Cow genome map

Conread name: Pig2-119G18

Conread position: 1-303
Cow position: chr7:24934551-24934864 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 93

Conread position: 1-344
Cow position: chr7:29470536-29470180 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 1-376
Cow position: chr7:68777743-68778129 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 190

Conread position: 1-516
Cow position: chr7:29370180-29370696 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 66

Conread position: 1-546
Cow position: chr7:3155194-3154634 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 207

Conread position: 2-530
Cow position: chr7:63021258-63020721 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 63

Conread position: 2-540
Cow position: chr7:51014355-51013827 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 5-306
Cow position: chr7:55280391-55280705 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 11, 203

Conread position: 5-345
Cow position: chr7:52804308-52804658 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 31

Conread position: 5-540
Cow position: chr7:6488924-6489452 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 137

Conread position: 14-548
Cow position: chr7:39555693-39556241 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 349
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 73, 272

Conread position: 15-325
Cow position: chr7:63550300-63550614 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 19

Conread position: 15-540
Cow position: chr7:21310606-21310067 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 15-540
Cow position: chr7:47051086-47050561 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 263

Conread position: 15-542
Cow position: chr7:1399961-1400504 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 22

Conread position: 15-548
Cow position: chr7:35287154-35287711 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 165

Conread position: 20-350
Cow position: chr7:49291058-49290714 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 15

Conread position: 22-217
Cow position: chr7:54195862-54196071 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 7

Conread position: 31-381
Cow position: chr7:60856844-60857201 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 32, 171

Conread position: 33-246
Cow position: chr7:53991135-53990909 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 19

Conread position: 33-381
Cow position: chr7:39107855-39108216 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 34-514
Cow position: chr7:58377832-58378305 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 313
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 290

Conread position: 34-546
Cow position: chr7:59136782-59136285 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 332
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 74

Conread position: 34-547
Cow position: chr7:3730358-3729827 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 346
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 27

Conread position: 35-449
Cow position: chr7:58993572-58993151 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 277
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 33, 228

Conread position: 56-357
Cow position: chr7:68857752-68858071 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 261

Conread position: 64-514
Cow position: chr7:23836464-23836007 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 306
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 7

Conread position: 69-540
Cow position: chr7:41490451-41489977 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 25

Conread position: 72-545
Cow position: chr7:23815631-23816118 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 22

Conread position: 80-502
Cow position: chr7:35296939-35297374 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 86-545
Cow position: chr7:27101796-27102258 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 279

Conread position: 94-316
Cow position: chr7:20515454-20515685 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 88

Conread position: 94-540
Cow position: chr7:20799128-20799581 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 94-540
Cow position: chr7:21975429-21975877 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 94-540
Cow position: chr7:67417360-67416903 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 94-544
Cow position: chr7:6648338-6648802 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 328

Conread position: 94-544
Cow position: chr7:20528357-20528822 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 94-545
Cow position: chr7:16554-17020 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 295

Conread position: 94-545
Cow position: chr7:3300838-3301302 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 94-545
Cow position: chr7:6642559-6643020 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 280

Conread position: 94-545
Cow position: chr7:11446874-11446408 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 296

Conread position: 94-545
Cow position: chr7:11466421-11466882 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 125

Conread position: 94-546
Cow position: chr7:63385658-63385202 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 108

Conread position: 94-546
Cow position: chr7:68479485-68479019 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 279

Conread position: 94-548
Cow position: chr7:52119767-52120229 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 275

Conread position: 106-548
Cow position: chr7:36085633-36085188 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 295

Conread position: 111-347
Cow position: chr7:5183703-5183459 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 0

Conread position: 117-547
Cow position: chr7:21127371-21127806 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 76

Conread position: 122-518
Cow position: chr7:10431131-10431537 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 264

Conread position: 122-545
Cow position: chr7:14139314-14139744 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 275

Conread position: 122-546
Cow position: chr7:13537297-13537731 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 62

Conread position: 122-546
Cow position: chr7:39792042-39791592 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 122-546
Cow position: chr7:45948865-45949295 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 288

Conread position: 123-372
Cow position: chr7:33878085-33878336 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 124

Conread position: 136-548
Cow position: chr7:26894018-26893600 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 137-338
Cow position: chr7:43830759-43830959 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 190, 0

Conread position: 137-514
Cow position: chr7:1449749-1449370 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 16

Conread position: 137-531
Cow position: chr7:25439771-25439391 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 23

Conread position: 137-539
Cow position: chr7:994496-994093 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 188, 21

Conread position: 137-540
Cow position: chr7:41869679-41870073 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 244

Conread position: 137-544
Cow position: chr7:48633643-48633253 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 76

Conread position: 137-546
Cow position: chr7:46901815-46902224 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 17

Conread position: 137-546
Cow position: chr7:61559479-61559065 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 226

Conread position: 137-546
Cow position: chr7:68908093-68907699 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 100

Conread position: 139-546
Cow position: chr7:21985663-21985251 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 241

Conread position: 141-546
Cow position: chr7:67799113-67798704 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 266

Conread position: 143-532
Cow position: chr7:68085048-68084654 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 256
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 182, 199

Conread position: 143-546
Cow position: chr7:21234752-21235159 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 91

Conread position: 143-546
Cow position: chr7:55537658-55538065 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 10

Conread position: 144-537
Cow position: chr7:38536766-38536379 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 16

Conread position: 144-546
Cow position: chr7:27786880-27786476 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 32

Conread position: 145-546
Cow position: chr7:5662632-5662228 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 182

Conread position: 148-345
Cow position: chr7:60463404-60463205 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 170, 0

Conread position: 148-540
Cow position: chr7:26891062-26890660 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 275

Conread position: 148-544
Cow position: chr7:20555969-20555567 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 232

Conread position: 148-544
Cow position: chr7:54603106-54602705 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 258

Conread position: 148-545
Cow position: chr7:1372397-1372800 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 216

Conread position: 148-545
Cow position: chr7:3234428-3234831 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 232

Conread position: 148-545
Cow position: chr7:21320411-21320008 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 216

Conread position: 148-546
Cow position: chr7:446376-446779 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 232

Conread position: 148-546
Cow position: chr7:7257450-7257060 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 211

Conread position: 148-546
Cow position: chr7:8144989-8145385 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 232

Conread position: 148-546
Cow position: chr7:19924569-19924962 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 33

Conread position: 148-546
Cow position: chr7:33405987-33406391 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 68

Conread position: 148-546
Cow position: chr7:34486169-34485762 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 249

Conread position: 148-546
Cow position: chr7:64241693-64242090 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 232

Conread position: 148-547
Cow position: chr7:1357431-1357818 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 185

Conread position: 148-548
Cow position: chr7:24808212-24808615 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 258

Conread position: 149-364
Cow position: chr7:68478695-68478482 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 24

Conread position: 149-391
Cow position: chr7:751170-750928 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 74

Conread position: 149-521
Cow position: chr7:51084856-51084495 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 243
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 176, 89

Conread position: 149-540
Cow position: chr7:24056536-24056145 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 259
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 80, 28

Conread position: 149-548
Cow position: chr7:1610957-1611358 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 232

Conread position: 149-548
Cow position: chr7:26924785-26925186 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 83

Conread position: 150-313
Cow position: chr7:62679417-62679580 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 150-313
Cow position: chr7:68232193-68232030 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 151-543
Cow position: chr7:26026287-26025893 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 87

Conread position: 155-505
Cow position: chr7:34149346-34148986 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 186

Conread position: 206-540
Cow position: chr7:68778179-68778505 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 99, 203

Conread position: 235-546
Cow position: chr7:27144494-27144179 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 87, 177

Conread position: 242-545
Cow position: chr7:47375158-47374849 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 164

Conread position: 244-539
Cow position: chr7:68435887-68436187 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 14

Conread position: 247-542
Cow position: chr7:26884281-26883986 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 64, 141

Conread position: 286-546
Cow position: chr7:545327-545066 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 78

Conread position: 414-540
Cow position: chr7:21241809-21241938 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.