Cow genome map
| Conread name: | Pig2-114C12 |
| Conread position: | 233-489 |
| Cow position: | chr28:33884342-33884598 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 235-422 |
| Cow position: | chr28:16246125-16245941 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 235-478 |
| Cow position: | chr28:16211160-16210916 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 235-493 |
| Cow position: | chr28:9285430-9285177 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 186, 31 |
| Conread position: | 235-515 |
| Cow position: | chr28:22345962-22346243 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 243-429 |
| Cow position: | chr28:8022156-8021971 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 108, 116 |
| Conread position: | 247-493 |
| Cow position: | chr28:10589072-10588833 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 29, 142 |
| Conread position: | 247-514 |
| Cow position: | chr28:3445531-3445260 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 253-515 |
| Cow position: | chr28:4834889-4834621 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 254-515 |
| Cow position: | chr28:11866706-11866446 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 147, 21 |
| Conread position: | 256-493 |
| Cow position: | chr28:3411024-3410789 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 114, 16 |
| Conread position: | 256-493 |
| Cow position: | chr28:7132127-7131891 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 99, 37 |
| Conread position: | 256-511 |
| Cow position: | chr28:5193289-5193541 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 256-513 |
| Cow position: | chr28:11828997-11828739 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 257-486 |
| Cow position: | chr28:4045810-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 257-489 |
| Cow position: | chr28:11527298-11527063 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 150, 89 |
| Conread position: | 257-492 |
| Cow position: | chr28:11422853-11422620 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 155, 75 |
| Conread position: | 257-493 |
| Cow position: | chr28:7619189-7618960 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 257-509 |
| Cow position: | chr28:19564268-19564019 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 258-505 |
| Cow position: | chr28:8787502-8787751 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 259-518 |
| Cow position: | chr28:10615984-10615729 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 260-413 |
| Cow position: | chr28:2762158-2762311 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-415 |
| Cow position: | chr28:4438674-4438830 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 260-431 |
| Cow position: | chr28:7498185-7498012 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 260-485 |
| Cow position: | chr28:3914676-3914897 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 155 |
| Conread position: | 260-485 |
| Cow position: | chr28:16346568-16346346 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 158, 89 |
| Conread position: | 260-489 |
| Cow position: | chr28:24966351-24966582 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 260-492 |
| Cow position: | chr28:5437123-5436887 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 260-493 |
| Cow position: | chr28:11426577-11426348 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 260-494 |
| Cow position: | chr28:22813224-22813449 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 260-501 |
| Cow position: | chr28:13474265-13474507 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 156, 25 |
| Conread position: | 260-506 |
| Cow position: | chr28:11079271-11079512 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 260-508 |
| Cow position: | chr28:1099695-1099460 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 241, 30 |
| Conread position: | 260-511 |
| Cow position: | chr28:5074545-5074304 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 260-514 |
| Cow position: | chr28:4884293-4884032 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 260-517 |
| Cow position: | chr28:29989150-29988885 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 16 |
| Conread position: | 260-522 |
| Cow position: | chr28:21844920-21845177 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 261-489 |
| Cow position: | chr28:11884555-11884335 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 261-493 |
| Cow position: | chr28:4016497-4016723 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 261-506 |
| Cow position: | chr28:24082233-24082483 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 261-510 |
| Cow position: | chr28:5630065-5630315 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 138, 15 |
| Conread position: | 261-512 |
| Cow position: | chr28:25128851-25129106 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 147, 84 |
| Conread position: | 261-519 |
| Cow position: | chr28:31841380-31841117 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 261-525 |
| Cow position: | chr28:30937704-30937451 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 262-487 |
| Cow position: | chr28:10964388-10964600 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 262-512 |
| Cow position: | chr28:8140447-8140702 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 149, 208 |
| Conread position: | 262-514 |
| Cow position: | chr28:4070934-4071179 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 263-486 |
| Cow position: | chr28:9684368-9684144 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 263-489 |
| Cow position: | chr28:5684670-5684896 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 152, 33 |
| Conread position: | 263-515 |
| Cow position: | chr28:22332498-22332752 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 147, 15 |
| Conread position: | 263-527 |
| Cow position: | chr28:3492816-3492552 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 167, 13 |
| Conread position: | 264-502 |
| Cow position: | chr28:22308608-22308853 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 144, 125 |
| Conread position: | 264-519 |
| Cow position: | chr28:16919199-16918944 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 11 |
| Conread position: | 265-494 |
| Cow position: | chr28:16370115-16369888 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 152, 183 |
| Conread position: | 266-428 |
| Cow position: | chr28:12070207-12070363 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 144, 36 |
| Conread position: | 266-489 |
| Cow position: | chr28:5204164-5204381 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 266-489 |
| Cow position: | chr28:25056934-25057152 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 266-493 |
| Cow position: | chr28:4185875-4186103 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 266-493 |
| Cow position: | chr28:5254844-5255071 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 12 |
| Conread position: | 266-493 |
| Cow position: | chr28:8347698-8347934 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 266-493 |
| Cow position: | chr28:21008696-21008471 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 266-494 |
| Cow position: | chr28:12991105-12991336 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 49, 151 |
| Conread position: | 266-514 |
| Cow position: | chr28:777644-777897 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 267-448 |
| Cow position: | chr28:25596600-25596778 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 267-477 |
| Cow position: | chr28:3740845-3741053 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 6, 143 |
| Conread position: | 267-485 |
| Cow position: | chr28:4090084-4089867 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 70 |
| Conread position: | 267-485 |
| Cow position: | chr28:26531306-26531089 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 150, 25 |
| Conread position: | 267-493 |
| Cow position: | chr28:3746168-3746397 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 267-494 |
| Cow position: | chr28:4013054-4013284 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 268-432 |
| Cow position: | chr28:2960861-2960695 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 268-493 |
| Cow position: | chr28:6975212-6975434 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 268-493 |
| Cow position: | chr28:10863813-10863600 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 155, 49 |
| Conread position: | 268-493 |
| Cow position: | chr28:21868427-21868657 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 268-508 |
| Cow position: | chr28:11585232-11584991 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 268-515 |
| Cow position: | chr28:11816696-11816462 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 268-515 |
| Cow position: | chr28:20124755-20125000 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 75, 168 |
| Conread position: | 269-492 |
| Cow position: | chr28:2279617-2279403 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 5, 24 |
| Conread position: | 269-510 |
| Cow position: | chr28:19216793-19217028 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 270-493 |
| Cow position: | chr28:9636483-9636257 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 146, 6 |
| Conread position: | 270-493 |
| Cow position: | chr28:11346514-11346289 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 271-492 |
| Cow position: | chr28:9740440-9740657 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 192, 140 |
| Conread position: | 271-493 |
| Cow position: | chr28:4809753-4809970 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 132, 166 |
| Conread position: | 272-464 |
| Cow position: | chr28:10775736-10775540 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 6 |
| Conread position: | 272-489 |
| Cow position: | chr28:5139016-5138803 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 148, 114 |
| Conread position: | 272-489 |
| Cow position: | chr28:7350629-7350846 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 272-493 |
| Cow position: | chr28:17949138-17948917 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 159, 145 |
| Conread position: | 272-493 |
| Cow position: | chr28:22371706-22371475 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 159 |
| Conread position: | 272-506 |
| Cow position: | chr28:4006762-4006994 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 6 |
| Conread position: | 272-511 |
| Cow position: | chr28:11987149-11987381 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 84 |
| Conread position: | 272-511 |
| Cow position: | chr28:12055387-12055619 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 84 |
| Conread position: | 273-493 |
| Cow position: | chr28:3726235-3726008 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 273-493 |
| Cow position: | chr28:29416741-29416525 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 273-515 |
| Cow position: | chr28:9705629-9705881 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 275-494 |
| Cow position: | chr28:6091336-6091557 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 276-489 |
| Cow position: | chr28:4181980-4182197 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 143, 169 |
| Conread position: | 278-430 |
| Cow position: | chr28:6971367-6971214 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 278-492 |
| Cow position: | chr28:11016389-11016603 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 278-493 |
| Cow position: | chr28:24646574-24646783 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 133, 46 |
| Conread position: | 278-494 |
| Cow position: | chr28:32358089-32358305 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 278-495 |
| Cow position: | chr28:8304228-8304444 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 278-515 |
| Cow position: | chr28:4101501-4101733 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 49, 166 |
| Conread position: | 279-483 |
| Cow position: | chr28:2131942-2131752 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 279-520 |
| Cow position: | chr28:17739807-17740051 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 132, 47 |
| Conread position: | 282-493 |
| Cow position: | chr28:29850830-29850622 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 179, 117 |
| Conread position: | 291-482 |
| Cow position: | chr28:4364828-4364637 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 136, 41 |
| Conread position: | 291-485 |
| Cow position: | chr28:16879567-16879760 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 291-487 |
| Cow position: | chr28:14998061-14998258 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 291-492 |
| Cow position: | chr28:12430600-12430804 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 291-493 |
| Cow position: | chr28:5805665-5805862 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 120, 40 |
| Conread position: | 291-493 |
| Cow position: | chr28:8396329-8396525 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 291-506 |
| Cow position: | chr28:3143881-3143673 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 293-493 |
| Cow position: | chr28:30902122-30902321 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 293-510 |
| Cow position: | chr28:19039023-19038801 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 293-511 |
| Cow position: | chr28:15362575-15362795 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 199 |
| Conread position: | 296-510 |
| Cow position: | chr28:4877432-4877215 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 119, 172 |
| Conread position: | 297-492 |
| Cow position: | chr28:7557734-7557528 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 297-493 |
| Cow position: | chr28:4876443-4876638 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 297-511 |
| Cow position: | chr28:21207368-21207162 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 86, 121 |
| Conread position: | 300-493 |
| Cow position: | chr28:24996610-24996418 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 117, 100 |
| Conread position: | 300-494 |
| Cow position: | chr28:2151436-2151239 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 110, 7 |
| Conread position: | 300-513 |
| Cow position: | chr28:19994943-19994724 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 304-493 |
| Cow position: | chr28:10890728-10890542 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 305-509 |
| Cow position: | chr28:9109224-9109425 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 305-510 |
| Cow position: | chr28:16362526-16362324 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 105, 87 |
| Conread position: | 310-493 |
| Cow position: | chr28:8936163-8936348 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 118, 90 |
| Conread position: | 316-488 |
| Cow position: | chr28:2777549-2777725 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 318-493 |
| Cow position: | chr28:11411513-11411339 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 318-509 |
| Cow position: | chr28:7644761-7644960 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 318-513 |
| Cow position: | chr28:5673896-5674091 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 72 |
| Conread position: | 321-510 |
| Cow position: | chr28:3678386-3678576 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 328-513 |
| Cow position: | chr28:26868120-26867931 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 333-517 |
| Cow position: | chr28:10606599-10606412 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 336-489 |
| Cow position: | chr28:11305594-11305439 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 89, 81 |
| Conread position: | 336-493 |
| Cow position: | chr28:10762933-10763088 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 336-505 |
| Cow position: | chr28:26960870-26960702 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 336-506 |
| Cow position: | chr28:8681391-8681226 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 338-483 |
| Cow position: | chr28:4166615-4166765 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 136 |
| Conread position: | 341-492 |
| Cow position: | chr28:4866529-4866379 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 342-520 |
| Cow position: | chr28:32014829-32015018 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 354-513 |
| Cow position: | chr28:17060123-17060281 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 357-494 |
| Cow position: | chr28:13290094-13289956 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 357-520 |
| Cow position: | chr28:27787626-27787790 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 362-485 |
| Cow position: | chr28:5711947-5711819 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 362-493 |
| Cow position: | chr28:4588383-4588514 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 362-493 |
| Cow position: | chr28:24238412-24238284 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 362-504 |
| Cow position: | chr28:3257053-3257200 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 362-514 |
| Cow position: | chr28:7750951-7750802 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 364-513 |
| Cow position: | chr28:16177321-16177471 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 107 |
| Conread position: | 367-511 |
| Cow position: | chr28:10140513-10140369 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 368-492 |
| Cow position: | chr28:4878794-4878665 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 381-516 |
| Cow position: | chr28:9069974-9070111 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 385-492 |
| Cow position: | chr28:1825489-1825599 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 385-516 |
| Cow position: | chr28:4375535-4375401 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.