Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 2-258 |
| Cow position: | chr13:46732842-46732587 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 152, 72 |
| Conread position: | 2-501 |
| Cow position: | chr13:35756749-35757256 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 2-522 |
| Cow position: | chr13:34936647-34937184 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 221 |
| Conread position: | 2-524 |
| Cow position: | chr13:60701765-60701266 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 2-538 |
| Cow position: | chr13:32986538-32986004 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 4-149 |
| Cow position: | chr13:32525234-32525085 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-197 |
| Cow position: | chr13:3058482-3058285 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 4-315 |
| Cow position: | chr13:2232170-2232489 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 281 |
| Conread position: | 4-318 |
| Cow position: | chr13:34868280-34868605 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 4-391 |
| Cow position: | chr13:33928048-33927665 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 4-438 |
| Cow position: | chr13:30245223-30244780 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 4-480 |
| Cow position: | chr13:33336812-33336349 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 4-503 |
| Cow position: | chr13:34042854-34042352 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-507 |
| Cow position: | chr13:2908933-2908428 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 62 |
| Conread position: | 4-511 |
| Cow position: | chr13:30657450-30656952 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-521 |
| Cow position: | chr13:33825217-33824699 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-521 |
| Cow position: | chr13:34692674-34693201 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 4-522 |
| Cow position: | chr13:34187177-34186651 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 216 |
| Conread position: | 4-523 |
| Cow position: | chr13:3654800-3654288 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 349 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr13:15924872-15924348 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr13:31612825-31612300 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-525 |
| Cow position: | chr13:30140504-30141045 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 4-528 |
| Cow position: | chr13:22186206-22185697 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 4-529 |
| Cow position: | chr13:3276668-3277199 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 213 |
| Conread position: | 4-530 |
| Cow position: | chr13:31832119-31832642 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 4-530 |
| Cow position: | chr13:50108977-50109507 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-531 |
| Cow position: | chr13:9044021-9044543 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-532 |
| Cow position: | chr13:1593644-1593111 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 141 |
| Conread position: | 4-532 |
| Cow position: | chr13:62328071-62327538 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 4-533 |
| Cow position: | chr13:4940597-4941135 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-538 |
| Cow position: | chr13:13324268-13324802 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 4-538 |
| Cow position: | chr13:17307991-17308528 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 4-538 |
| Cow position: | chr13:21840684-21840141 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr13:31734570-31734032 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-543 |
| Cow position: | chr13:34143146-34142598 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 215 |
| Conread position: | 4-544 |
| Cow position: | chr13:31560704-31561241 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 5-220 |
| Cow position: | chr13:47859965-47860178 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 5-508 |
| Cow position: | chr13:15521002-15520493 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 84 |
| Conread position: | 6-538 |
| Cow position: | chr13:2297286-2296758 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 345 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 7-503 |
| Cow position: | chr13:6668610-6668106 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 289 |
| Conread position: | 7-526 |
| Cow position: | chr13:2306017-2306531 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 209 |
| Conread position: | 29-526 |
| Cow position: | chr13:56730743-56730247 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 130 |
| Conread position: | 40-530 |
| Cow position: | chr13:49973229-49973729 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 159-538 |
| Cow position: | chr13:2389153-2388765 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 42, 305 |
| Conread position: | 314-538 |
| Cow position: | chr13:60466165-60466390 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 142 |
| Conread position: | 344-523 |
| Cow position: | chr13:32544917-32545095 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 106 |
| Conread position: | 361-544 |
| Cow position: | chr13:32524922-32524737 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 362-529 |
| Cow position: | chr13:676752-676920 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 94 |
| Conread position: | 368-539 |
| Cow position: | chr13:43850278-43850108 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 51 |
Show alignments to all cow chromosomes.