Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 1-212 |
| Cow position: | chr13:15451428-15451647 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 1-548 |
| Cow position: | chr13:20542241-20542796 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 251 |
| Conread position: | 15-481 |
| Cow position: | chr13:34767179-34767638 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 303 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 81, 64 |
| Conread position: | 15-545 |
| Cow position: | chr13:54284685-54284154 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 232 |
| Conread position: | 34-546 |
| Cow position: | chr13:34937248-34936713 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 70-544 |
| Cow position: | chr13:32985999-32986477 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 71-540 |
| Cow position: | chr13:34186624-34187111 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 112 |
| Conread position: | 80-540 |
| Cow position: | chr13:62327535-62328005 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 80-542 |
| Cow position: | chr13:3277204-3276732 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 266 |
| Conread position: | 94-291 |
| Cow position: | chr13:3058074-3058281 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 94-293 |
| Cow position: | chr13:60466373-60466165 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 94-455 |
| Cow position: | chr13:2388782-2389158 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 94-540 |
| Cow position: | chr13:34693201-34692739 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 297 |
| Conread position: | 94-541 |
| Cow position: | chr13:56730251-56730706 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 166 |
| Conread position: | 94-545 |
| Cow position: | chr13:17308511-17308045 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 279 |
| Conread position: | 94-545 |
| Cow position: | chr13:21840158-21840624 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 94-545 |
| Cow position: | chr13:49973720-49973253 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 296 |
| Conread position: | 94-546 |
| Cow position: | chr13:4873112-4872647 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 94-546 |
| Cow position: | chr13:34325639-34326106 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 150 |
| Conread position: | 94-547 |
| Cow position: | chr13:30656941-30657395 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 94-547 |
| Cow position: | chr13:33824699-33825162 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 116 |
| Conread position: | 95-546 |
| Cow position: | chr13:50109498-50109034 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 279 |
| Conread position: | 122-374 |
| Cow position: | chr13:4483799-4483544 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 181 |
| Conread position: | 122-545 |
| Cow position: | chr13:3654321-3654739 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 122-545 |
| Cow position: | chr13:9044505-9044081 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 268 |
| Conread position: | 122-546 |
| Cow position: | chr13:35757246-35756811 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 290 |
| Conread position: | 137-356 |
| Cow position: | chr13:4178667-4178888 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 137-371 |
| Cow position: | chr13:47230003-47230239 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 137-480 |
| Cow position: | chr13:3567778-3567423 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 254 |
| Conread position: | 137-541 |
| Cow position: | chr13:35030536-35030125 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 122, 76 |
| Conread position: | 143-265 |
| Cow position: | chr13:32545036-32544915 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 144-546 |
| Cow position: | chr13:31734108-31734510 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 84 |
| Conread position: | 144-546 |
| Cow position: | chr13:34911402-34911796 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 48 |
| Conread position: | 145-536 |
| Cow position: | chr13:19438909-19438523 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 145-547 |
| Cow position: | chr13:22185762-22186154 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 148-546 |
| Cow position: | chr13:1593182-1593583 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 194 |
| Conread position: | 148-546 |
| Cow position: | chr13:2296838-2297228 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 169, 56 |
| Conread position: | 148-546 |
| Cow position: | chr13:15924411-15924812 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 232 |
| Conread position: | 148-546 |
| Cow position: | chr13:34042396-34042794 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 128 |
| Conread position: | 148-546 |
| Cow position: | chr13:34142685-34143088 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 201 |
| Conread position: | 148-547 |
| Cow position: | chr13:2908477-2908878 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 232 |
| Conread position: | 148-547 |
| Cow position: | chr13:6668150-6668554 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 216 |
| Conread position: | 148-548 |
| Cow position: | chr13:13324722-13324321 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 216 |
| Conread position: | 149-356 |
| Cow position: | chr13:31561160-31560951 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 149-546 |
| Cow position: | chr13:4941060-4940657 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 232 |
| Conread position: | 149-546 |
| Cow position: | chr13:15520543-15520943 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 231 |
| Conread position: | 149-546 |
| Cow position: | chr13:31612364-31612765 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 149-546 |
| Cow position: | chr13:32737850-32738250 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 127 |
| Conread position: | 149-547 |
| Cow position: | chr13:31832572-31832171 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 231 |
| Conread position: | 149-548 |
| Cow position: | chr13:21131293-21130897 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 151-376 |
| Cow position: | chr13:46732256-46732478 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 122 |
| Conread position: | 153-546 |
| Cow position: | chr13:33336375-33336752 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 154-548 |
| Cow position: | chr13:23003549-23003947 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 115 |
| Conread position: | 161-298 |
| Cow position: | chr13:30238078-30237941 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 163-545 |
| Cow position: | chr13:30244776-30245163 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 7 |
| Conread position: | 173-364 |
| Cow position: | chr13:30140943-30140748 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-374 |
| Cow position: | chr13:10114748-10114906 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 216-530 |
| Cow position: | chr13:33927665-33927976 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 102, 68 |
| Conread position: | 239-544 |
| Cow position: | chr13:30302946-30302639 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 282-540 |
| Cow position: | chr13:2232499-2232236 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 288-547 |
| Cow position: | chr13:34868606-34868338 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 34, 118 |
Show alignments to all cow chromosomes.