Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 2-268 |
| Cow position: | chr14:47921391-47921657 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 181 |
| Conread position: | 2-452 |
| Cow position: | chr14:7471761-7472217 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 2-522 |
| Cow position: | chr14:23529614-23529098 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 353 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 96, 31 |
| Conread position: | 2-542 |
| Cow position: | chr14:35928566-35929105 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 57 |
| Conread position: | 4-310 |
| Cow position: | chr14:13622223-13621910 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 4-372 |
| Cow position: | chr14:11467986-11468348 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 57, 177 |
| Conread position: | 4-496 |
| Cow position: | chr14:46084012-46084504 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 324 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 117 |
| Conread position: | 4-503 |
| Cow position: | chr14:19328879-19328375 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 82 |
| Conread position: | 4-503 |
| Cow position: | chr14:37223289-37223794 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-504 |
| Cow position: | chr14:50109967-50110460 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 335 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 4-508 |
| Cow position: | chr14:16273909-16273398 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-508 |
| Cow position: | chr14:44685435-44685941 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 268 |
| Conread position: | 4-510 |
| Cow position: | chr14:45712588-45712091 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 158 |
| Conread position: | 4-521 |
| Cow position: | chr14:23690837-23690317 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 4-521 |
| Cow position: | chr14:40339097-40339594 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 4-522 |
| Cow position: | chr14:13660600-13660074 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 147 |
| Conread position: | 4-522 |
| Cow position: | chr14:42151711-42152236 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 158 |
| Conread position: | 4-523 |
| Cow position: | chr14:11154766-11154254 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-523 |
| Cow position: | chr14:16920295-16919778 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 4-523 |
| Cow position: | chr14:17001668-17001147 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 423 |
| Conread position: | 4-523 |
| Cow position: | chr14:20781843-20782368 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-523 |
| Cow position: | chr14:28994468-28993942 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-523 |
| Cow position: | chr14:45303973-45303451 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 212 |
| Conread position: | 4-525 |
| Cow position: | chr14:14309677-14309159 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 65 |
| Conread position: | 4-525 |
| Cow position: | chr14:43034490-43033979 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 4-525 |
| Cow position: | chr14:43552807-43553337 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 160 |
| Conread position: | 4-526 |
| Cow position: | chr14:36967646-36968171 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 4-526 |
| Cow position: | chr14:44856038-44855511 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 158 |
| Conread position: | 4-526 |
| Cow position: | chr14:45767393-45767918 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-529 |
| Cow position: | chr14:30585549-30585032 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-529 |
| Cow position: | chr14:30596981-30596463 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 341 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 233, 38 |
| Conread position: | 4-530 |
| Cow position: | chr14:33394389-33393855 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 201 |
| Conread position: | 4-532 |
| Cow position: | chr14:22018792-22019314 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 133 |
| Conread position: | 4-532 |
| Cow position: | chr14:44225801-44226320 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 47 |
| Conread position: | 4-532 |
| Cow position: | chr14:45833551-45834076 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 340 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 4-536 |
| Cow position: | chr14:45205460-45206006 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 4-537 |
| Cow position: | chr14:749956-750498 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr14:17492070-17491527 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr14:23256748-23257288 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 4-538 |
| Cow position: | chr14:45672658-45672116 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 204 |
| Conread position: | 5-148 |
| Cow position: | chr14:34774983-34775129 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-372 |
| Cow position: | chr14:44782868-44782498 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 80 |
| Conread position: | 5-522 |
| Cow position: | chr14:47623957-47624465 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 5-525 |
| Cow position: | chr14:35387743-35387235 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 6-347 |
| Cow position: | chr14:33235392-33235720 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 6-523 |
| Cow position: | chr14:5528456-5528974 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 6-543 |
| Cow position: | chr14:13302420-13302961 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 210 |
| Conread position: | 7-538 |
| Cow position: | chr14:9044955-9045495 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 80 |
| Conread position: | 8-402 |
| Cow position: | chr14:45079925-45080312 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 60, 129 |
| Conread position: | 8-508 |
| Cow position: | chr14:48150548-48150042 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 340 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 149, 56 |
| Conread position: | 9-529 |
| Cow position: | chr14:45850620-45851141 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 9-544 |
| Cow position: | chr14:48406274-48405755 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 7 |
| Conread position: | 13-522 |
| Cow position: | chr14:47654147-47654652 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 13-525 |
| Cow position: | chr14:47589269-47589782 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 19-544 |
| Cow position: | chr14:30707266-30706757 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 201 |
| Conread position: | 29-502 |
| Cow position: | chr14:13272670-13273139 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 308 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 36, 213 |
| Conread position: | 34-150 |
| Cow position: | chr14:9516978-9516858 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 40-526 |
| Cow position: | chr14:47640572-47641055 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 315 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 40-544 |
| Cow position: | chr14:38816774-38816276 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 135 |
| Conread position: | 51-501 |
| Cow position: | chr14:23260493-23260036 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 163 |
| Conread position: | 64-525 |
| Cow position: | chr14:13326675-13326230 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 120-518 |
| Cow position: | chr14:42123678-42123291 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 79 |
| Conread position: | 241-452 |
| Cow position: | chr14:5511453-5511665 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 278-528 |
| Cow position: | chr14:32534077-32533842 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 12, 5 |
| Conread position: | 378-525 |
| Cow position: | chr14:33235732-33235879 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 78 |
Show alignments to all cow chromosomes.