Cow genome map
| Conread name: | Pig2-117P05 |
| Conread position: | 5-338 |
| Cow position: | chr5:40053747-40053424 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 6-426 |
| Cow position: | chr5:46660021-46659592 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 44-424 |
| Cow position: | chr5:49593183-49593576 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 46-241 |
| Cow position: | chr5:61272597-61272799 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 165 |
| Conread position: | 117-426 |
| Cow position: | chr5:46630262-46630564 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 47 |
| Conread position: | 123-368 |
| Cow position: | chr5:27058940-27059188 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 240 |
| Conread position: | 123-368 |
| Cow position: | chr5:27059843-27060091 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 240 |
| Conread position: | 123-394 |
| Cow position: | chr5:18117403-18117667 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 57 |
| Conread position: | 123-426 |
| Cow position: | chr5:39247229-39247505 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 123-426 |
| Cow position: | chr5:49129400-49129098 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 112 |
| Conread position: | 123-429 |
| Cow position: | chr5:23755454-23755747 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 129-426 |
| Cow position: | chr5:25000475-25000767 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 47, 95 |
| Conread position: | 130-424 |
| Cow position: | chr5:27489422-27489126 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 130-429 |
| Cow position: | chr5:52434141-52433845 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 134-371 |
| Cow position: | chr5:23228396-23228163 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 134-387 |
| Cow position: | chr5:27682568-27682828 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 54, 183 |
| Conread position: | 136-326 |
| Cow position: | chr5:7502742-7502933 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 138 |
| Conread position: | 137-420 |
| Cow position: | chr5:76123407-76123696 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 138-426 |
| Cow position: | chr5:29435790-29436092 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 43, 113 |
| Conread position: | 141-426 |
| Cow position: | chr5:61019700-61019967 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 151, 40 |
| Conread position: | 142-426 |
| Cow position: | chr5:41529428-41529714 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 125 |
| Conread position: | 176-389 |
| Cow position: | chr5:18271734-18271522 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 49 |
| Conread position: | 176-425 |
| Cow position: | chr5:27001737-27001488 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 187-426 |
| Cow position: | chr5:55628103-55627865 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 131 |
| Conread position: | 190-429 |
| Cow position: | chr5:34203050-34202814 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 211 |
| Conread position: | 191-429 |
| Cow position: | chr5:26769921-26769684 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 149 |
| Conread position: | 192-429 |
| Cow position: | chr5:6588902-6589147 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 192-429 |
| Cow position: | chr5:10776146-10776390 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 192-429 |
| Cow position: | chr5:45181985-45182229 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 192-429 |
| Cow position: | chr5:47830995-47831233 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 192-483 |
| Cow position: | chr5:45700384-45700083 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 193-426 |
| Cow position: | chr5:46738474-46738708 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 195-426 |
| Cow position: | chr5:32673633-32673866 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 195-426 |
| Cow position: | chr5:41962129-41962361 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 199-476 |
| Cow position: | chr5:3964563-3964290 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 205-397 |
| Cow position: | chr5:53626666-53626854 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 211-338 |
| Cow position: | chr5:18666089-18665959 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 211-429 |
| Cow position: | chr5:4019101-4019324 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 211-429 |
| Cow position: | chr5:26079124-26079344 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 211-429 |
| Cow position: | chr5:31706671-31706450 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 211-429 |
| Cow position: | chr5:32772579-32772356 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 211-429 |
| Cow position: | chr5:58196099-58195876 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 212-338 |
| Cow position: | chr5:6612103-6611976 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 212-411 |
| Cow position: | chr5:39164708-39164908 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 212-419 |
| Cow position: | chr5:28007282-28007084 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 212-424 |
| Cow position: | chr5:49119189-49119402 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 212-426 |
| Cow position: | chr5:4385338-4385132 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 212-426 |
| Cow position: | chr5:32945966-32945751 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 212-429 |
| Cow position: | chr5:9686335-9686554 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 212-429 |
| Cow position: | chr5:20971954-20972158 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 212-429 |
| Cow position: | chr5:27651890-27652109 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 212-429 |
| Cow position: | chr5:41550834-41551053 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 212-429 |
| Cow position: | chr5:49182361-49182143 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 212-449 |
| Cow position: | chr5:29009445-29009208 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 92, 80 |
| Conread position: | 213-392 |
| Cow position: | chr5:9043129-9042949 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 213-406 |
| Cow position: | chr5:10843326-10843522 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 213-429 |
| Cow position: | chr5:24577006-24576789 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 213-429 |
| Cow position: | chr5:44459574-44459357 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 213-429 |
| Cow position: | chr5:46644780-46644561 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 213-429 |
| Cow position: | chr5:48468188-48468405 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 213-429 |
| Cow position: | chr5:59482344-59482128 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 115 |
| Conread position: | 216-426 |
| Cow position: | chr5:57977344-57977136 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 218-429 |
| Cow position: | chr5:27909186-27909398 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 219-429 |
| Cow position: | chr5:28031563-28031351 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 219-429 |
| Cow position: | chr5:46776166-46775952 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 219-562 |
| Cow position: | chr5:27570197-27569832 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 309 |
| Conread position: | 225-429 |
| Cow position: | chr5:32733173-32733378 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 226-337 |
| Cow position: | chr5:18122390-18122502 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 226-425 |
| Cow position: | chr5:2914526-2914329 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:415644-415845 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:4069066-4068867 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:24098727-24098526 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:30579400-30579199 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:37732424-37732223 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:49518736-49518537 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 67, 157 |
| Conread position: | 226-426 |
| Cow position: | chr5:57482468-57482669 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 226-426 |
| Cow position: | chr5:73489483-73489684 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 115 |
| Conread position: | 226-429 |
| Cow position: | chr5:2531349-2531145 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 226-429 |
| Cow position: | chr5:14380240-14380037 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 226-429 |
| Cow position: | chr5:29042589-29042386 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 151 |
| Conread position: | 226-429 |
| Cow position: | chr5:46664081-46663877 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 227-426 |
| Cow position: | chr5:54932141-54932341 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 227-444 |
| Cow position: | chr5:23960238-23960455 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 231-429 |
| Cow position: | chr5:59060690-59060495 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 6 |
| Conread position: | 236-426 |
| Cow position: | chr5:3785854-3785667 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 237-424 |
| Cow position: | chr5:64781951-64782139 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 237-426 |
| Cow position: | chr5:2430065-2430255 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 237-426 |
| Cow position: | chr5:26089765-26089954 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 237-429 |
| Cow position: | chr5:24330341-24330148 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 238-426 |
| Cow position: | chr5:48808649-48808838 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 239-390 |
| Cow position: | chr5:54792570-54792722 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 243-426 |
| Cow position: | chr5:1341736-1341916 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 244-426 |
| Cow position: | chr5:10918858-10918675 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 245-415 |
| Cow position: | chr5:34696662-34696490 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 248-426 |
| Cow position: | chr5:3504194-3504373 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 248-562 |
| Cow position: | chr5:12643886-12644194 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 61 |
| Conread position: | 255-426 |
| Cow position: | chr5:6158149-6158320 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 256-426 |
| Cow position: | chr5:61273139-61273305 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 132 |
| Conread position: | 258-426 |
| Cow position: | chr5:17773994-17774163 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 267-429 |
| Cow position: | chr5:5786570-5786733 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 295-429 |
| Cow position: | chr5:58819626-58819760 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-429 |
| Cow position: | chr5:18654047-18653919 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 379-562 |
| Cow position: | chr5:32673875-32674061 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 401-567 |
| Cow position: | chr5:10844028-10844198 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 403-546 |
| Cow position: | chr5:415878-416023 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-547 |
| Cow position: | chr5:49518504-49518358 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-554 |
| Cow position: | chr5:6589177-6589330 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 403-561 |
| Cow position: | chr5:37732190-37732028 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-561 |
| Cow position: | chr5:64782174-64782334 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 403-562 |
| Cow position: | chr5:4068834-4068671 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 403-562 |
| Cow position: | chr5:10918642-10918479 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 403-562 |
| Cow position: | chr5:31101753-31101914 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 403-562 |
| Cow position: | chr5:39164954-39165116 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 403-565 |
| Cow position: | chr5:47831260-47831425 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 403-567 |
| Cow position: | chr5:44459327-44459159 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 18 |
| Conread position: | 404-550 |
| Cow position: | chr5:10776421-10776569 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 404-565 |
| Cow position: | chr5:4019355-4019519 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 404-567 |
| Cow position: | chr5:2531114-2530947 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 404-567 |
| Cow position: | chr5:18665805-18665638 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 404-567 |
| Cow position: | chr5:29042355-29042188 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 404-567 |
| Cow position: | chr5:32772325-32772158 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 404-567 |
| Cow position: | chr5:45182266-45182433 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 404-567 |
| Cow position: | chr5:54932375-54932541 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 404-567 |
| Cow position: | chr5:58195845-58195678 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 421-531 |
| Cow position: | chr5:34202767-34202656 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 421-537 |
| Cow position: | chr5:7273679-7273561 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 421-554 |
| Cow position: | chr5:24098476-24098340 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 421-560 |
| Cow position: | chr5:24576741-24576597 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 421-561 |
| Cow position: | chr5:2430305-2430450 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 421-561 |
| Cow position: | chr5:32945701-32945563 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 421-561 |
| Cow position: | chr5:45700111-45699966 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 421-561 |
| Cow position: | chr5:46738758-46738902 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 421-561 |
| Cow position: | chr5:48808888-48809033 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 421-561 |
| Cow position: | chr5:57482719-57482864 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 421-562 |
| Cow position: | chr5:27652159-27652296 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 421-562 |
| Cow position: | chr5:31706403-31706257 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 421-567 |
| Cow position: | chr5:4088632-4088481 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 421-567 |
| Cow position: | chr5:27909443-27909594 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 421-567 |
| Cow position: | chr5:46005556-46005707 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 421-567 |
| Cow position: | chr5:48468449-48468600 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 421-567 |
| Cow position: | chr5:59060448-59060297 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 421-569 |
| Cow position: | chr5:58819807-58819960 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 423-552 |
| Cow position: | chr5:5317931-5318063 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 423-567 |
| Cow position: | chr5:59482080-59481931 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 425-566 |
| Cow position: | chr5:49593632-49593778 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 426-561 |
| Cow position: | chr5:26769633-26769493 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 426-561 |
| Cow position: | chr5:32733430-32733561 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 426-562 |
| Cow position: | chr5:25206919-25207060 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 426-562 |
| Cow position: | chr5:41551105-41551243 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 426-562 |
| Cow position: | chr5:41962416-41962553 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 427-564 |
| Cow position: | chr5:53715075-53714934 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 427-567 |
| Cow position: | chr5:26079397-26079542 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 88 |
| Conread position: | 437-569 |
| Cow position: | chr5:41529762-41529896 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 76 |
Show alignments to all cow chromosomes.