Cow genome map
| Conread name: | Pig2-117P05 |
| Conread position: | 79-429 |
| Cow position: | chr25:12759156-12759510 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 8, 175 |
| Conread position: | 89-426 |
| Cow position: | chr25:33244243-33243919 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 136 |
| Conread position: | 123-424 |
| Cow position: | chr25:18093406-18093113 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 250 |
| Conread position: | 123-426 |
| Cow position: | chr25:11933133-11933437 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 219 |
| Conread position: | 129-392 |
| Cow position: | chr25:18254978-18255240 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 129-426 |
| Cow position: | chr25:23344960-23345247 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 136-429 |
| Cow position: | chr25:19287962-19288249 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 57 |
| Conread position: | 191-425 |
| Cow position: | chr25:9544395-9544156 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 157 |
| Conread position: | 193-426 |
| Cow position: | chr25:36240875-36240648 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 196-426 |
| Cow position: | chr25:33665552-33665780 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 211-429 |
| Cow position: | chr25:17589242-17589459 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 211-429 |
| Cow position: | chr25:18194786-18195009 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 211-429 |
| Cow position: | chr25:19917396-19917173 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 212-426 |
| Cow position: | chr25:8675223-8675008 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 212-426 |
| Cow position: | chr25:18275521-18275741 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 212-426 |
| Cow position: | chr25:18303707-18303493 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 212-429 |
| Cow position: | chr25:14016472-14016254 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 81, 135 |
| Conread position: | 212-429 |
| Cow position: | chr25:17468395-17468609 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 98, 33 |
| Conread position: | 212-429 |
| Cow position: | chr25:18060295-18060509 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 120 |
| Conread position: | 212-429 |
| Cow position: | chr25:34656139-34656356 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 199 |
| Conread position: | 213-347 |
| Cow position: | chr25:6172209-6172074 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 213-426 |
| Cow position: | chr25:34014182-34014394 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 123 |
| Conread position: | 213-429 |
| Cow position: | chr25:35362123-35362340 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 219-425 |
| Cow position: | chr25:27022265-27022473 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 219-429 |
| Cow position: | chr25:11375048-11375259 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 226-426 |
| Cow position: | chr25:12942407-12942608 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-426 |
| Cow position: | chr25:26279552-26279349 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 226-427 |
| Cow position: | chr25:18889722-18889925 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 226-429 |
| Cow position: | chr25:32580258-32580055 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 227-424 |
| Cow position: | chr25:20776610-20776803 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 227-426 |
| Cow position: | chr25:26922508-26922309 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 234-364 |
| Cow position: | chr25:17560347-17560478 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 237-426 |
| Cow position: | chr25:13781312-13781122 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 237-426 |
| Cow position: | chr25:25506931-25506742 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 237-426 |
| Cow position: | chr25:34346735-34346925 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 237-427 |
| Cow position: | chr25:22147777-22147586 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 240-426 |
| Cow position: | chr25:18421950-18421760 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 6, 173 |
| Conread position: | 251-408 |
| Cow position: | chr25:20629834-20629681 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 267-426 |
| Cow position: | chr25:18027373-18027533 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 396-567 |
| Cow position: | chr25:33990992-33991166 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 403-554 |
| Cow position: | chr25:22147554-22147401 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-561 |
| Cow position: | chr25:8674975-8674814 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-561 |
| Cow position: | chr25:12942641-12942803 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 403-561 |
| Cow position: | chr25:18889955-18890117 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-561 |
| Cow position: | chr25:20629637-20629475 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 403-561 |
| Cow position: | chr25:25506710-25506548 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-569 |
| Cow position: | chr25:18173422-18173252 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 53, 18 |
| Conread position: | 404-554 |
| Cow position: | chr25:19917142-19916990 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 404-567 |
| Cow position: | chr25:20776840-20777005 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 404-567 |
| Cow position: | chr25:32580024-32579858 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 404-567 |
| Cow position: | chr25:35362365-35362531 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 421-561 |
| Cow position: | chr25:13781072-13780929 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 421-561 |
| Cow position: | chr25:26279308-26279163 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 421-562 |
| Cow position: | chr25:18275791-18275928 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 421-562 |
| Cow position: | chr25:36240589-36240443 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 426-561 |
| Cow position: | chr25:18060551-18060688 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 426-562 |
| Cow position: | chr25:14016204-14016069 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 426-562 |
| Cow position: | chr25:17468658-17468799 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 426-562 |
| Cow position: | chr25:18027588-18027729 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 426-567 |
| Cow position: | chr25:17589512-17589657 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 427-562 |
| Cow position: | chr25:34656408-34656548 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 428-562 |
| Cow position: | chr25:11375312-11375451 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 87 |
Show alignments to all cow chromosomes.