Cow genome map

Conread name: Pig2-119G18

Conread position: 5-314
Cow position: chr14:44580955-44580640 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 88

Conread position: 5-541
Cow position: chr14:22019397-22018857 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 33

Conread position: 5-544
Cow position: chr14:40339690-40339156 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 225

Conread position: 7-540
Cow position: chr14:44130906-44130373 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 32

Conread position: 15-277
Cow position: chr14:12609177-12608902 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 15-292
Cow position: chr14:33675809-33675517 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 53, 290

Conread position: 15-364
Cow position: chr14:37413900-37414257 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 7, 15

Conread position: 15-546
Cow position: chr14:35387153-35387683 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 181

Conread position: 23-350
Cow position: chr14:38146565-38146228 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 16

Conread position: 34-471
Cow position: chr14:41407794-41407344 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 302
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 29, 157

Conread position: 34-548
Cow position: chr14:35929152-35928622 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 344
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 103

Conread position: 45-545
Cow position: chr14:45303397-45303914 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 360

Conread position: 80-540
Cow position: chr14:7830615-7831085 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 85-545
Cow position: chr14:23900879-23901354 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 288

Conread position: 93-540
Cow position: chr14:36968168-36967712 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 296

Conread position: 94-305
Cow position: chr14:45770867-45771085 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 96

Conread position: 94-313
Cow position: chr14:5201169-5201397 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 94-530
Cow position: chr14:44226309-44225872 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 168

Conread position: 94-540
Cow position: chr14:42152235-42151777 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 326

Conread position: 94-540
Cow position: chr14:44422466-44422010 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 295

Conread position: 94-540
Cow position: chr14:44855515-44855972 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 144

Conread position: 94-540
Cow position: chr14:45767914-45767459 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 275

Conread position: 94-540
Cow position: chr14:45851134-45850678 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 203

Conread position: 94-540
Cow position: chr14:47624465-47624022 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 53

Conread position: 94-545
Cow position: chr14:9045478-9045012 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 94-545
Cow position: chr14:17491544-17492010 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 94-545
Cow position: chr14:33393864-33394329 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 94-545
Cow position: chr14:45672133-45672598 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 115

Conread position: 94-546
Cow position: chr14:29047991-29048454 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 191

Conread position: 94-546
Cow position: chr14:30596472-30596930 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 94-546
Cow position: chr14:45712079-45712528 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 18

Conread position: 94-548
Cow position: chr14:23257271-23256804 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 327

Conread position: 94-548
Cow position: chr14:23690317-23690779 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 167

Conread position: 122-373
Cow position: chr14:5511703-5511445 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 153

Conread position: 122-546
Cow position: chr14:5528943-5528508 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 248

Conread position: 122-546
Cow position: chr14:11154285-11154706 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 122-546
Cow position: chr14:28993973-28994408 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 270

Conread position: 122-546
Cow position: chr14:37223782-37223349 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 123-545
Cow position: chr14:16273416-16273848 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 245

Conread position: 136-333
Cow position: chr14:42123338-42123537 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 136-364
Cow position: chr14:48405828-48406057 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 182, 69

Conread position: 136-517
Cow position: chr14:43553282-43552899 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 54

Conread position: 136-545
Cow position: chr14:750431-750016 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 227

Conread position: 137-262
Cow position: chr14:45565188-45565064 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 137-309
Cow position: chr14:45160957-45160786 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 137-372
Cow position: chr14:22242741-22242508 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 133, 197

Conread position: 137-457
Cow position: chr14:45917278-45916955 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 229

Conread position: 137-474
Cow position: chr14:13864222-13864563 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 228

Conread position: 137-526
Cow position: chr14:46084477-46084092 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 175, 80

Conread position: 137-545
Cow position: chr14:30585091-30585489 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 243

Conread position: 137-546
Cow position: chr14:45029263-45029666 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 159

Conread position: 142-546
Cow position: chr14:22031831-22032235 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 146

Conread position: 143-355
Cow position: chr14:48824436-48824226 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 0

Conread position: 143-548
Cow position: chr14:17685250-17684840 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 237

Conread position: 144-544
Cow position: chr14:13273101-13272707 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 58

Conread position: 145-372
Cow position: chr14:13479881-13480110 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 198

Conread position: 146-363
Cow position: chr14:34775378-34775163 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 153, 31

Conread position: 147-548
Cow position: chr14:38532442-38532850 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 261

Conread position: 148-266
Cow position: chr14:12743219-12743337 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 148-373
Cow position: chr14:19620069-19619844 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 185

Conread position: 148-376
Cow position: chr14:44287401-44287633 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 174, 0

Conread position: 148-504
Cow position: chr14:13778804-13778456 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 152

Conread position: 148-544
Cow position: chr14:17001210-17001606 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 33

Conread position: 148-545
Cow position: chr14:2284188-2283786 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 201

Conread position: 148-546
Cow position: chr14:13302877-13302478 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 46

Conread position: 148-546
Cow position: chr14:15276731-15277131 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 231

Conread position: 148-546
Cow position: chr14:16919841-16920235 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 241

Conread position: 148-546
Cow position: chr14:19328419-19328822 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 232

Conread position: 148-546
Cow position: chr14:20782305-20781903 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 151

Conread position: 148-546
Cow position: chr14:44685892-44685495 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 187

Conread position: 148-546
Cow position: chr14:46464921-46464517 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 10

Conread position: 148-546
Cow position: chr14:50134923-50134519 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 263

Conread position: 148-547
Cow position: chr14:50110415-50110027 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 271
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 194, 166

Conread position: 148-548
Cow position: chr14:45834003-45833606 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 158

Conread position: 149-505
Cow position: chr14:41084937-41085294 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 80

Conread position: 149-530
Cow position: chr14:38816362-38816736 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 166, 29

Conread position: 149-540
Cow position: chr14:13660144-13660534 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 53

Conread position: 149-540
Cow position: chr14:47654588-47654199 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 205

Conread position: 149-544
Cow position: chr14:45205925-45205519 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 166, 23

Conread position: 149-546
Cow position: chr14:7472222-7471823 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 145

Conread position: 149-546
Cow position: chr14:31887518-31887125 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 259
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 163, 60

Conread position: 149-546
Cow position: chr14:44377285-44376883 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 273
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 31, 186

Conread position: 149-548
Cow position: chr14:23260078-23260484 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 261
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 174, 23

Conread position: 150-372
Cow position: chr14:44551729-44551508 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 168, 181

Conread position: 154-541
Cow position: chr14:43034046-43034427 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 24

Conread position: 159-546
Cow position: chr14:41755682-41755308 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 182

Conread position: 173-546
Cow position: chr14:48254491-48254865 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 177

Conread position: 174-544
Cow position: chr14:27992486-27992851 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 238
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 143, 5

Conread position: 179-543
Cow position: chr14:14309256-14309624 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 22

Conread position: 187-354
Cow position: chr14:42198399-42198233 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 48

Conread position: 205-546
Cow position: chr14:45080312-45079981 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 110, 45

Show alignments to all cow chromosomes.