Cow genome map

Conread name: Pig2-121K23

Conread position: 1-197
Cow position: chr1:68219063-68218863 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 177

Conread position: 1-522
Cow position: chr1:13879915-13880428 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 219

Conread position: 1-544
Cow position: chr1:63501240-63501782 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 217

Conread position: 2-245
Cow position: chr1:76703587-76703350 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 55

Conread position: 2-348
Cow position: chr1:82407559-82407211 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 91, 58

Conread position: 2-413
Cow position: chr1:29950526-29950120 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 78

Conread position: 2-428
Cow position: chr1:98783835-98784265 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 2-446
Cow position: chr1:1461546-1461099 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 164

Conread position: 2-457
Cow position: chr1:57661322-57661755 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 2-459
Cow position: chr1:33388076-33388538 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 227

Conread position: 2-480
Cow position: chr1:31366296-31365810 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 120

Conread position: 2-497
Cow position: chr1:55775935-55776420 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 331
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 63, 84

Conread position: 2-501
Cow position: chr1:86699437-86698930 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 455

Conread position: 2-508
Cow position: chr1:28872858-28873368 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 84

Conread position: 2-509
Cow position: chr1:89899920-89899409 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 2-525
Cow position: chr1:97123614-97124120 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 349
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 20

Conread position: 2-526
Cow position: chr1:52233319-52232802 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 31

Conread position: 2-531
Cow position: chr1:40684909-40684371 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 84

Conread position: 2-538
Cow position: chr1:59210353-59209813 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 84

Conread position: 2-544
Cow position: chr1:61738723-61738192 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 154

Conread position: 2-544
Cow position: chr1:80556268-80555753 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 3-211
Cow position: chr1:85881524-85881737 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 4-234
Cow position: chr1:5501758-5501991 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 82

Conread position: 4-234
Cow position: chr1:89809837-89809606 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 146

Conread position: 4-300
Cow position: chr1:40513714-40513415 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 150

Conread position: 4-304
Cow position: chr1:62806023-62805715 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 85

Conread position: 4-307
Cow position: chr1:59674272-59674574 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 115

Conread position: 4-354
Cow position: chr1:25549846-25550197 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 82

Conread position: 4-372
Cow position: chr1:28276424-28276796 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 59

Conread position: 4-396
Cow position: chr1:79920944-79920544 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 213

Conread position: 4-452
Cow position: chr1:72187088-72186633 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 50

Conread position: 4-459
Cow position: chr1:89740460-89740023 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 168

Conread position: 4-460
Cow position: chr1:33895462-33895927 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-476
Cow position: chr1:69287774-69287307 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 27

Conread position: 4-498
Cow position: chr1:102549016-102549530 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 339
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 61, 12

Conread position: 4-501
Cow position: chr1:63606000-63605494 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 467

Conread position: 4-502
Cow position: chr1:55276703-55276196 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-503
Cow position: chr1:33550706-33551207 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 4-508
Cow position: chr1:42736240-42736746 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 82

Conread position: 4-508
Cow position: chr1:72981050-72981561 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 85

Conread position: 4-508
Cow position: chr1:85780995-85780486 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 82

Conread position: 4-510
Cow position: chr1:18244606-18244088 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 222

Conread position: 4-510
Cow position: chr1:69402775-69403276 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 213

Conread position: 4-511
Cow position: chr1:56489622-56490138 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 214

Conread position: 4-521
Cow position: chr1:40307850-40308366 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 57

Conread position: 4-521
Cow position: chr1:45097491-45098003 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 100

Conread position: 4-521
Cow position: chr1:57656341-57656852 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 51

Conread position: 4-521
Cow position: chr1:72656765-72657295 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 4-521
Cow position: chr1:88635158-88635679 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 64

Conread position: 4-522
Cow position: chr1:13645514-13646020 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 124

Conread position: 4-522
Cow position: chr1:38414591-38415106 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 21

Conread position: 4-522
Cow position: chr1:87207628-87207120 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 69

Conread position: 4-523
Cow position: chr1:8824845-8825358 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 4-523
Cow position: chr1:22000174-21999649 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 86

Conread position: 4-523
Cow position: chr1:57567733-57568260 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 82

Conread position: 4-523
Cow position: chr1:76545757-76545230 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 4-523
Cow position: chr1:76623162-76622649 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 79

Conread position: 4-523
Cow position: chr1:79457184-79456664 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 83

Conread position: 4-523
Cow position: chr1:102435245-102434731 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 188

Conread position: 4-525
Cow position: chr1:34689126-34689652 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 4-525
Cow position: chr1:62854044-62853528 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 51

Conread position: 4-526
Cow position: chr1:53045998-53045476 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 227

Conread position: 4-526
Cow position: chr1:87244582-87245123 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 65

Conread position: 4-529
Cow position: chr1:82652420-82652970 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 84

Conread position: 4-529
Cow position: chr1:100597599-100597059 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 284

Conread position: 4-530
Cow position: chr1:67286273-67286802 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 347
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 101

Conread position: 4-531
Cow position: chr1:76752867-76752338 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 79

Conread position: 4-532
Cow position: chr1:79336021-79335488 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 453

Conread position: 4-532
Cow position: chr1:82918875-82918343 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 80

Conread position: 4-532
Cow position: chr1:101858197-101857668 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 20

Conread position: 4-537
Cow position: chr1:67835355-67834816 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 122

Conread position: 4-538
Cow position: chr1:11292321-11291780 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 213

Conread position: 4-538
Cow position: chr1:17012953-17012413 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 239

Conread position: 4-538
Cow position: chr1:18880602-18880067 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 64

Conread position: 4-538
Cow position: chr1:20828672-20829215 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 454

Conread position: 4-538
Cow position: chr1:33851062-33851603 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-538
Cow position: chr1:39543554-39544095 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-538
Cow position: chr1:40053138-40053681 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 460

Conread position: 4-538
Cow position: chr1:61308785-61309328 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 213

Conread position: 4-538
Cow position: chr1:62925396-62925939 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 213

Conread position: 4-538
Cow position: chr1:71562792-71562247 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 80

Conread position: 4-538
Cow position: chr1:82564287-82564829 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 121

Conread position: 4-538
Cow position: chr1:89425373-89425899 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 347
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 82

Conread position: 4-538
Cow position: chr1:91898783-91899322 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 91

Conread position: 4-538
Cow position: chr1:93854303-93854845 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 82

Conread position: 5-265
Cow position: chr1:32361329-32361067 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 90, 63

Conread position: 5-438
Cow position: chr1:86608985-86609428 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 61

Conread position: 5-479
Cow position: chr1:18406406-18405932 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 123

Conread position: 5-521
Cow position: chr1:28801642-28801092 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 151

Conread position: 5-521
Cow position: chr1:101149627-101150141 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 52

Conread position: 5-522
Cow position: chr1:91718850-91718330 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 188

Conread position: 5-523
Cow position: chr1:25180247-25179722 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 81

Conread position: 5-523
Cow position: chr1:57367348-57366824 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 122

Conread position: 5-525
Cow position: chr1:52918832-52918317 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 56

Conread position: 5-529
Cow position: chr1:69536693-69537214 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 6-281
Cow position: chr1:67313711-67313985 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 111

Conread position: 6-501
Cow position: chr1:49974406-49973903 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 6-501
Cow position: chr1:52359491-52358990 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 322

Conread position: 7-329
Cow position: chr1:87969137-87969466 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 76, 61

Conread position: 7-406
Cow position: chr1:77163567-77163949 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 174

Conread position: 7-508
Cow position: chr1:72080558-72081073 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 82

Conread position: 7-522
Cow position: chr1:54366031-54365524 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 7-544
Cow position: chr1:19992888-19992362 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 54

Conread position: 7-544
Cow position: chr1:21356823-21356321 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 7-544
Cow position: chr1:99374759-99375282 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 169

Conread position: 8-521
Cow position: chr1:77112651-77112144 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 75

Conread position: 9-511
Cow position: chr1:27306181-27305704 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 336
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 88, 47

Conread position: 9-544
Cow position: chr1:99021167-99020632 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 154

Conread position: 10-525
Cow position: chr1:79109086-79109583 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 116

Conread position: 11-529
Cow position: chr1:18014397-18013872 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 44

Conread position: 11-544
Cow position: chr1:82355518-82356045 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 198

Conread position: 13-532
Cow position: chr1:78289673-78290180 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 14-185
Cow position: chr1:55323729-55323554 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 150

Conread position: 17-525
Cow position: chr1:5318556-5319054 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 186

Conread position: 17-538
Cow position: chr1:8554124-8554654 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 441

Conread position: 19-503
Cow position: chr1:84149213-84149708 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 50

Conread position: 24-510
Cow position: chr1:25887342-25886866 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 36

Conread position: 24-523
Cow position: chr1:91893308-91892815 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 72

Conread position: 25-523
Cow position: chr1:62244844-62244339 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 61

Conread position: 26-538
Cow position: chr1:30283731-30283217 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 65

Conread position: 28-498
Cow position: chr1:21476205-21476675 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 297
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 189

Conread position: 28-525
Cow position: chr1:31330977-31330482 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 31

Conread position: 28-526
Cow position: chr1:72136450-72136952 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 132

Conread position: 29-421
Cow position: chr1:38385473-38385084 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 54

Conread position: 34-525
Cow position: chr1:73009613-73010087 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 74

Conread position: 50-480
Cow position: chr1:99910783-99911225 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 11

Conread position: 51-432
Cow position: chr1:44101910-44101531 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 51-538
Cow position: chr1:13450043-13450532 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 56-264
Cow position: chr1:17946549-17946750 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 27

Conread position: 57-539
Cow position: chr1:59644696-59645161 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 57-543
Cow position: chr1:39482145-39481653 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 163

Conread position: 60-544
Cow position: chr1:15025739-15026220 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 157

Conread position: 88-523
Cow position: chr1:73071187-73070748 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 367

Conread position: 117-522
Cow position: chr1:32342175-32341771 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 145

Conread position: 129-453
Cow position: chr1:20988864-20989196 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 111, 95

Conread position: 144-538
Cow position: chr1:29362223-29362622 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 69

Conread position: 151-523
Cow position: chr1:58884134-58883759 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 303

Conread position: 194-544
Cow position: chr1:77655684-77656024 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 201-538
Cow position: chr1:31396680-31397016 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 5

Conread position: 219-523
Cow position: chr1:94659691-94659990 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 131

Conread position: 256-538
Cow position: chr1:82913099-82912818 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 162, 16

Conread position: 276-544
Cow position: chr1:98865090-98864823 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 180

Conread position: 287-544
Cow position: chr1:44138271-44138018 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 33

Conread position: 288-522
Cow position: chr1:38396303-38396538 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 163

Show alignments to all cow chromosomes.