
Cow position: chr20:1009265-1009173 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.