Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 1-548 |
| Cow position: | chr24:12797325-12797887 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 402 |
| Conread position: | 2-355 |
| Cow position: | chr24:7091154-7091522 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 2-540 |
| Cow position: | chr24:16648878-16649415 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 11-540 |
| Cow position: | chr24:35841188-35841728 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 362 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 7, 219 |
| Conread position: | 11-548 |
| Cow position: | chr24:1447987-1447438 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 15-547 |
| Cow position: | chr24:36708269-36707729 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 353 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 29-538 |
| Cow position: | chr24:36559672-36560196 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 263 |
| Conread position: | 35-254 |
| Cow position: | chr24:16376926-16376701 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 38-337 |
| Cow position: | chr24:12287989-12288304 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 178 |
| Conread position: | 63-504 |
| Cow position: | chr24:40654764-40654314 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 290 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 71-540 |
| Cow position: | chr24:14585443-14584979 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 94-545 |
| Cow position: | chr24:6024753-6025216 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 94-545 |
| Cow position: | chr24:6434585-6434120 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 196 |
| Conread position: | 94-545 |
| Cow position: | chr24:16084314-16084781 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 279 |
| Conread position: | 94-545 |
| Cow position: | chr24:33738995-33739465 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 94-546 |
| Cow position: | chr24:6084362-6083896 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 328 |
| Conread position: | 94-546 |
| Cow position: | chr24:12113702-12114157 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 94-547 |
| Cow position: | chr24:6145713-6145238 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 94-547 |
| Cow position: | chr24:22793517-22793051 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 191 |
| Conread position: | 105-546 |
| Cow position: | chr24:9188401-9188852 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 264 |
| Conread position: | 106-275 |
| Cow position: | chr24:7061722-7061544 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 106-542 |
| Cow position: | chr24:35838287-35838742 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 106-546 |
| Cow position: | chr24:9091952-9092394 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 89 |
| Conread position: | 122-374 |
| Cow position: | chr24:29187597-29187337 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 122-546 |
| Cow position: | chr24:148305-148735 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 275 |
| Conread position: | 137-305 |
| Cow position: | chr24:6645996-6645827 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 137-487 |
| Cow position: | chr24:6660306-6660668 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 236 |
| Conread position: | 137-545 |
| Cow position: | chr24:40549167-40548756 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 203 |
| Conread position: | 137-545 |
| Cow position: | chr24:44017839-44017425 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 243 |
| Conread position: | 137-546 |
| Cow position: | chr24:12485024-12485438 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 227 |
| Conread position: | 137-547 |
| Cow position: | chr24:33933659-33933245 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 243 |
| Conread position: | 148-373 |
| Cow position: | chr24:13524386-13524159 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 170, 128 |
| Conread position: | 148-380 |
| Cow position: | chr24:17696696-17696925 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 167, 17 |
| Conread position: | 148-511 |
| Cow position: | chr24:6537823-6537466 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 198 |
| Conread position: | 148-518 |
| Cow position: | chr24:14384333-14384705 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 90 |
| Conread position: | 148-540 |
| Cow position: | chr24:6335964-6335584 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 170, 11 |
| Conread position: | 148-540 |
| Cow position: | chr24:12237336-12236939 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 148-545 |
| Cow position: | chr24:8030433-8030030 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 216 |
| Conread position: | 148-546 |
| Cow position: | chr24:4415247-4415644 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 148-546 |
| Cow position: | chr24:12086480-12086077 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 242 |
| Conread position: | 148-546 |
| Cow position: | chr24:12335492-12335913 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 148-546 |
| Cow position: | chr24:22952418-22952015 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 232 |
| Conread position: | 149-367 |
| Cow position: | chr24:1437907-1438122 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 173, 68 |
| Conread position: | 149-511 |
| Cow position: | chr24:37217280-37216919 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 150-546 |
| Cow position: | chr24:19833665-19833260 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 154-364 |
| Cow position: | chr24:14873074-14873289 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 186 |
| Conread position: | 170-548 |
| Cow position: | chr24:12162134-12161756 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 10 |
| Conread position: | 187-519 |
| Cow position: | chr24:12131243-12131577 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 128, 136 |
| Conread position: | 205-546 |
| Cow position: | chr24:13188412-13188064 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 177 |
| Conread position: | 210-548 |
| Cow position: | chr24:14390511-14390848 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 174 |
| Conread position: | 212-364 |
| Cow position: | chr24:39678627-39678473 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 215-526 |
| Cow position: | chr24:38635969-38635659 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 103, 143 |
| Conread position: | 266-545 |
| Cow position: | chr24:7061264-7060981 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 273-545 |
| Cow position: | chr24:2636275-2635999 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 273-545 |
| Cow position: | chr24:6645570-6645294 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 322-542 |
| Cow position: | chr24:13531430-13531650 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 56 |
Show alignments to all cow chromosomes.