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Cow genome map

           
Conread name:
           
Pig2-114C12
        

               
Conread position:
               
233-493
               

               
Cow position:
               
chr4:34509767-34510016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
235-492
               

               
Cow position:
               
chr4:38944327-38944073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
235-494
               

               
Cow position:
               
chr4:21064966-21065213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
235-496
               

               
Cow position:
               
chr4:52832088-52831825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
235-509
               

               
Cow position:
               
chr4:66172869-66172592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
235-512
               

               
Cow position:
               
chr4:46566543-46566266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
235-513
               

               
Cow position:
               
chr4:35981924-35982205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
236-513
               

               
Cow position:
               
chr4:47730787-47731076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
247-411
               

               
Cow position:
               
chr4:61478540-61478707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
255-493
               

               
Cow position:
               
chr4:16221929-16221684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
256-493
               

               
Cow position:
               
chr4:53134542-53134784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
257-405
               

               
Cow position:
               
chr4:38952502-38952649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
257-455
               

               
Cow position:
               
chr4:68889613-68889422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
257-478
               

               
Cow position:
               
chr4:19097236-19097463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
166, 81
               

               
Conread position:
               
257-489
               

               
Cow position:
               
chr4:10915892-10915649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
257-489
               

               
Cow position:
               
chr4:13344486-13344719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
257-492
               

               
Cow position:
               
chr4:20027155-20026919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
257-493
               

               
Cow position:
               
chr4:22138270-22138029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
257-494
               

               
Cow position:
               
chr4:46435272-46435522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
257-494
               

               
Cow position:
               
chr4:48485942-48486184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
257-496
               

               
Cow position:
               
chr4:19102935-19102686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
257-501
               

               
Cow position:
               
chr4:34700081-34699849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
257-509
               

               
Cow position:
               
chr4:34641779-34641520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
257-509
               

               
Cow position:
               
chr4:59785269-59785524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
257-510
               

               
Cow position:
               
chr4:48422825-48423072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
257-513
               

               
Cow position:
               
chr4:21391863-21391612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
257-513
               

               
Cow position:
               
chr4:44773093-44772833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
257-514
               

               
Cow position:
               
chr4:40414680-40414420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
153, 245
               

               
Conread position:
               
259-484
               

               
Cow position:
               
chr4:60506225-60506454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
259-502
               

               
Cow position:
               
chr4:19597374-19597136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
260-426
               

               
Cow position:
               
chr4:10851496-10851335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
260-426
               

               
Cow position:
               
chr4:34503244-34503412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
260-458
               

               
Cow position:
               
chr4:63965039-63964839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
260-492
               

               
Cow position:
               
chr4:213965-214196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr4:34022633-34022399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
160, 33
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr4:51728028-51728261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 159
               

               
Conread position:
               
260-502
               

               
Cow position:
               
chr4:21874124-21874374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr4:38935310-38935556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 124
               

               
Conread position:
               
260-510
               

               
Cow position:
               
chr4:19118962-19119224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
260-510
               

               
Cow position:
               
chr4:23847098-23846848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
260-511
               

               
Cow position:
               
chr4:3687873-3688132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
102, 244
               

               
Conread position:
               
260-522
               

               
Cow position:
               
chr4:3340903-3341168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 211
               

               
Conread position:
               
261-488
               

               
Cow position:
               
chr4:4186074-4186299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
261-489
               

               
Cow position:
               
chr4:48152418-48152189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
261-492
               

               
Cow position:
               
chr4:68387747-68387974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
211, 31
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr4:85647-85881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
261-493
               

               
Cow position:
               
chr4:65463547-65463326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr4:8182689-8182429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
15, 222
               

               
Conread position:
               
261-514
               

               
Cow position:
               
chr4:28772117-28771864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
19, 223
               

               
Conread position:
               
262-508
               

               
Cow position:
               
chr4:10558489-10558736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
141, 154
               

               
Conread position:
               
263-493
               

               
Cow position:
               
chr4:3283493-3283267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
200, 148
               

               
Conread position:
               
263-493
               

               
Cow position:
               
chr4:4319197-4318967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
134, 13
               

               
Conread position:
               
263-493
               

               
Cow position:
               
chr4:62472032-62472263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 188
               

               
Conread position:
               
263-506
               

               
Cow position:
               
chr4:42423852-42423608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 223
               

               
Conread position:
               
264-494
               

               
Cow position:
               
chr4:38157133-38156905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
266-428
               

               
Cow position:
               
chr4:42921900-42921740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
266-470
               

               
Cow position:
               
chr4:3268405-3268206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
266-484
               

               
Cow position:
               
chr4:33970946-33970726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 157
               

               
Conread position:
               
266-489
               

               
Cow position:
               
chr4:43740490-43740714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
266-489
               

               
Cow position:
               
chr4:59002182-59001955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
266-493
               

               
Cow position:
               
chr4:20147139-20147372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
266-493
               

               
Cow position:
               
chr4:27530075-27530299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
145, 170
               

               
Conread position:
               
266-505
               

               
Cow position:
               
chr4:60141560-60141327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
166, 50
               

               
Conread position:
               
266-511
               

               
Cow position:
               
chr4:4084497-4084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 160
               

               
Conread position:
               
266-511
               

               
Cow position:
               
chr4:56239902-56239659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
266-515
               

               
Cow position:
               
chr4:18951929-18952187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
266-515
               

               
Cow position:
               
chr4:32693745-32693997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
266-515
               

               
Cow position:
               
chr4:36290581-36290833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
162, 145
               

               
Conread position:
               
266-515
               

               
Cow position:
               
chr4:53126070-53126306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
267-493
               

               
Cow position:
               
chr4:17851295-17851074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
267-493
               

               
Cow position:
               
chr4:68590735-68590956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
268-432
               

               
Cow position:
               
chr4:19323933-19324098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr4:25537506-25537718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
268-489
               

               
Cow position:
               
chr4:60719060-60719275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
268-502
               

               
Cow position:
               
chr4:11969415-11969650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
268-512
               

               
Cow position:
               
chr4:28839581-28839815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
268-515
               

               
Cow position:
               
chr4:61897577-61897344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
268-517
               

               
Cow position:
               
chr4:16513567-16513314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 125
               

               
Conread position:
               
269-493
               

               
Cow position:
               
chr4:4085157-4084921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
269-503
               

               
Cow position:
               
chr4:45077117-45076882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 127
               

               
Conread position:
               
270-493
               

               
Cow position:
               
chr4:26659263-26659487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
270-494
               

               
Cow position:
               
chr4:31136717-31136943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
270-505
               

               
Cow position:
               
chr4:29384270-29384042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
270-514
               

               
Cow position:
               
chr4:38210014-38209768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 241
               

               
Conread position:
               
271-431
               

               
Cow position:
               
chr4:11871960-11871797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
271-487
               

               
Cow position:
               
chr4:19435218-19435430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
271-488
               

               
Cow position:
               
chr4:21531681-21531458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
271-513
               

               
Cow position:
               
chr4:22101302-22101055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
271-516
               

               
Cow position:
               
chr4:25356356-25356120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
272-431
               

               
Cow position:
               
chr4:36744543-36744699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
272-436
               

               
Cow position:
               
chr4:54541675-54541513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
272-455
               

               
Cow position:
               
chr4:23600131-23600318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr4:7571375-7571570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
272-485
               

               
Cow position:
               
chr4:54478955-54478735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
272-502
               

               
Cow position:
               
chr4:3421585-3421820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
272-511
               

               
Cow position:
               
chr4:54927477-54927225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 47
               

               
Conread position:
               
272-513
               

               
Cow position:
               
chr4:59277514-59277267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
272-521
               

               
Cow position:
               
chr4:51851169-51851425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
95, 231
               

               
Conread position:
               
273-492
               

               
Cow position:
               
chr4:1419188-1419410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
273-493
               

               
Cow position:
               
chr4:28701323-28701532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
273-493
               

               
Cow position:
               
chr4:60303051-60302828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
273-514
               

               
Cow position:
               
chr4:19199323-19199075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
274-502
               

               
Cow position:
               
chr4:53208258-53208479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
274-516
               

               
Cow position:
               
chr4:508944-508702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 191
               

               
Conread position:
               
275-492
               

               
Cow position:
               
chr4:36841235-36841447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
151, 66
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr4:386425-386209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
278-492
               

               
Cow position:
               
chr4:5727813-5728017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
79, 112
               

               
Conread position:
               
278-493
               

               
Cow position:
               
chr4:13693703-13693487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
278-493
               

               
Cow position:
               
chr4:17186380-17186161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
278-493
               

               
Cow position:
               
chr4:19578359-19578570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
278-493
               

               
Cow position:
               
chr4:20327740-20327536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
278-493
               

               
Cow position:
               
chr4:37915366-37915151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
278-494
               

               
Cow position:
               
chr4:44854321-44854099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
278-494
               

               
Cow position:
               
chr4:46136719-46136937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr4:22010086-22009865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
278-506
               

               
Cow position:
               
chr4:69497086-69497312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
133, 8
               

               
Conread position:
               
278-513
               

               
Cow position:
               
chr4:47305046-47305288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 111
               

               
Conread position:
               
278-515
               

               
Cow position:
               
chr4:54455373-54455139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 63
               

               
Conread position:
               
278-522
               

               
Cow position:
               
chr4:46404935-46404695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 74
               

               
Conread position:
               
279-493
               

               
Cow position:
               
chr4:65173072-65173289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 131
               

               
Conread position:
               
279-515
               

               
Cow position:
               
chr4:68805982-68806214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
224, 40
               

               
Conread position:
               
281-493
               

               
Cow position:
               
chr4:19333358-19333570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
130, 195
               

               
Conread position:
               
285-493
               

               
Cow position:
               
chr4:21161081-21161292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
285-498
               

               
Cow position:
               
chr4:34983520-34983312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
285-512
               

               
Cow position:
               
chr4:18099085-18098857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
143, 5
               

               
Conread position:
               
286-487
               

               
Cow position:
               
chr4:69305604-69305816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
289-502
               

               
Cow position:
               
chr4:10732203-10732412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
291-481
               

               
Cow position:
               
chr4:26901309-26901497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
291-487
               

               
Cow position:
               
chr4:34653887-34653694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
291-489
               

               
Cow position:
               
chr4:17774368-17774182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
291-492
               

               
Cow position:
               
chr4:33838818-33838617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
291-494
               

               
Cow position:
               
chr4:43916270-43916481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
291-502
               

               
Cow position:
               
chr4:67393073-67393291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 39
               

               
Conread position:
               
291-514
               

               
Cow position:
               
chr4:44903276-44903490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
291-517
               

               
Cow position:
               
chr4:21506974-21506759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
292-493
               

               
Cow position:
               
chr4:69290760-69290554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
293-515
               

               
Cow position:
               
chr4:60527164-60527388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
127, 164
               

               
Conread position:
               
294-493
               

               
Cow position:
               
chr4:61391242-61391048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
294-494
               

               
Cow position:
               
chr4:29318091-29317880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 189
               

               
Conread position:
               
295-492
               

               
Cow position:
               
chr4:34630884-34631093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
295-493
               

               
Cow position:
               
chr4:41907596-41907395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
296-490
               

               
Cow position:
               
chr4:13995374-13995572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
297-515
               

               
Cow position:
               
chr4:31177812-31178032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 120
               

               
Conread position:
               
297-515
               

               
Cow position:
               
chr4:39007495-39007704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
299-503
               

               
Cow position:
               
chr4:32790013-32789819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
301-514
               

               
Cow position:
               
chr4:51083345-51083127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
306-493
               

               
Cow position:
               
chr4:37991589-37991776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
306-494
               

               
Cow position:
               
chr4:32601834-32602014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
306-519
               

               
Cow position:
               
chr4:30769032-30769243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 59
               

               
Conread position:
               
307-515
               

               
Cow position:
               
chr4:56410343-56410554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
308-493
               

               
Cow position:
               
chr4:61887635-61887828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
310-493
               

               
Cow position:
               
chr4:42374155-42373968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
311-488
               

               
Cow position:
               
chr4:19122874-19123052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 155
               

               
Conread position:
               
316-493
               

               
Cow position:
               
chr4:47048124-47048301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
317-515
               

               
Cow position:
               
chr4:3519429-3519628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 100
               

               
Conread position:
               
320-496
               

               
Cow position:
               
chr4:22331135-22331310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
321-493
               

               
Cow position:
               
chr4:33360116-33360280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
321-515
               

               
Cow position:
               
chr4:56395523-56395722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 181
               

               
Conread position:
               
325-515
               

               
Cow position:
               
chr4:23646842-23646661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
325-519
               

               
Cow position:
               
chr4:27656993-27657184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
327-517
               

               
Cow position:
               
chr4:28660533-28660334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
331-505
               

               
Cow position:
               
chr4:39569226-39569395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
332-493
               

               
Cow position:
               
chr4:20153526-20153367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 64
               

               
Conread position:
               
333-493
               

               
Cow position:
               
chr4:12908397-12908556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
336-489
               

               
Cow position:
               
chr4:34919243-34919091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
336-507
               

               
Cow position:
               
chr4:54785902-54785729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
336-515
               

               
Cow position:
               
chr4:25929243-25929416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
337-485
               

               
Cow position:
               
chr4:60621568-60621416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
337-493
               

               
Cow position:
               
chr4:30943982-30944141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
338-493
               

               
Cow position:
               
chr4:28854246-28854089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
341-492
               

               
Cow position:
               
chr4:61524464-61524616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
341-493
               

               
Cow position:
               
chr4:30250239-30250096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
341-502
               

               
Cow position:
               
chr4:38940911-38940746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
345-461
               

               
Cow position:
               
chr4:27425747-27425864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
348-493
               

               
Cow position:
               
chr4:19496947-19496792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
362-514
               

               
Cow position:
               
chr4:62821003-62820849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
362-516
               

               
Cow position:
               
chr4:10786087-10785929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
362-517
               

               
Cow position:
               
chr4:42608791-42608949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 150
               

               
Conread position:
               
363-485
               

               
Cow position:
               
chr4:60678030-60678156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
363-494
               

               
Cow position:
               
chr4:63293513-63293646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
363-508
               

               
Cow position:
               
chr4:59105629-59105483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
364-495
               

               
Cow position:
               
chr4:51026405-51026540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
364-506
               

               
Cow position:
               
chr4:30691058-30691201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
364-514
               

               
Cow position:
               
chr4:22215456-22215306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
364-520
               

               
Cow position:
               
chr4:34544361-34544521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
365-509
               

               
Cow position:
               
chr4:12666086-12666234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
365-510
               

               
Cow position:
               
chr4:36070758-36070906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
368-514
               

               
Cow position:
               
chr4:19328643-19328790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
381-506
               

               
Cow position:
               
chr4:275516-275644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
385-514
               

               
Cow position:
               
chr4:16798896-16798762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.