Cow genome map
| Conread name: | Pig2-114C12 |
| Conread position: | 235-485 |
| Cow position: | chr26:35704339-35704577 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 235-496 |
| Cow position: | chr26:13802068-13802323 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 235-512 |
| Cow position: | chr26:14481598-14481335 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 267, 14 |
| Conread position: | 247-428 |
| Cow position: | chr26:13021182-13021003 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 247-431 |
| Cow position: | chr26:32863705-32863524 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 253-492 |
| Cow position: | chr26:20291724-20291482 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 254-492 |
| Cow position: | chr26:23924816-23925054 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 5, 170 |
| Conread position: | 255-493 |
| Cow position: | chr26:9535489-9535725 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 173, 11 |
| Conread position: | 257-513 |
| Cow position: | chr26:34560196-34559943 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 257-515 |
| Cow position: | chr26:20769823-20770085 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 174, 154 |
| Conread position: | 257-519 |
| Cow position: | chr26:28251124-28251390 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 258-438 |
| Cow position: | chr26:678007-677828 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 259-493 |
| Cow position: | chr26:34724897-34724663 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 260-431 |
| Cow position: | chr26:12964720-12964552 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 260-478 |
| Cow position: | chr26:24240655-24240880 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 151, 76 |
| Conread position: | 260-484 |
| Cow position: | chr26:19446109-19446340 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 150, 56 |
| Conread position: | 260-486 |
| Cow position: | chr26:16783800-16784029 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 260-492 |
| Cow position: | chr26:19636266-19636500 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 154 |
| Conread position: | 260-493 |
| Cow position: | chr26:9491902-9492130 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 260-493 |
| Cow position: | chr26:22892471-22892236 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 260-493 |
| Cow position: | chr26:32565989-32566221 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 163, 21 |
| Conread position: | 260-516 |
| Cow position: | chr26:647748-647490 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 34 |
| Conread position: | 261-493 |
| Cow position: | chr26:5666024-5666252 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 161 |
| Conread position: | 261-493 |
| Cow position: | chr26:19591458-19591690 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 18, 157 |
| Conread position: | 261-507 |
| Cow position: | chr26:7314598-7314854 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 261-509 |
| Cow position: | chr26:25526225-25526471 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 140, 128 |
| Conread position: | 262-431 |
| Cow position: | chr26:14175259-14175428 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-494 |
| Cow position: | chr26:21637061-21636839 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 138 |
| Conread position: | 262-516 |
| Cow position: | chr26:18825310-18825052 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 239 |
| Conread position: | 263-493 |
| Cow position: | chr26:6514819-6515044 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 150 |
| Conread position: | 264-496 |
| Cow position: | chr26:32897889-32897665 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 264-515 |
| Cow position: | chr26:19459670-19459930 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 92 |
| Conread position: | 264-515 |
| Cow position: | chr26:33202093-33201837 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 266-493 |
| Cow position: | chr26:12145137-12144905 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 266-508 |
| Cow position: | chr26:1328875-1328640 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 144, 124 |
| Conread position: | 266-515 |
| Cow position: | chr26:26888152-26887904 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 144, 111 |
| Conread position: | 266-516 |
| Cow position: | chr26:12940381-12940641 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 145, 213 |
| Conread position: | 267-489 |
| Cow position: | chr26:20825133-20824915 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 267-493 |
| Cow position: | chr26:8307546-8307320 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 267-493 |
| Cow position: | chr26:26950468-26950250 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 269-492 |
| Cow position: | chr26:5836836-5836607 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 271-487 |
| Cow position: | chr26:29889525-29889309 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 157, 70 |
| Conread position: | 271-494 |
| Cow position: | chr26:4585224-4584999 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 140, 82 |
| Conread position: | 271-515 |
| Cow position: | chr26:34611195-34610952 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 156 |
| Conread position: | 272-493 |
| Cow position: | chr26:11875233-11875013 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 272-509 |
| Cow position: | chr26:12893440-12893202 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 151, 114 |
| Conread position: | 273-512 |
| Cow position: | chr26:7687257-7687012 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 278-489 |
| Cow position: | chr26:17057671-17057882 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 140 |
| Conread position: | 278-502 |
| Cow position: | chr26:31137471-31137245 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 278-515 |
| Cow position: | chr26:4854538-4854777 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 280-431 |
| Cow position: | chr26:33241884-33242034 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 284-507 |
| Cow position: | chr26:28423286-28423513 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 136, 42 |
| Conread position: | 289-515 |
| Cow position: | chr26:16796202-16795979 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 131, 41 |
| Conread position: | 291-489 |
| Cow position: | chr26:31888739-31888937 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 293-517 |
| Cow position: | chr26:32517448-32517235 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 300-493 |
| Cow position: | chr26:13863019-13862827 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 111, 53 |
| Conread position: | 304-493 |
| Cow position: | chr26:15132656-15132852 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 97 |
| Conread position: | 307-503 |
| Cow position: | chr26:16585457-16585649 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 308-502 |
| Cow position: | chr26:10700878-10700683 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 8 |
| Conread position: | 309-514 |
| Cow position: | chr26:33038199-33037992 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 125, 108 |
| Conread position: | 310-515 |
| Cow position: | chr26:6487766-6487558 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 117, 101 |
| Conread position: | 316-510 |
| Cow position: | chr26:12807269-12807080 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 318-493 |
| Cow position: | chr26:9099499-9099322 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 321-494 |
| Cow position: | chr26:33112350-33112174 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 71, 172 |
| Conread position: | 324-494 |
| Cow position: | chr26:31382359-31382527 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 359-512 |
| Cow position: | chr26:13800584-13800740 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 362-507 |
| Cow position: | chr26:13022539-13022688 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 362-516 |
| Cow position: | chr26:21320023-21320177 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 363-494 |
| Cow position: | chr26:8695063-8694933 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 54 |
| Conread position: | 365-492 |
| Cow position: | chr26:5307196-5307329 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 390-515 |
| Cow position: | chr26:18651750-18651880 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.