Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 1-303 |
| Cow position: | chr10:31524229-31523913 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 261 |
| Conread position: | 1-310 |
| Cow position: | chr10:42629054-42628730 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-363 |
| Cow position: | chr10:33347029-33346653 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 5-226 |
| Cow position: | chr10:54979045-54979280 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-539 |
| Cow position: | chr10:44295261-44294715 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 348 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 5-544 |
| Cow position: | chr10:32064583-32064021 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 347 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 491 |
| Conread position: | 5-547 |
| Cow position: | chr10:38847770-38847235 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 177 |
| Conread position: | 6-347 |
| Cow position: | chr10:8327850-8328203 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 6-371 |
| Cow position: | chr10:20371553-20371926 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 53, 257 |
| Conread position: | 15-381 |
| Cow position: | chr10:10415802-10415438 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 125, 54 |
| Conread position: | 15-385 |
| Cow position: | chr10:34317883-34318259 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 54, 212 |
| Conread position: | 15-536 |
| Cow position: | chr10:46191769-46191244 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 279 |
| Conread position: | 15-540 |
| Cow position: | chr10:15861717-15862262 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 366 |
| Conread position: | 15-548 |
| Cow position: | chr10:24298442-24298987 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 358 |
| Conread position: | 17-540 |
| Cow position: | chr10:14860379-14859850 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 352 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 52, 235 |
| Conread position: | 33-540 |
| Cow position: | chr10:38545827-38546350 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 33-548 |
| Cow position: | chr10:3543196-3543711 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 38-376 |
| Cow position: | chr10:49310880-49310544 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 172 |
| Conread position: | 38-545 |
| Cow position: | chr10:38404128-38404635 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 321 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 56-548 |
| Cow position: | chr10:24977768-24978266 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 70-548 |
| Cow position: | chr10:4191872-4192353 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 93-546 |
| Cow position: | chr10:11685338-11685802 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 296 |
| Conread position: | 94-292 |
| Cow position: | chr10:47157280-47157073 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 94-532 |
| Cow position: | chr10:39853678-39854134 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 329 |
| Conread position: | 94-540 |
| Cow position: | chr10:29696563-29696114 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 94-540 |
| Cow position: | chr10:62778680-62778218 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 308 |
| Conread position: | 94-543 |
| Cow position: | chr10:57559204-57559680 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 307 |
| Conread position: | 94-545 |
| Cow position: | chr10:280289-280752 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 198 |
| Conread position: | 94-545 |
| Cow position: | chr10:14804168-14803701 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 257 |
| Conread position: | 94-545 |
| Cow position: | chr10:21400339-21400805 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 94-545 |
| Cow position: | chr10:21740420-21740885 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 205 |
| Conread position: | 94-545 |
| Cow position: | chr10:41157779-41157317 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 94-545 |
| Cow position: | chr10:47907110-47906644 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 94-546 |
| Cow position: | chr10:19495954-19496411 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 278 |
| Conread position: | 94-546 |
| Cow position: | chr10:39817031-39817483 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 94-546 |
| Cow position: | chr10:41567434-41566974 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 94-546 |
| Cow position: | chr10:41877250-41876785 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 146 |
| Conread position: | 97-546 |
| Cow position: | chr10:7282361-7282816 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 196 |
| Conread position: | 122-511 |
| Cow position: | chr10:16925836-16925437 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 122-540 |
| Cow position: | chr10:62216907-62216479 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 241 |
| Conread position: | 122-546 |
| Cow position: | chr10:19511907-19511472 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 75 |
| Conread position: | 136-364 |
| Cow position: | chr10:11820612-11820384 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 50 |
| Conread position: | 137-294 |
| Cow position: | chr10:19802833-19802679 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 137-374 |
| Cow position: | chr10:19758628-19758392 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 89, 102 |
| Conread position: | 137-504 |
| Cow position: | chr10:46694096-46694466 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 242 |
| Conread position: | 137-545 |
| Cow position: | chr10:32578569-32578170 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 169 |
| Conread position: | 137-545 |
| Cow position: | chr10:39180063-39179650 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 163 |
| Conread position: | 137-547 |
| Cow position: | chr10:25498632-25498217 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 276 |
| Conread position: | 137-547 |
| Cow position: | chr10:51952342-51952740 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 49 |
| Conread position: | 142-374 |
| Cow position: | chr10:40152180-40152413 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 108, 128 |
| Conread position: | 143-364 |
| Cow position: | chr10:6260522-6260745 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 195 |
| Conread position: | 143-542 |
| Cow position: | chr10:34686167-34685766 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 237 |
| Conread position: | 144-479 |
| Cow position: | chr10:2122989-2123327 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 236 |
| Conread position: | 146-364 |
| Cow position: | chr10:41389273-41389492 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 148-364 |
| Cow position: | chr10:10582072-10581843 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 168 |
| Conread position: | 148-538 |
| Cow position: | chr10:39905210-39904801 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 114, 87 |
| Conread position: | 148-542 |
| Cow position: | chr10:10477867-10478273 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 276 |
| Conread position: | 148-546 |
| Cow position: | chr10:124579-124176 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 258 |
| Conread position: | 148-546 |
| Cow position: | chr10:1375802-1375403 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 234 |
| Conread position: | 148-546 |
| Cow position: | chr10:8290247-8289850 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 50 |
| Conread position: | 148-546 |
| Cow position: | chr10:21487184-21486783 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 233 |
| Conread position: | 148-546 |
| Cow position: | chr10:22101499-22101108 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 34 |
| Conread position: | 148-546 |
| Cow position: | chr10:25359668-25359266 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 232 |
| Conread position: | 148-546 |
| Cow position: | chr10:38345093-38345496 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 232 |
| Conread position: | 148-546 |
| Cow position: | chr10:39041033-39041438 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 264 |
| Conread position: | 148-547 |
| Cow position: | chr10:38538224-38538632 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 242 |
| Conread position: | 148-548 |
| Cow position: | chr10:37770090-37769687 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 139 |
| Conread position: | 149-540 |
| Cow position: | chr10:13365602-13365978 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 169, 215 |
| Conread position: | 149-546 |
| Cow position: | chr10:32651001-32650599 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 231 |
| Conread position: | 149-546 |
| Cow position: | chr10:62408589-62408985 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 138 |
| Conread position: | 149-547 |
| Cow position: | chr10:24313568-24313963 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 82, 91 |
| Conread position: | 151-540 |
| Cow position: | chr10:41351497-41351882 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 164, 35 |
| Conread position: | 151-546 |
| Cow position: | chr10:25564992-25565379 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 213 |
| Conread position: | 155-548 |
| Cow position: | chr10:29632601-29632996 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 236 |
| Conread position: | 160-371 |
| Cow position: | chr10:55093496-55093286 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 151, 49 |
| Conread position: | 160-545 |
| Cow position: | chr10:19143081-19143471 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 111 |
| Conread position: | 165-356 |
| Cow position: | chr10:28931774-28931966 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 153, 12 |
| Conread position: | 189-546 |
| Cow position: | chr10:276817-276460 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 213-540 |
| Cow position: | chr10:14928832-14928521 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 177, 30 |
| Conread position: | 215-440 |
| Cow position: | chr10:54979681-54979905 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 269-548 |
| Cow position: | chr10:60489802-60489527 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 272-545 |
| Cow position: | chr10:19840298-19840019 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 293-546 |
| Cow position: | chr10:29846485-29846743 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 324-546 |
| Cow position: | chr10:57989875-57990097 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 127, 88 |
Show alignments to all cow chromosomes.