Cow genome map

Conread name: Pig2-119G18

Conread position: 1-505
Cow position: chr8:33430515-33430017 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 68

Conread position: 1-538
Cow position: chr8:44693885-44693343 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 239

Conread position: 1-540
Cow position: chr8:11969995-11970515 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 1-544
Cow position: chr8:45160770-45161323 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 2-538
Cow position: chr8:24419935-24420477 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 206

Conread position: 5-241
Cow position: chr8:47673071-47672820 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 5-376
Cow position: chr8:25543102-25542714 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 13-336
Cow position: chr8:8533029-8533371 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 11, 185

Conread position: 15-381
Cow position: chr8:12543465-12543830 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 54, 94

Conread position: 15-547
Cow position: chr8:38606938-38607476 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 189

Conread position: 17-267
Cow position: chr8:16083914-16083651 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 52, 63

Conread position: 17-547
Cow position: chr8:45693038-45693587 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 359
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 264

Conread position: 22-225
Cow position: chr8:44076312-44076522 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 8

Conread position: 23-356
Cow position: chr8:42467902-42467557 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 84, 38

Conread position: 23-547
Cow position: chr8:23765825-23766347 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 103

Conread position: 33-539
Cow position: chr8:61034789-61035319 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 312

Conread position: 34-357
Cow position: chr8:46632830-46633163 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 183

Conread position: 34-383
Cow position: chr8:46221765-46222130 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 67

Conread position: 34-546
Cow position: chr8:24915768-24916297 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 359

Conread position: 35-233
Cow position: chr8:58186948-58187142 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 29

Conread position: 51-516
Cow position: chr8:42161183-42161650 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 120

Conread position: 54-543
Cow position: chr8:23217302-23216784 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 57-540
Cow position: chr8:32931048-32930560 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 29

Conread position: 81-517
Cow position: chr8:1348718-1349175 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 13

Conread position: 86-546
Cow position: chr8:2886263-2885784 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 8

Conread position: 86-546
Cow position: chr8:32631515-32631983 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 93-371
Cow position: chr8:21158312-21158599 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 203

Conread position: 94-449
Cow position: chr8:6065263-6065629 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 279

Conread position: 94-460
Cow position: chr8:11821817-11821441 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 187

Conread position: 94-517
Cow position: chr8:1319550-1319113 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 296

Conread position: 94-540
Cow position: chr8:47670955-47670502 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 41

Conread position: 94-541
Cow position: chr8:45189589-45189140 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 193

Conread position: 94-544
Cow position: chr8:1153802-1154268 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 295

Conread position: 94-544
Cow position: chr8:8518078-8518539 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 127

Conread position: 94-545
Cow position: chr8:8655713-8656176 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 256

Conread position: 94-545
Cow position: chr8:9275516-9275059 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 212

Conread position: 94-545
Cow position: chr8:22571790-22572255 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 251

Conread position: 94-545
Cow position: chr8:27578907-27578447 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 229

Conread position: 94-545
Cow position: chr8:46091378-46091822 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 38

Conread position: 94-545
Cow position: chr8:47074773-47074310 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 130

Conread position: 94-546
Cow position: chr8:9735752-9735288 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 295

Conread position: 94-546
Cow position: chr8:45316620-45317083 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 392

Conread position: 94-547
Cow position: chr8:10748880-10748415 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 293

Conread position: 95-545
Cow position: chr8:47069300-47069767 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 329

Conread position: 111-546
Cow position: chr8:5016666-5016222 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 275

Conread position: 122-373
Cow position: chr8:14591428-14591696 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 0

Conread position: 122-375
Cow position: chr8:12449422-12449164 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 226

Conread position: 122-544
Cow position: chr8:25776199-25776623 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 264

Conread position: 122-544
Cow position: chr8:50994262-50993828 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 295

Conread position: 122-545
Cow position: chr8:47661851-47662286 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 291

Conread position: 122-546
Cow position: chr8:25522875-25522438 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 122-546
Cow position: chr8:32319075-32319507 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 247

Conread position: 122-546
Cow position: chr8:36636069-36636502 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 115

Conread position: 122-546
Cow position: chr8:49214901-49214469 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 264

Conread position: 122-546
Cow position: chr8:59262419-59262854 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 264

Conread position: 137-295
Cow position: chr8:51667843-51668002 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 137-371
Cow position: chr8:26005144-26005381 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 48, 79

Conread position: 137-381
Cow position: chr8:11761732-11761487 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 81

Conread position: 137-526
Cow position: chr8:61066793-61067180 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 129

Conread position: 137-542
Cow position: chr8:8229328-8229738 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 243

Conread position: 137-544
Cow position: chr8:8556695-8557107 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 243

Conread position: 137-546
Cow position: chr8:23771088-23770679 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 137-547
Cow position: chr8:45448910-45448487 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 28

Conread position: 137-548
Cow position: chr8:11832153-11831735 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 245

Conread position: 140-546
Cow position: chr8:25407895-25407488 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 240

Conread position: 143-546
Cow position: chr8:39195771-39196176 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 10

Conread position: 143-548
Cow position: chr8:19050923-19050525 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 220

Conread position: 145-538
Cow position: chr8:9540050-9540442 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 57

Conread position: 148-294
Cow position: chr8:34348120-34347975 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 148-363
Cow position: chr8:60060824-60060607 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 148-380
Cow position: chr8:15687715-15687950 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 198

Conread position: 148-381
Cow position: chr8:11774352-11774122 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 45

Conread position: 148-463
Cow position: chr8:47491389-47491697 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 93, 199

Conread position: 148-496
Cow position: chr8:27925757-27925417 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 138

Conread position: 148-518
Cow position: chr8:14928551-14928923 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 216

Conread position: 148-527
Cow position: chr8:47885475-47885093 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 44

Conread position: 148-528
Cow position: chr8:13736084-13735707 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 29

Conread position: 148-544
Cow position: chr8:2170937-2171339 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 232

Conread position: 148-544
Cow position: chr8:11801676-11801277 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 246

Conread position: 148-545
Cow position: chr8:4686835-4686435 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 232

Conread position: 148-545
Cow position: chr8:17311460-17311059 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 233

Conread position: 148-545
Cow position: chr8:38390810-38390408 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 232

Conread position: 148-546
Cow position: chr8:3856572-3856974 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 232

Conread position: 148-546
Cow position: chr8:8910663-8910263 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 175

Conread position: 148-546
Cow position: chr8:10743188-10743591 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 148-546
Cow position: chr8:33588816-33588418 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 120

Conread position: 148-546
Cow position: chr8:44036336-44036741 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 103

Conread position: 148-546
Cow position: chr8:50288709-50289111 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 216

Conread position: 148-547
Cow position: chr8:42484354-42483967 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 131

Conread position: 149-355
Cow position: chr8:19330177-19329969 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 149-371
Cow position: chr8:42759385-42759161 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 169, 0

Conread position: 149-381
Cow position: chr8:11056307-11056071 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 124

Conread position: 149-531
Cow position: chr8:50934542-50934177 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 176, 129

Conread position: 149-546
Cow position: chr8:3785151-3784750 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 231

Conread position: 149-546
Cow position: chr8:44244132-44244535 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 232

Conread position: 153-546
Cow position: chr8:36637221-36637617 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 78

Conread position: 156-540
Cow position: chr8:27983361-27983752 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 237

Conread position: 158-547
Cow position: chr8:8316211-8316596 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 12

Conread position: 170-544
Cow position: chr8:13809021-13808644 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 150, 202

Conread position: 181-548
Cow position: chr8:9135492-9135854 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 134, 83

Conread position: 183-548
Cow position: chr8:24876306-24876665 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 135, 153

Conread position: 187-540
Cow position: chr8:53427724-53427374 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 193

Conread position: 213-357
Cow position: chr8:9263870-9264017 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 220-546
Cow position: chr8:8401829-8402162 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 102, 183

Conread position: 411-541
Cow position: chr8:36292346-36292215 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 42

Show alignments to all cow chromosomes.