Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 4-532 |
| Cow position: | chr19:15954286-15953759 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 5-356 |
| Cow position: | chr19:35377229-35376870 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 5-401 |
| Cow position: | chr19:377462-377865 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 7-548 |
| Cow position: | chr19:30755619-30755066 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 179 |
| Conread position: | 14-340 |
| Cow position: | chr19:42648675-42649013 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 15-546 |
| Cow position: | chr19:32223008-32223549 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 226 |
| Conread position: | 19-546 |
| Cow position: | chr19:7342497-7341958 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 67 |
| Conread position: | 22-216 |
| Cow position: | chr19:27052417-27052623 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 116 |
| Conread position: | 30-373 |
| Cow position: | chr19:352565-352927 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 56-533 |
| Cow position: | chr19:6553992-6553516 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 87-363 |
| Cow position: | chr19:1032438-1032153 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 245 |
| Conread position: | 93-374 |
| Cow position: | chr19:20105070-20104777 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 94-277 |
| Cow position: | chr19:29209953-29209763 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 94-284 |
| Cow position: | chr19:28376842-28376641 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 94-374 |
| Cow position: | chr19:52151474-52151766 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 94-545 |
| Cow position: | chr19:43144072-43143606 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 94-546 |
| Cow position: | chr19:772955-772489 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 279 |
| Conread position: | 94-546 |
| Cow position: | chr19:32211717-32212180 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 249 |
| Conread position: | 94-547 |
| Cow position: | chr19:39546967-39546513 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 95-548 |
| Cow position: | chr19:170391-170852 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 166 |
| Conread position: | 114-266 |
| Cow position: | chr19:439128-439286 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 122-267 |
| Cow position: | chr19:5729154-5729002 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 122-546 |
| Cow position: | chr19:33873751-33873317 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 269 |
| Conread position: | 122-547 |
| Cow position: | chr19:28581334-28581764 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 126-285 |
| Cow position: | chr19:4532472-4532628 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 137-271 |
| Cow position: | chr19:40817399-40817533 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-539 |
| Cow position: | chr19:75965-76344 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 163 |
| Conread position: | 137-540 |
| Cow position: | chr19:416965-416549 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 137-542 |
| Cow position: | chr19:32665829-32665427 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 80 |
| Conread position: | 137-546 |
| Cow position: | chr19:38199-37786 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 139 |
| Conread position: | 137-546 |
| Cow position: | chr19:40852134-40852540 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 227 |
| Conread position: | 137-548 |
| Cow position: | chr19:32244988-32244571 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 227 |
| Conread position: | 143-546 |
| Cow position: | chr19:172508-172101 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 10 |
| Conread position: | 143-546 |
| Cow position: | chr19:33941907-33941502 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 143-547 |
| Cow position: | chr19:204258-203852 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 10 |
| Conread position: | 144-374 |
| Cow position: | chr19:2274081-2274313 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 144-546 |
| Cow position: | chr19:39390805-39390407 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 239 |
| Conread position: | 145-546 |
| Cow position: | chr19:39688824-39688434 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 148-545 |
| Cow position: | chr19:893322-893722 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 139 |
| Conread position: | 148-546 |
| Cow position: | chr19:7488606-7488203 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 258 |
| Conread position: | 148-546 |
| Cow position: | chr19:10672013-10672416 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 216 |
| Conread position: | 148-546 |
| Cow position: | chr19:40887364-40887756 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 149-364 |
| Cow position: | chr19:7449733-7449948 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 174, 43 |
| Conread position: | 149-540 |
| Cow position: | chr19:349999-350387 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 166 |
| Conread position: | 149-541 |
| Cow position: | chr19:42249096-42248711 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 149-546 |
| Cow position: | chr19:4385773-4385375 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 139 |
| Conread position: | 150-545 |
| Cow position: | chr19:439366-439752 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 215, 136 |
| Conread position: | 154-518 |
| Cow position: | chr19:42299209-42299577 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 327 |
| Conread position: | 156-540 |
| Cow position: | chr19:261728-261331 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 161, 48 |
| Conread position: | 170-540 |
| Cow position: | chr19:35979538-35979163 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 181-545 |
| Cow position: | chr19:28593537-28593167 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 137, 72 |
| Conread position: | 184-534 |
| Cow position: | chr19:31341979-31341608 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 117, 212 |
| Conread position: | 194-488 |
| Cow position: | chr19:32237440-32237730 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 23 |
| Conread position: | 205-540 |
| Cow position: | chr19:30372510-30372178 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 56 |
| Conread position: | 212-541 |
| Cow position: | chr19:20125837-20125517 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 217-540 |
| Cow position: | chr19:34640-34316 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 224-546 |
| Cow position: | chr19:55078963-55078636 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 156 |
| Conread position: | 225-548 |
| Cow position: | chr19:543410-543737 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 90, 155 |
| Conread position: | 280-544 |
| Cow position: | chr19:29209720-29209453 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 295-536 |
| Cow position: | chr19:27052623-27052865 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 321-547 |
| Cow position: | chr19:4532636-4532858 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 164, 40 |
Show alignments to all cow chromosomes.