Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 1-201 |
| Cow position: | chr23:1402525-1402739 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-294 |
| Cow position: | chr23:22875331-22875623 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 11, 159 |
| Conread position: | 5-295 |
| Cow position: | chr23:1327119-1327425 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 5-545 |
| Cow position: | chr23:19332058-19332604 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 351 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 14-463 |
| Cow position: | chr23:29474209-29474675 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 365 |
| Conread position: | 15-316 |
| Cow position: | chr23:16615655-16615968 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 201 |
| Conread position: | 15-536 |
| Cow position: | chr23:38578619-38578095 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 358 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 386 |
| Conread position: | 52-479 |
| Cow position: | chr23:31591505-31591946 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 64-545 |
| Cow position: | chr23:14974279-14974768 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 64-546 |
| Cow position: | chr23:15219603-15220104 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 76-546 |
| Cow position: | chr23:19950308-19950790 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 80-294 |
| Cow position: | chr23:2765181-2765403 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 85-545 |
| Cow position: | chr23:31447083-31446608 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 288 |
| Conread position: | 86-544 |
| Cow position: | chr23:4360096-4359625 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 94-302 |
| Cow position: | chr23:8980062-8980275 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 94-540 |
| Cow position: | chr23:4277214-4276754 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 247 |
| Conread position: | 94-545 |
| Cow position: | chr23:2312981-2313444 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 94-545 |
| Cow position: | chr23:28217549-28217085 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 272 |
| Conread position: | 94-546 |
| Cow position: | chr23:20302471-20302005 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 250 |
| Conread position: | 95-540 |
| Cow position: | chr23:5778829-5779285 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 260 |
| Conread position: | 95-546 |
| Cow position: | chr23:4434715-4434258 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 216 |
| Conread position: | 108-534 |
| Cow position: | chr23:7273876-7273461 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 161 |
| Conread position: | 122-372 |
| Cow position: | chr23:31595008-31595267 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 122-545 |
| Cow position: | chr23:4640396-4640830 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 290 |
| Conread position: | 122-546 |
| Cow position: | chr23:14965524-14965953 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 122-546 |
| Cow position: | chr23:19489770-19489331 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 286 |
| Conread position: | 122-546 |
| Cow position: | chr23:27399731-27399297 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 122-548 |
| Cow position: | chr23:4888901-4888472 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 113 |
| Conread position: | 133-546 |
| Cow position: | chr23:2026908-2027325 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 279 |
| Conread position: | 135-548 |
| Cow position: | chr23:3013855-3013438 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 245 |
| Conread position: | 136-530 |
| Cow position: | chr23:6216778-6216384 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 137-277 |
| Cow position: | chr23:29452111-29452253 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 137-511 |
| Cow position: | chr23:25683856-25684229 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 44 |
| Conread position: | 137-540 |
| Cow position: | chr23:5874575-5874976 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 25 |
| Conread position: | 137-546 |
| Cow position: | chr23:16616639-16617057 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 246 |
| Conread position: | 137-548 |
| Cow position: | chr23:22147043-22147467 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 243 |
| Conread position: | 139-540 |
| Cow position: | chr23:988443-988841 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 77 |
| Conread position: | 142-548 |
| Cow position: | chr23:13509255-13508860 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 309, 82 |
| Conread position: | 143-548 |
| Cow position: | chr23:15525810-15525402 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 10 |
| Conread position: | 144-540 |
| Cow position: | chr23:1024864-1025260 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 21 |
| Conread position: | 144-544 |
| Cow position: | chr23:967150-967552 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 95 |
| Conread position: | 148-313 |
| Cow position: | chr23:2782240-2782400 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 148-373 |
| Cow position: | chr23:2574731-2574505 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 177, 24 |
| Conread position: | 148-374 |
| Cow position: | chr23:2716584-2716358 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 167, 139 |
| Conread position: | 148-538 |
| Cow position: | chr23:2524001-2524394 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 232 |
| Conread position: | 148-546 |
| Cow position: | chr23:15177269-15176868 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 30 |
| Conread position: | 148-546 |
| Cow position: | chr23:28913592-28913206 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 46 |
| Conread position: | 148-546 |
| Cow position: | chr23:30636105-30636508 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 111 |
| Conread position: | 148-546 |
| Cow position: | chr23:36031177-36031578 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 232 |
| Conread position: | 148-547 |
| Cow position: | chr23:3881509-3881906 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 174 |
| Conread position: | 149-546 |
| Cow position: | chr23:2757789-2757373 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 231 |
| Conread position: | 149-546 |
| Cow position: | chr23:2795369-2795768 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 216 |
| Conread position: | 149-546 |
| Cow position: | chr23:20156020-20156440 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 151-356 |
| Cow position: | chr23:10903728-10903514 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 166-545 |
| Cow position: | chr23:4816253-4815866 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 243 |
| Conread position: | 187-375 |
| Cow position: | chr23:19450412-19450225 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 131, 96 |
| Conread position: | 204-546 |
| Cow position: | chr23:11778609-11778279 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 121, 10 |
| Conread position: | 217-373 |
| Cow position: | chr23:31651433-31651584 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 47 |
Show alignments to all cow chromosomes.