Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 1-548 |
| Cow position: | chr12:15950914-15951470 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 5-540 |
| Cow position: | chr12:21500451-21499915 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 335 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 24-429 |
| Cow position: | chr12:18501358-18500950 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 26-375 |
| Cow position: | chr12:48405578-48405237 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 31-540 |
| Cow position: | chr12:8311496-8310983 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 69-546 |
| Cow position: | chr12:32653823-32653336 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 94-540 |
| Cow position: | chr12:3056-2596 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 94-540 |
| Cow position: | chr12:26946733-26947183 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 94-545 |
| Cow position: | chr12:3361161-3360695 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 279 |
| Conread position: | 94-545 |
| Cow position: | chr12:37558813-37558349 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 280 |
| Conread position: | 94-545 |
| Cow position: | chr12:43031128-43031591 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 94-546 |
| Cow position: | chr12:21254399-21254864 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 265 |
| Conread position: | 94-547 |
| Cow position: | chr12:45261880-45261405 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 312 |
| Conread position: | 94-548 |
| Cow position: | chr12:2282803-2282337 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 279 |
| Conread position: | 95-355 |
| Cow position: | chr12:21198217-21197943 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 106-287 |
| Cow position: | chr12:5861398-5861209 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 122-544 |
| Cow position: | chr12:27932719-27933152 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 264 |
| Conread position: | 122-546 |
| Cow position: | chr12:25100835-25101270 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 290 |
| Conread position: | 122-546 |
| Cow position: | chr12:28765793-28766225 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 265 |
| Conread position: | 136-355 |
| Cow position: | chr12:14662427-14662648 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 137-344 |
| Cow position: | chr12:33986367-33986158 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 137-545 |
| Cow position: | chr12:21426899-21426485 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 269 |
| Conread position: | 137-546 |
| Cow position: | chr12:22332829-22332413 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 98 |
| Conread position: | 137-548 |
| Cow position: | chr12:21941970-21941565 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 143-546 |
| Cow position: | chr12:11098440-11098033 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 144-546 |
| Cow position: | chr12:8677923-8678330 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 237 |
| Conread position: | 145-547 |
| Cow position: | chr12:1137771-1137378 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 66 |
| Conread position: | 146-540 |
| Cow position: | chr12:21902133-21901744 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 56 |
| Conread position: | 148-529 |
| Cow position: | chr12:22205553-22205938 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 128 |
| Conread position: | 148-543 |
| Cow position: | chr12:1402685-1402285 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 148-546 |
| Cow position: | chr12:20997939-20998328 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 177, 12 |
| Conread position: | 148-547 |
| Cow position: | chr12:251864-252265 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 24 |
| Conread position: | 149-364 |
| Cow position: | chr12:2838662-2838878 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 174, 28 |
| Conread position: | 149-546 |
| Cow position: | chr12:42859634-42860023 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 229 |
| Conread position: | 150-546 |
| Cow position: | chr12:6406456-6406855 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 230 |
| Conread position: | 163-546 |
| Cow position: | chr12:21207872-21207486 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 7 |
| Conread position: | 181-540 |
| Cow position: | chr12:8982263-8982619 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 149, 63 |
| Conread position: | 183-511 |
| Cow position: | chr12:3632106-3632427 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 139, 46 |
| Conread position: | 194-545 |
| Cow position: | chr12:26141962-26141605 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 170 |
| Conread position: | 411-540 |
| Cow position: | chr12:42420191-42420323 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.