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Cow genome map

           
Conread name:
           
Pig2-117P05
        

               
Conread position:
               
2-426
               

               
Cow position:
               
chrX:6282793-6283238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chrX:21587481-21587123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
32-395
               

               
Cow position:
               
chrX:2536541-2536895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chrX:16016865-16017290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
44-424
               

               
Cow position:
               
chrX:31725275-31724882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
59-426
               

               
Cow position:
               
chrX:30142173-30142539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
73-411
               

               
Cow position:
               
chrX:35021476-35021134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chrX:2143482-2143136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
112-425
               

               
Cow position:
               
chrX:44386639-44386327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 101
               

               
Conread position:
               
115-426
               

               
Cow position:
               
chrX:40247157-40247460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 42
               

               
Conread position:
               
117-426
               

               
Cow position:
               
chrX:31191649-31191949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
120-426
               

               
Cow position:
               
chrX:17668142-17668436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
123-394
               

               
Cow position:
               
chrX:22130519-22130794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
123-415
               

               
Cow position:
               
chrX:13052784-13052497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
123-419
               

               
Cow position:
               
chrX:30368858-30369156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
123-426
               

               
Cow position:
               
chrX:12973073-12973375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
123-426
               

               
Cow position:
               
chrX:18533147-18532850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
123-460
               

               
Cow position:
               
chrX:28550023-28549685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
128-426
               

               
Cow position:
               
chrX:21270044-21270342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
130-420
               

               
Cow position:
               
chrX:20698148-20698435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
134-418
               

               
Cow position:
               
chrX:24138879-24139164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 189
               

               
Conread position:
               
145-424
               

               
Cow position:
               
chrX:30132701-30132979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
229, 42
               

               
Conread position:
               
146-426
               

               
Cow position:
               
chrX:22814520-22814236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
177-424
               

               
Cow position:
               
chrX:5840436-5840189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
116, 192
               

               
Conread position:
               
183-421
               

               
Cow position:
               
chrX:34988995-34988756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chrX:29285514-29285272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
191-429
               

               
Cow position:
               
chrX:22619213-22619458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
192-426
               

               
Cow position:
               
chrX:31187151-31187391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chrX:2101954-2101710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chrX:7030281-7030040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chrX:8587187-8586945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chrX:16275772-16275528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
192-429
               

               
Cow position:
               
chrX:29947802-29947558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
197-429
               

               
Cow position:
               
chrX:28634327-28634565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
198-426
               

               
Cow position:
               
chrX:29998867-29998646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chrX:18954449-18954666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
205-429
               

               
Cow position:
               
chrX:22525523-22525753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
206-390
               

               
Cow position:
               
chrX:30011117-30010929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
211-391
               

               
Cow position:
               
chrX:29096270-29096092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
211-426
               

               
Cow position:
               
chrX:37812236-37812016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
211-429
               

               
Cow position:
               
chrX:2604122-2603900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
211-429
               

               
Cow position:
               
chrX:24275740-24275522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 198
               

               
Conread position:
               
211-429
               

               
Cow position:
               
chrX:28758567-28758790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
212-355
               

               
Cow position:
               
chrX:30990162-30990016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-392
               

               
Cow position:
               
chrX:6275548-6275730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
212-401
               

               
Cow position:
               
chrX:37142521-37142711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-423
               

               
Cow position:
               
chrX:29950511-29950716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chrX:39719509-39719294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 106
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:320536-320322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:970836-970620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:1547006-1546789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:23019393-23019178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:27494779-27494562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:30056714-30056496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-426
               

               
Cow position:
               
chrX:32467321-32467106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
212-427
               

               
Cow position:
               
chrX:29794047-29794259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:1833900-1833679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:6909277-6909479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 124
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:12669795-12670014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:13006556-13006774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:20804196-20803977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:21289422-21289640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:21602948-21602730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:21632518-21632736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:24121851-24122067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 206
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:24136336-24136548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:24484344-24484561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 88
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:26627963-26628181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:28603390-28603607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:30044076-30044294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
212-429
               

               
Cow position:
               
chrX:35017878-35017661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
73, 207
               

               
Conread position:
               
213-372
               

               
Cow position:
               
chrX:30055668-30055828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-400
               

               
Cow position:
               
chrX:11433769-11433581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:982706-982489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:5283667-5283883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:8454820-8454603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:8670659-8670443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:9192576-9192793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:16363056-16363273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:17478454-17478673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:18659715-18659931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:21304458-21304675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:23047212-23046997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:39521975-39521758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chrX:41410953-41411170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chrX:5323656-5323869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chrX:21340471-21340254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chrX:9125426-9125210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chrX:12803801-12804013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chrX:22778380-22778163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
218-414
               

               
Cow position:
               
chrX:16812531-16812727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chrX:22582636-22582844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
218-429
               

               
Cow position:
               
chrX:6873010-6873220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
218-429
               

               
Cow position:
               
chrX:40057001-40057214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
219-411
               

               
Cow position:
               
chrX:26505247-26505053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
219-429
               

               
Cow position:
               
chrX:16461733-16461528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
219-429
               

               
Cow position:
               
chrX:30173608-30173819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
225-364
               

               
Cow position:
               
chrX:41851343-41851483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
225-426
               

               
Cow position:
               
chrX:47457641-47457844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
226-332
               

               
Cow position:
               
chrX:3376053-3376160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-407
               

               
Cow position:
               
chrX:20359996-20360174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chrX:23041068-23041267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:2482583-2482784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:12280215-12280415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:12353295-12353094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:15598985-15598784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:16699355-16699154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:21222983-21222782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:23455523-23455724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:26758550-26758751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:26767143-26767344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:30232053-30232254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:30711404-30711207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:31493475-31493275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:37849069-37848868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chrX:38146360-38146159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:1942989-1943193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:2562802-2563006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:5863453-5863249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 14
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:9008393-9008189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:11464947-11465151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:12654705-12654904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:13398065-13398265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:14786817-14787021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:17051150-17050944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:18219452-18219248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:24089457-24089253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:27426265-27426465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:28562159-28562363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:28585035-28584831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:35529917-35529711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chrX:39563876-39564080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
226-430
               

               
Cow position:
               
chrX:30178940-30179144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
226-449
               

               
Cow position:
               
chrX:7093653-7093428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
227-425
               

               
Cow position:
               
chrX:15179377-15179576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
227-429
               

               
Cow position:
               
chrX:7751954-7751751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
227-429
               

               
Cow position:
               
chrX:13076643-13076846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
227-429
               

               
Cow position:
               
chrX:13097217-13097420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
227-429
               

               
Cow position:
               
chrX:27989727-27989933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
227-429
               

               
Cow position:
               
chrX:29872511-29872708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
144, 46
               

               
Conread position:
               
231-420
               

               
Cow position:
               
chrX:20316006-20316195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
231-429
               

               
Cow position:
               
chrX:7481652-7481454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
231-429
               

               
Cow position:
               
chrX:10531509-10531707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 6
               

               
Conread position:
               
234-426
               

               
Cow position:
               
chrX:21829572-21829378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
235-429
               

               
Cow position:
               
chrX:30183848-30184043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
235-429
               

               
Cow position:
               
chrX:38575775-38575971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
237-411
               

               
Cow position:
               
chrX:23277066-23276891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
237-426
               

               
Cow position:
               
chrX:23391555-23391745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chrX:11663461-11663654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
237-429
               

               
Cow position:
               
chrX:26400425-26400616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
239-425
               

               
Cow position:
               
chrX:22488223-22488036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
239-426
               

               
Cow position:
               
chrX:15127200-15127387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 159
               

               
Conread position:
               
239-426
               

               
Cow position:
               
chrX:26528018-26527830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
244-398
               

               
Cow position:
               
chrX:3421427-3421580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
244-426
               

               
Cow position:
               
chrX:13413079-13413262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
245-392
               

               
Cow position:
               
chrX:5299187-5299335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chrX:12997543-12997728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
251-427
               

               
Cow position:
               
chrX:29853536-29853713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
253-429
               

               
Cow position:
               
chrX:5833936-5834113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
255-429
               

               
Cow position:
               
chrX:5394936-5395111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
256-426
               

               
Cow position:
               
chrX:32094938-32095112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
256-429
               

               
Cow position:
               
chrX:2859776-2859950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
267-419
               

               
Cow position:
               
chrX:21795109-21794956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
282-429
               

               
Cow position:
               
chrX:21490228-21490082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
295-429
               

               
Cow position:
               
chrX:5336485-5336617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
301-429
               

               
Cow position:
               
chrX:3084923-3085050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
307-426
               

               
Cow position:
               
chrX:11668469-11668588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-567
               

               
Cow position:
               
chrX:24381186-24380964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 72
               

               
Conread position:
               
353-554
               

               
Cow position:
               
chrX:29794239-29794445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
379-567
               

               
Cow position:
               
chrX:7093443-7093252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
396-560
               

               
Cow position:
               
chrX:11465173-11465341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
403-531
               

               
Cow position:
               
chrX:5299398-5299522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
403-554
               

               
Cow position:
               
chrX:23041302-23041447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:1546756-1546594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:13413294-13413456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:16699121-16698959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:21222749-21222587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:22778133-22777972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:23455757-23455911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:26527797-26527635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
403-561
               

               
Cow position:
               
chrX:30711174-30711013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
403-562
               

               
Cow position:
               
chrX:15127420-15127583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
403-562
               

               
Cow position:
               
chrX:16237130-16236971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
403-567
               

               
Cow position:
               
chrX:24325323-24325492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
403-567
               

               
Cow position:
               
chrX:39521728-39521560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
403-567
               

               
Cow position:
               
chrX:41411200-41411368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
404-531
               

               
Cow position:
               
chrX:982458-982331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-554
               

               
Cow position:
               
chrX:8586914-8586762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
404-560
               

               
Cow position:
               
chrX:3421621-3421778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-560
               

               
Cow position:
               
chrX:8479521-8479365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
404-565
               

               
Cow position:
               
chrX:13076877-13077038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-565
               

               
Cow position:
               
chrX:13097451-13097612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-565
               

               
Cow position:
               
chrX:22582880-22583044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
404-565
               

               
Cow position:
               
chrX:29947527-29947362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:2101679-2101512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:2859981-2860148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:7481423-7481257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:8454572-8454409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:8670412-8670246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:9125179-9125012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:9192824-9192991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:12289121-12289288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:12342013-12341850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:12804044-12804209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:13398296-13398463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:18219217-18219050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:18659962-18660129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:26400647-26400814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:27426496-27426663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:30173847-30174009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:35529680-35529513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
404-567
               

               
Cow position:
               
chrX:37848834-37848668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
405-561
               

               
Cow position:
               
chrX:970585-970425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
421-545
               

               
Cow position:
               
chrX:23019128-23019002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
421-546
               

               
Cow position:
               
chrX:30184090-30184217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
421-552
               

               
Cow position:
               
chrX:22814186-22814057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
421-554
               

               
Cow position:
               
chrX:2603853-2603717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-554
               

               
Cow position:
               
chrX:14787068-14787204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
421-554
               

               
Cow position:
               
chrX:21829328-21829192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
421-554
               

               
Cow position:
               
chrX:32095162-32095294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
421-554
               

               
Cow position:
               
chrX:37811966-37811830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:5323919-5324063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:16363320-16363462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:17478720-17478865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:21490035-21489891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:24089206-24089063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:28758823-28758965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chrX:39564127-39564269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
421-561
               

               
Cow position:
               
chrX:15598734-15598589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
421-561
               

               
Cow position:
               
chrX:18532801-18532659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
421-561
               

               
Cow position:
               
chrX:30179189-30179333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:12478522-12478380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:15179626-15179771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:23046950-23046805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:26504993-26504849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:26767394-26767537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:27494512-27494366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:29950769-29950915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
421-562
               

               
Cow position:
               
chrX:30142588-30142730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:1833632-1833481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:2563053-2563204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:5283930-5284081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:5863202-5863051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:6873267-6873416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:7751703-7751552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:10531754-10531905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:16275481-16275330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:16935753-16935902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:20316251-20316402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:28562410-28562560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:28634612-28634762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
421-567
               

               
Cow position:
               
chrX:31187441-31187580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
422-531
               

               
Cow position:
               
chrX:21586969-21586860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
422-560
               

               
Cow position:
               
chrX:320272-320131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
422-562
               

               
Cow position:
               
chrX:17668483-17668628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
422-564
               

               
Cow position:
               
chrX:29872756-29872903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
423-567
               

               
Cow position:
               
chrX:30666136-30666285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
426-531
               

               
Cow position:
               
chrX:26628233-26628339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
426-561
               

               
Cow position:
               
chrX:20803925-20803788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:2536972-2537113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:21289692-21289833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:21602682-21602546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:21632784-21632925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:24122119-24122259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:28603658-28603797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 87
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:30046317-30046459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:35017613-35017472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
426-562
               

               
Cow position:
               
chrX:40057265-40057406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
426-567
               

               
Cow position:
               
chrX:12654956-12655100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
427-562
               

               
Cow position:
               
chrX:6275795-6275935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
433-567
               

               
Cow position:
               
chrX:12280463-12280602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 82
               
Show alignments to all cow chromosomes.