Cow genome map

Conread name: Pig2-119G18

Conread position: 1-546
Cow position: chr17:15371291-15370755 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 256

Conread position: 5-518
Cow position: chr17:20401897-20401391 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 340
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 9

Conread position: 5-530
Cow position: chr17:4295581-4295061 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 5-538
Cow position: chr17:14325274-14325808 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 5-541
Cow position: chr17:4081875-4081335 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 192

Conread position: 46-543
Cow position: chr17:42264696-42264200 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 329
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 15

Conread position: 56-373
Cow position: chr17:31199476-31199788 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 82

Conread position: 57-534
Cow position: chr17:23856857-23857344 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 29

Conread position: 57-546
Cow position: chr17:20087567-20088052 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 37

Conread position: 64-545
Cow position: chr17:6260014-6259523 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 68-540
Cow position: chr17:152301-152786 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 339
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 35, 127

Conread position: 85-545
Cow position: chr17:24634107-24633635 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 288

Conread position: 86-547
Cow position: chr17:1880245-1879771 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 8

Conread position: 94-259
Cow position: chr17:31767895-31768069 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 94-265
Cow position: chr17:43952419-43952598 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 153

Conread position: 94-287
Cow position: chr17:1283561-1283763 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 94-488
Cow position: chr17:18026613-18027019 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 295

Conread position: 94-534
Cow position: chr17:1947113-1946668 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 302
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 73

Conread position: 94-545
Cow position: chr17:2262246-2261788 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 180

Conread position: 94-545
Cow position: chr17:6089017-6089483 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 326

Conread position: 94-545
Cow position: chr17:8209250-8208785 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 281

Conread position: 94-545
Cow position: chr17:20665582-20666048 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 94-545
Cow position: chr17:44852789-44853255 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 452

Conread position: 94-546
Cow position: chr17:228164-228623 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 183

Conread position: 94-546
Cow position: chr17:15143223-15143691 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 94-548
Cow position: chr17:2287530-2287065 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 295

Conread position: 95-546
Cow position: chr17:9653312-9653779 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 279

Conread position: 95-546
Cow position: chr17:27345942-27345483 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 192

Conread position: 98-545
Cow position: chr17:1382674-1383136 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 275

Conread position: 122-544
Cow position: chr17:18103572-18104000 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 259

Conread position: 122-546
Cow position: chr17:16859455-16859878 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 31

Conread position: 122-547
Cow position: chr17:19269253-19269689 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 248

Conread position: 137-311
Cow position: chr17:26205715-26205889 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 137-332
Cow position: chr17:181455-181258 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 181, 0

Conread position: 137-488
Cow position: chr17:2556214-2555861 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 89

Conread position: 137-544
Cow position: chr17:15156872-15157281 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 95

Conread position: 137-545
Cow position: chr17:14216931-14217346 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 228

Conread position: 137-545
Cow position: chr17:23324362-23324763 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 243

Conread position: 137-546
Cow position: chr17:2248492-2248903 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 149

Conread position: 137-546
Cow position: chr17:4060191-4059786 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 21

Conread position: 137-547
Cow position: chr17:20183139-20183552 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 139

Conread position: 137-548
Cow position: chr17:2173970-2173555 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 157

Conread position: 139-370
Cow position: chr17:40804905-40804674 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 10

Conread position: 143-540
Cow position: chr17:35592299-35591899 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 247

Conread position: 143-546
Cow position: chr17:15850482-15850076 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 237

Conread position: 143-546
Cow position: chr17:18185450-18185846 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 10

Conread position: 144-546
Cow position: chr17:14894238-14893839 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 120

Conread position: 147-540
Cow position: chr17:2588387-2588018 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 170, 26

Conread position: 148-538
Cow position: chr17:22132309-22131920 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 61

Conread position: 148-540
Cow position: chr17:22429413-22429798 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 62

Conread position: 148-546
Cow position: chr17:11087643-11088046 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 232

Conread position: 148-546
Cow position: chr17:13929749-13929346 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 263

Conread position: 148-546
Cow position: chr17:25737744-25737341 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 232

Conread position: 148-548
Cow position: chr17:13856688-13857097 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 243

Conread position: 149-313
Cow position: chr17:250019-249852 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 143

Conread position: 149-539
Cow position: chr17:16890204-16889810 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 236

Conread position: 151-544
Cow position: chr17:43988611-43988214 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 101

Conread position: 151-545
Cow position: chr17:15435869-15435469 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 229

Conread position: 154-548
Cow position: chr17:3642761-3643160 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 226

Conread position: 163-546
Cow position: chr17:24781113-24780726 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 7

Conread position: 172-364
Cow position: chr17:39933712-39933521 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 69, 38

Conread position: 178-372
Cow position: chr17:2579676-2579481 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 144, 187

Conread position: 198-449
Cow position: chr17:12670423-12670669 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 159

Conread position: 205-545
Cow position: chr17:22160940-22160594 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 159

Conread position: 247-547
Cow position: chr17:15322791-15322501 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 78, 133

Show alignments to all cow chromosomes.