Cow genome map

Conread name: Pig2-117P05

Conread position: 1-397
Cow position: chr3:24591237-24591615 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 19

Conread position: 1-397
Cow position: chr3:63004332-63004726 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 1-426
Cow position: chr3:29595605-29595175 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 2-408
Cow position: chr3:48230600-48231015 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 2-426
Cow position: chr3:64357759-64358189 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 22

Conread position: 5-426
Cow position: chr3:52864060-52864495 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 19

Conread position: 7-242
Cow position: chr3:66991165-66990926 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 16

Conread position: 29-426
Cow position: chr3:19803038-19802637 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 231

Conread position: 34-424
Cow position: chr3:6685830-6685441 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 132

Conread position: 44-424
Cow position: chr3:3054929-3054578 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 74-396
Cow position: chr3:14632360-14632690 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 209

Conread position: 94-398
Cow position: chr3:36098405-36098713 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 279

Conread position: 107-429
Cow position: chr3:30929932-30929618 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 23

Conread position: 110-426
Cow position: chr3:2908072-2908380 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 110-426
Cow position: chr3:39327011-39326694 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 30

Conread position: 111-423
Cow position: chr3:42631307-42630996 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 56

Conread position: 114-426
Cow position: chr3:4027564-4027249 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 123-422
Cow position: chr3:45774816-45775106 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 121, 107

Conread position: 123-426
Cow position: chr3:3980670-3980368 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 123-426
Cow position: chr3:14754016-14754319 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 89

Conread position: 123-426
Cow position: chr3:34093164-34093470 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 235

Conread position: 130-426
Cow position: chr3:77443150-77442862 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 41

Conread position: 132-402
Cow position: chr3:26837487-26837760 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 93

Conread position: 134-400
Cow position: chr3:32842184-32842444 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 44, 18

Conread position: 146-426
Cow position: chr3:49162953-49162675 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 17

Conread position: 150-426
Cow position: chr3:21304925-21305203 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 87

Conread position: 150-426
Cow position: chr3:60209932-60210196 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 36

Conread position: 155-426
Cow position: chr3:26949756-26949492 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 20

Conread position: 159-426
Cow position: chr3:15178558-15178292 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 36

Conread position: 171-315
Cow position: chr3:63241542-63241688 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 177-427
Cow position: chr3:36127621-36127368 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 191-426
Cow position: chr3:48060618-48060854 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 191-426
Cow position: chr3:49678001-49677765 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 216

Conread position: 191-427
Cow position: chr3:26822293-26822524 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 30, 6

Conread position: 191-427
Cow position: chr3:51940211-51940443 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 89

Conread position: 191-429
Cow position: chr3:21182473-21182709 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 191-429
Cow position: chr3:40157291-40157530 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 35

Conread position: 191-429
Cow position: chr3:45869002-45869242 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 192-429
Cow position: chr3:45032960-45032716 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 192-429
Cow position: chr3:46861084-46861328 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 17, 52

Conread position: 192-429
Cow position: chr3:47178986-47179227 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 17, 50

Conread position: 193-426
Cow position: chr3:10239859-10239627 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 20

Conread position: 193-429
Cow position: chr3:64650845-64650600 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 52

Conread position: 194-423
Cow position: chr3:50127670-50127899 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 19

Conread position: 195-426
Cow position: chr3:58947665-58947436 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 98, 18

Conread position: 195-426
Cow position: chr3:77423882-77423659 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 109, 18

Conread position: 208-429
Cow position: chr3:2917661-2917436 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 33

Conread position: 208-429
Cow position: chr3:7168992-7168769 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 203

Conread position: 211-426
Cow position: chr3:66620365-66620152 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 82, 16

Conread position: 211-429
Cow position: chr3:472726-472507 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 211-429
Cow position: chr3:6782582-6782359 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 31

Conread position: 211-429
Cow position: chr3:18859612-18859393 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 31

Conread position: 212-374
Cow position: chr3:53713241-53713078 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 212-426
Cow position: chr3:206968-207183 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 212-426
Cow position: chr3:45895365-45895580 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 18, 24

Conread position: 212-426
Cow position: chr3:45974690-45974475 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 18, 24

Conread position: 212-429
Cow position: chr3:2634113-2633900 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 0

Conread position: 212-429
Cow position: chr3:2654295-2654081 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 151, 73

Conread position: 212-429
Cow position: chr3:5829436-5829653 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 131

Conread position: 212-429
Cow position: chr3:9717003-9716789 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 20, 26

Conread position: 212-429
Cow position: chr3:31354072-31354290 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 212-429
Cow position: chr3:31897784-31898002 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 212-429
Cow position: chr3:34395889-34396106 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 39

Conread position: 212-429
Cow position: chr3:55229508-55229727 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 212-429
Cow position: chr3:66119848-66119630 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 0

Conread position: 212-429
Cow position: chr3:66638933-66638715 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 212-429
Cow position: chr3:77474955-77474735 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 213-376
Cow position: chr3:36117855-36117691 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 19, 25

Conread position: 213-392
Cow position: chr3:29331085-29331265 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 25

Conread position: 213-426
Cow position: chr3:59861558-59861344 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 82, 0

Conread position: 213-429
Cow position: chr3:24314661-24314443 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 213-429
Cow position: chr3:36864167-36864384 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 213-429
Cow position: chr3:64027894-64028110 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 173

Conread position: 213-429
Cow position: chr3:68699781-68699994 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 19, 25

Conread position: 215-429
Cow position: chr3:42579779-42579992 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 78, 18

Conread position: 216-426
Cow position: chr3:3523210-3522999 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 24

Conread position: 218-429
Cow position: chr3:47081471-47081683 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 14, 20

Conread position: 218-429
Cow position: chr3:66890776-66890986 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 20

Conread position: 226-363
Cow position: chr3:40339933-40340071 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 6, 14

Conread position: 226-381
Cow position: chr3:7481053-7481212 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 226-404
Cow position: chr3:22336067-22335888 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 6, 12

Conread position: 226-419
Cow position: chr3:57484551-57484744 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 85

Conread position: 226-420
Cow position: chr3:32622858-32623051 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 11

Conread position: 226-424
Cow position: chr3:594755-594555 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 226-425
Cow position: chr3:69933573-69933373 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:5954007-5954208 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 226-426
Cow position: chr3:18542229-18542430 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:23213883-23214084 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:34030720-34030920 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 172

Conread position: 226-426
Cow position: chr3:36881743-36881944 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:40823566-40823365 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:42432410-42432209 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:49137361-49137562 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:72630249-72630047 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 226-426
Cow position: chr3:75040991-75041190 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 67, 35

Conread position: 226-426
Cow position: chr3:78027231-78027432 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 226-429
Cow position: chr3:7158554-7158757 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 66, 149

Conread position: 226-429
Cow position: chr3:14439582-14439786 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 12

Conread position: 226-429
Cow position: chr3:41211558-41211762 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 6, 12

Conread position: 226-429
Cow position: chr3:49613798-49614002 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 12

Conread position: 226-429
Cow position: chr3:56321494-56321291 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 12

Conread position: 226-429
Cow position: chr3:68873576-68873779 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 6, 12

Conread position: 227-447
Cow position: chr3:56340249-56340471 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 66, 0

Conread position: 231-429
Cow position: chr3:19878831-19878633 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 6

Conread position: 234-426
Cow position: chr3:30314738-30314544 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 235-424
Cow position: chr3:18463423-18463607 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 80

Conread position: 236-426
Cow position: chr3:64017195-64017386 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 236-429
Cow position: chr3:19939053-19938860 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 66

Conread position: 237-424
Cow position: chr3:2710794-2710981 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 130

Conread position: 237-426
Cow position: chr3:5995529-5995719 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 237-426
Cow position: chr3:49545039-49545229 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 237-429
Cow position: chr3:70083486-70083677 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 37

Conread position: 238-426
Cow position: chr3:5883706-5883519 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 55, 180

Conread position: 238-426
Cow position: chr3:53515780-53515591 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 239-427
Cow position: chr3:19944216-19944034 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 118

Conread position: 241-426
Cow position: chr3:18356723-18356909 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 244-426
Cow position: chr3:18811664-18811481 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 244-426
Cow position: chr3:19756798-19756981 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 248-429
Cow position: chr3:15988871-15989060 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 9

Conread position: 258-426
Cow position: chr3:23291256-23291428 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 35, 160

Conread position: 259-426
Cow position: chr3:50915452-50915282 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 270-429
Cow position: chr3:5047049-5047209 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 284-426
Cow position: chr3:32145971-32146112 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 287-429
Cow position: chr3:17828532-17828674 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 301-426
Cow position: chr3:54864596-54864721 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 301-430
Cow position: chr3:57856840-57856711 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 302-426
Cow position: chr3:38866497-38866373 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 305-429
Cow position: chr3:43039607-43039730 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 347-562
Cow position: chr3:50915307-50915088 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 57

Conread position: 403-554
Cow position: chr3:594520-594371 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 127, 18

Conread position: 403-554
Cow position: chr3:38866343-38866194 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 18

Conread position: 403-561
Cow position: chr3:5995751-5995913 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 18

Conread position: 403-561
Cow position: chr3:19757014-19757176 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 18

Conread position: 403-561
Cow position: chr3:40823332-40823172 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 19

Conread position: 403-561
Cow position: chr3:48060885-48061047 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 18

Conread position: 403-561
Cow position: chr3:64017419-64017580 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 18

Conread position: 403-561
Cow position: chr3:66620121-66619962 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 18

Conread position: 403-561
Cow position: chr3:72630014-72629852 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 18

Conread position: 403-561
Cow position: chr3:78027465-78027627 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 18

Conread position: 403-562
Cow position: chr3:42432176-42432018 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 18

Conread position: 403-562
Cow position: chr3:56340482-56340641 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 18

Conread position: 403-562
Cow position: chr3:57856682-57856520 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 18

Conread position: 403-567
Cow position: chr3:47081713-47081880 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 18

Conread position: 404-542
Cow position: chr3:46861359-46861499 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 17

Conread position: 404-557
Cow position: chr3:64028141-64028296 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 22

Conread position: 404-560
Cow position: chr3:3522965-3522799 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 17

Conread position: 404-565
Cow position: chr3:17828705-17828869 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 17

Conread position: 404-565
Cow position: chr3:37969023-37968861 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 17

Conread position: 404-567
Cow position: chr3:2917405-2917240 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 17

Conread position: 404-567
Cow position: chr3:4285830-4285663 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 17

Conread position: 404-567
Cow position: chr3:7158788-7158953 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 17

Conread position: 404-567
Cow position: chr3:7168738-7168573 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 17

Conread position: 404-567
Cow position: chr3:15989091-15989258 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 17

Conread position: 404-567
Cow position: chr3:47179258-47179426 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 17

Conread position: 404-567
Cow position: chr3:49614033-49614199 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 17

Conread position: 415-561
Cow position: chr3:32842497-32842645 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 99

Conread position: 421-547
Cow position: chr3:57484799-57484928 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 94

Conread position: 421-554
Cow position: chr3:4027199-4027066 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 68

Conread position: 421-556
Cow position: chr3:3054527-3054393 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 94

Conread position: 421-560
Cow position: chr3:46677986-46678128 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 94

Conread position: 421-560
Cow position: chr3:51940488-51940630 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 94

Conread position: 421-560
Cow position: chr3:58947386-58947240 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 95

Conread position: 421-561
Cow position: chr3:10239577-10239432 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 94

Conread position: 421-561
Cow position: chr3:18811432-18811286 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 421-561
Cow position: chr3:21182756-21182901 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 93

Conread position: 421-561
Cow position: chr3:34030970-34031113 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 94

Conread position: 421-561
Cow position: chr3:59861294-59861149 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 94

Conread position: 421-561
Cow position: chr3:69933322-69933181 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 94

Conread position: 421-561
Cow position: chr3:70083718-70083862 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 93

Conread position: 421-561
Cow position: chr3:75041238-75041383 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 94

Conread position: 421-561
Cow position: chr3:77474688-77474544 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 94

Conread position: 421-562
Cow position: chr3:2633853-2633711 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 66

Conread position: 421-562
Cow position: chr3:2654034-2653890 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 32, 94

Conread position: 421-562
Cow position: chr3:6685388-6685244 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 93

Conread position: 421-562
Cow position: chr3:18859348-18859203 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 94

Conread position: 421-562
Cow position: chr3:19802588-19802442 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 94

Conread position: 421-562
Cow position: chr3:64358239-64358383 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 64

Conread position: 421-562
Cow position: chr3:64650553-64650415 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 31

Conread position: 421-567
Cow position: chr3:6782316-6782165 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 94

Conread position: 421-567
Cow position: chr3:18463657-18463808 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 94

Conread position: 421-567
Cow position: chr3:22335821-22335670 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 94

Conread position: 421-567
Cow position: chr3:24314407-24314256 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 94

Conread position: 421-567
Cow position: chr3:36117604-36117453 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 94

Conread position: 421-567
Cow position: chr3:45032669-45032519 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 77

Conread position: 421-569
Cow position: chr3:5047256-5047409 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 94

Conread position: 421-570
Cow position: chr3:32623094-32623248 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 94

Conread position: 422-550
Cow position: chr3:26949436-26949311 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 29

Conread position: 422-562
Cow position: chr3:14634185-14634329 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 15

Conread position: 422-567
Cow position: chr3:19878589-19878440 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 76

Conread position: 426-561
Cow position: chr3:55229775-55229910 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 129, 76

Conread position: 426-561
Cow position: chr3:57901139-57901000 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 89

Conread position: 426-562
Cow position: chr3:207242-207377 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 129, 36

Conread position: 426-562
Cow position: chr3:472455-472316 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 89

Conread position: 426-562
Cow position: chr3:9716737-9716596 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 89

Conread position: 426-562
Cow position: chr3:31898053-31898189 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 78

Conread position: 426-562
Cow position: chr3:42580043-42580183 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 31, 88

Conread position: 426-562
Cow position: chr3:45869294-45869427 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 41

Conread position: 426-562
Cow position: chr3:66119578-66119439 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 89

Conread position: 426-562
Cow position: chr3:66638663-66638522 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 89

Conread position: 426-565
Cow position: chr3:50127957-50128099 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 90

Conread position: 427-569
Cow position: chr3:56321239-56321094 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 88

Conread position: 437-567
Cow position: chr3:66990713-66990579 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 78

Conread position: 442-560
Cow position: chr3:31354351-31354472 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 73

Show alignments to all cow chromosomes.