Cow genome map
| Conread name: | Pig2-119G18 |
| Conread position: | 1-485 |
| Cow position: | chr4:60264477-60264975 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 394 |
| Conread position: | 1-539 |
| Cow position: | chr4:1463848-1464394 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 1-546 |
| Cow position: | chr4:21337916-21338460 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 2-546 |
| Cow position: | chr4:28831112-28830566 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 104 |
| Conread position: | 15-540 |
| Cow position: | chr4:8598082-8598606 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 352 |
| Conread position: | 30-547 |
| Cow position: | chr4:34184827-34185338 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 189 |
| Conread position: | 33-536 |
| Cow position: | chr4:46664250-46663738 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 194 |
| Conread position: | 52-547 |
| Cow position: | chr4:11618879-11618386 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 5 |
| Conread position: | 56-545 |
| Cow position: | chr4:32212199-32211693 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 319 |
| Conread position: | 73-545 |
| Cow position: | chr4:1930613-1931094 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 94-372 |
| Cow position: | chr4:61256883-61256599 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 94-374 |
| Cow position: | chr4:9354779-9355070 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 94-535 |
| Cow position: | chr4:66178996-66179451 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 295 |
| Conread position: | 94-545 |
| Cow position: | chr4:602985-602520 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 277 |
| Conread position: | 94-545 |
| Cow position: | chr4:3125787-3125307 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 294 |
| Conread position: | 94-545 |
| Cow position: | chr4:13548021-13547554 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 322 |
| Conread position: | 94-546 |
| Cow position: | chr4:100941-101403 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 295 |
| Conread position: | 94-546 |
| Cow position: | chr4:158507-158042 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 282 |
| Conread position: | 94-546 |
| Cow position: | chr4:5880157-5879696 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 186 |
| Conread position: | 94-546 |
| Cow position: | chr4:16056593-16056130 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 184 |
| Conread position: | 94-546 |
| Cow position: | chr4:30307467-30307928 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 295 |
| Conread position: | 110-545 |
| Cow position: | chr4:528960-528519 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 254 |
| Conread position: | 111-546 |
| Cow position: | chr4:27333407-27332969 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 112-522 |
| Cow position: | chr4:40824290-40824695 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 206, 7 |
| Conread position: | 113-546 |
| Cow position: | chr4:29531751-29532188 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 91 |
| Conread position: | 117-546 |
| Cow position: | chr4:44725049-44724609 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 269 |
| Conread position: | 122-545 |
| Cow position: | chr4:13492536-13492103 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 122-546 |
| Cow position: | chr4:12241257-12241693 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 265 |
| Conread position: | 122-546 |
| Cow position: | chr4:18516857-18516422 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 264 |
| Conread position: | 122-546 |
| Cow position: | chr4:24445246-24445673 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 201 |
| Conread position: | 122-546 |
| Cow position: | chr4:25599658-25600086 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 264 |
| Conread position: | 122-547 |
| Cow position: | chr4:45049338-45049774 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 122-548 |
| Cow position: | chr4:57979588-57979155 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 136-351 |
| Cow position: | chr4:1496818-1497035 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 182, 200 |
| Conread position: | 137-274 |
| Cow position: | chr4:4416022-4415885 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-321 |
| Cow position: | chr4:9587203-9587019 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-545 |
| Cow position: | chr4:47764231-47764644 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 72 |
| Conread position: | 137-545 |
| Cow position: | chr4:65223594-65224008 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 227 |
| Conread position: | 145-545 |
| Cow position: | chr4:6214632-6215025 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 148-374 |
| Cow position: | chr4:12587227-12586999 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 148-485 |
| Cow position: | chr4:41119942-41119601 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 232 |
| Conread position: | 148-540 |
| Cow position: | chr4:66925925-66925536 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 49 |
| Conread position: | 148-541 |
| Cow position: | chr4:11393417-11393805 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 164, 90 |
| Conread position: | 148-544 |
| Cow position: | chr4:6268699-6269101 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 216 |
| Conread position: | 148-545 |
| Cow position: | chr4:18424596-18424994 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 148-546 |
| Cow position: | chr4:355838-355437 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 78 |
| Conread position: | 148-546 |
| Cow position: | chr4:3961520-3961118 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 194 |
| Conread position: | 148-546 |
| Cow position: | chr4:4906075-4905680 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 232 |
| Conread position: | 148-546 |
| Cow position: | chr4:6490436-6490820 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 146 |
| Conread position: | 148-546 |
| Cow position: | chr4:26886935-26887317 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 12 |
| Conread position: | 148-546 |
| Cow position: | chr4:43319718-43320110 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 30 |
| Conread position: | 148-546 |
| Cow position: | chr4:43881037-43880635 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 90 |
| Conread position: | 148-546 |
| Cow position: | chr4:48026325-48025928 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 5 |
| Conread position: | 148-548 |
| Cow position: | chr4:16359812-16359411 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 232 |
| Conread position: | 148-548 |
| Cow position: | chr4:17926326-17926728 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 232 |
| Conread position: | 149-541 |
| Cow position: | chr4:3830403-3830014 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 169, 89 |
| Conread position: | 149-541 |
| Cow position: | chr4:39272009-39272408 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 149-544 |
| Cow position: | chr4:969115-969509 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 149-546 |
| Cow position: | chr4:33073182-33073571 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 149-546 |
| Cow position: | chr4:36896295-36895900 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 28 |
| Conread position: | 149-547 |
| Cow position: | chr4:4176357-4175962 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 169, 188 |
| Conread position: | 150-538 |
| Cow position: | chr4:47717680-47718073 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 77 |
| Conread position: | 150-546 |
| Cow position: | chr4:41331365-41330966 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 214 |
| Conread position: | 154-517 |
| Cow position: | chr4:17530507-17530862 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 170, 93 |
| Conread position: | 163-326 |
| Cow position: | chr4:27443371-27443203 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 169-381 |
| Cow position: | chr4:23493641-23493432 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 149, 12 |
| Conread position: | 175-517 |
| Cow position: | chr4:496056-496386 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 198-380 |
| Cow position: | chr4:60673743-60673564 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 124, 48 |
| Conread position: | 219-546 |
| Cow position: | chr4:33493666-33493338 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 123 |
| Conread position: | 264-545 |
| Cow position: | chr4:31669123-31668841 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 116 |
Show alignments to all cow chromosomes.