Cow genome map


           Conread name:
           Pig2-117P05
        

               Conread position:
               1-427
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               5-423
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               44-377
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 190
               

               Conread position:
               85-426
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 153
               

               Conread position:
               123-400
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               123-426
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 228
               

               Conread position:
               123-426
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 138
               

               Conread position:
               130-424
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               142-392
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               150, 21
               

               Conread position:
               161-347
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               187-418
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 79
               

               Conread position:
               190-567
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               343, 323
               

               Conread position:
               191-426
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               74, 54
               

               Conread position:
               191-426
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               191-429
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               192-426
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               192-429
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               192-429
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               197-429
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               205-429
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               88, 57
               

               Conread position:
               211-429
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               211-429
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               212-372
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               125, 135
               

               Conread position:
               212-411
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               212-427
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               162, 52
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               212-429
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 98
               

               Conread position:
               212-430
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               213-429
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               213-429
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               213-429
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               214-426
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               218-423
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               86, 143
               

               Conread position:
               218-429
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               218-429
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               219-429
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               7, 151
               

               Conread position:
               219-429
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               226-424
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               226-426
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               226-426
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               226-426
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               226-426
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               226-429
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               226-429
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               226-429
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 47
               

               Conread position:
               226-429
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               236-426
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               236-426
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               236-429
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               237-426
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               237-426
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               237-426
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               56, 132
               

               Conread position:
               248-429
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               251-546
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               267-426
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               286-426
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-426
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-426
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-560
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               403-560
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               403-561
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               403-561
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               403-561
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               403-561
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               403-562
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               403-569
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               126, 18
               

               Conread position:
               404-567
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               404-567
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               404-567
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               404-567
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               404-567
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               421-556
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               421-561
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               111, 38
               

               Conread position:
               421-562
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               421-562
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               421-564
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               111, 92
               

               Conread position:
               421-567
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               421-567
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               422-560
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               422-562
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 93
               

               Conread position:
               423-562
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               425-562
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               426-554
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 89
               

               Conread position:
               426-561
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               103, 79
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               426-562
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               427-554
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 44
               

               Conread position:
               427-561
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               427-562
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               427-562
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 87
               
Show alignments to all cow chromosomes.