Cow genome map
Conread name: | Pig2-119G18 |
Conread position: | 1-546 |
Cow position: | chr17:15371291-15370755 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 256 |
Conread position: | 5-518 |
Cow position: | chr17:20401897-20401391 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 340 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 65, 9 |
Conread position: | 5-530 |
Cow position: | chr17:4295581-4295061 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 42 |
Conread position: | 5-538 |
Cow position: | chr17:14325274-14325808 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 80 |
Conread position: | 5-541 |
Cow position: | chr17:4081875-4081335 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 192 |
Conread position: | 46-543 |
Cow position: | chr17:42264696-42264200 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 329 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 53, 15 |
Conread position: | 56-373 |
Cow position: | chr17:31199476-31199788 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 220 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 12, 82 |
Conread position: | 57-534 |
Cow position: | chr17:23856857-23857344 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 29 |
Conread position: | 57-546 |
Cow position: | chr17:20087567-20088052 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 37 |
Conread position: | 64-545 |
Cow position: | chr17:6260014-6259523 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 22 |
Conread position: | 68-540 |
Cow position: | chr17:152301-152786 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 339 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 35, 127 |
Conread position: | 85-545 |
Cow position: | chr17:24634107-24633635 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 288 |
Conread position: | 86-547 |
Cow position: | chr17:1880245-1879771 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 8 |
Conread position: | 94-259 |
Cow position: | chr17:31767895-31768069 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 94-265 |
Cow position: | chr17:43952419-43952598 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 34, 153 |
Conread position: | 94-287 |
Cow position: | chr17:1283561-1283763 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 150 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 94-488 |
Cow position: | chr17:18026613-18027019 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 295 |
Conread position: | 94-534 |
Cow position: | chr17:1947113-1946668 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 302 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 29, 73 |
Conread position: | 94-545 |
Cow position: | chr17:2262246-2261788 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 180 |
Conread position: | 94-545 |
Cow position: | chr17:6089017-6089483 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 326 |
Conread position: | 94-545 |
Cow position: | chr17:8209250-8208785 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 281 |
Conread position: | 94-545 |
Cow position: | chr17:20665582-20666048 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 279 |
Conread position: | 94-545 |
Cow position: | chr17:44852789-44853255 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 452 |
Conread position: | 94-546 |
Cow position: | chr17:228164-228623 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 183 |
Conread position: | 94-546 |
Cow position: | chr17:15143223-15143691 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 94-548 |
Cow position: | chr17:2287530-2287065 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 295 |
Conread position: | 95-546 |
Cow position: | chr17:9653312-9653779 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 279 |
Conread position: | 95-546 |
Cow position: | chr17:27345942-27345483 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 192 |
Conread position: | 98-545 |
Cow position: | chr17:1382674-1383136 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 275 |
Conread position: | 122-544 |
Cow position: | chr17:18103572-18104000 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 259 |
Conread position: | 122-546 |
Cow position: | chr17:16859455-16859878 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 31 |
Conread position: | 122-547 |
Cow position: | chr17:19269253-19269689 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 248 |
Conread position: | 137-311 |
Cow position: | chr17:26205715-26205889 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 137-332 |
Cow position: | chr17:181455-181258 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 181, 0 |
Conread position: | 137-488 |
Cow position: | chr17:2556214-2555861 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 89 |
Conread position: | 137-544 |
Cow position: | chr17:15156872-15157281 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 193, 95 |
Conread position: | 137-545 |
Cow position: | chr17:14216931-14217346 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 228 |
Conread position: | 137-545 |
Cow position: | chr17:23324362-23324763 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 243 |
Conread position: | 137-546 |
Cow position: | chr17:2248492-2248903 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 149 |
Conread position: | 137-546 |
Cow position: | chr17:4060191-4059786 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 21 |
Conread position: | 137-547 |
Cow position: | chr17:20183139-20183552 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 139 |
Conread position: | 137-548 |
Cow position: | chr17:2173970-2173555 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 157 |
Conread position: | 139-370 |
Cow position: | chr17:40804905-40804674 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 10 |
Conread position: | 143-540 |
Cow position: | chr17:35592299-35591899 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 247 |
Conread position: | 143-546 |
Cow position: | chr17:15850482-15850076 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 237 |
Conread position: | 143-546 |
Cow position: | chr17:18185450-18185846 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 10 |
Conread position: | 144-546 |
Cow position: | chr17:14894238-14893839 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 120 |
Conread position: | 147-540 |
Cow position: | chr17:2588387-2588018 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 265 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 170, 26 |
Conread position: | 148-538 |
Cow position: | chr17:22132309-22131920 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 61 |
Conread position: | 148-540 |
Cow position: | chr17:22429413-22429798 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 62 |
Conread position: | 148-546 |
Cow position: | chr17:11087643-11088046 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 232 |
Conread position: | 148-546 |
Cow position: | chr17:13929749-13929346 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 263 |
Conread position: | 148-546 |
Cow position: | chr17:25737744-25737341 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 232 |
Conread position: | 148-548 |
Cow position: | chr17:13856688-13857097 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 243 |
Conread position: | 149-313 |
Cow position: | chr17:250019-249852 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 85, 143 |
Conread position: | 149-539 |
Cow position: | chr17:16890204-16889810 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 236 |
Conread position: | 151-544 |
Cow position: | chr17:43988611-43988214 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 101 |
Conread position: | 151-545 |
Cow position: | chr17:15435869-15435469 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 167, 229 |
Conread position: | 154-548 |
Cow position: | chr17:3642761-3643160 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 226 |
Conread position: | 163-546 |
Cow position: | chr17:24781113-24780726 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 7 |
Conread position: | 172-364 |
Cow position: | chr17:39933712-39933521 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 147 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 69, 38 |
Conread position: | 178-372 |
Cow position: | chr17:2579676-2579481 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 148 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 144, 187 |
Conread position: | 198-449 |
Cow position: | chr17:12670423-12670669 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 170 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 112, 159 |
Conread position: | 205-545 |
Cow position: | chr17:22160940-22160594 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 159 |
Conread position: | 247-547 |
Cow position: | chr17:15322791-15322501 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 206 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 78, 133 |
Show alignments to all cow chromosomes.