Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 1-517 |
| Cow position: | chr16:2411931-2411409 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 88 |
| Conread position: | 1-522 |
| Cow position: | chr16:47562730-47563258 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 2-459 |
| Cow position: | chr16:36232565-36232112 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 2-504 |
| Cow position: | chr16:27734765-27734253 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 2-523 |
| Cow position: | chr16:26662790-26663315 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 2-523 |
| Cow position: | chr16:29046060-29046588 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 456 |
| Conread position: | 2-538 |
| Cow position: | chr16:6942662-6943215 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 215 |
| Conread position: | 2-544 |
| Cow position: | chr16:28438742-28438194 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 4-189 |
| Cow position: | chr16:7676652-7676468 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-220 |
| Cow position: | chr16:16687911-16688131 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 153 |
| Conread position: | 4-236 |
| Cow position: | chr16:49236073-49235838 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 177 |
| Conread position: | 4-237 |
| Cow position: | chr16:55080310-55080081 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 4-245 |
| Cow position: | chr16:44965100-44965337 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 4-329 |
| Cow position: | chr16:29676264-29675937 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 61, 208 |
| Conread position: | 4-351 |
| Cow position: | chr16:1430269-1430618 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 4-354 |
| Cow position: | chr16:54647368-54647715 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 219 |
| Conread position: | 4-494 |
| Cow position: | chr16:25166751-25167201 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 58 |
| Conread position: | 4-501 |
| Cow position: | chr16:10437299-10437788 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 4-508 |
| Cow position: | chr16:10204373-10203878 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 4-510 |
| Cow position: | chr16:5918526-5919037 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-511 |
| Cow position: | chr16:56551170-56551675 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 125 |
| Conread position: | 4-521 |
| Cow position: | chr16:7905685-7906185 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 4-521 |
| Cow position: | chr16:20255269-20254745 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 213 |
| Conread position: | 4-521 |
| Cow position: | chr16:25187683-25188208 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-522 |
| Cow position: | chr16:11052214-11052726 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 4-523 |
| Cow position: | chr16:407990-407465 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 4-523 |
| Cow position: | chr16:8817063-8816538 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 256 |
| Conread position: | 4-523 |
| Cow position: | chr16:12538883-12538359 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 258 |
| Conread position: | 4-523 |
| Cow position: | chr16:23253462-23252941 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 82 |
| Conread position: | 4-525 |
| Cow position: | chr16:42740380-42739856 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 215 |
| Conread position: | 4-525 |
| Cow position: | chr16:51685485-51686004 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 50 |
| Conread position: | 4-528 |
| Cow position: | chr16:36362306-36361789 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 150 |
| Conread position: | 4-530 |
| Cow position: | chr16:10808208-10808727 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 4-530 |
| Cow position: | chr16:28171317-28170788 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-531 |
| Cow position: | chr16:1568408-1567881 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 4-531 |
| Cow position: | chr16:15183848-15184376 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-531 |
| Cow position: | chr16:43898227-43897698 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 288 |
| Conread position: | 4-532 |
| Cow position: | chr16:2484095-2483563 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 4-532 |
| Cow position: | chr16:15491749-15492283 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 454 |
| Conread position: | 4-532 |
| Cow position: | chr16:23982353-23982884 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 192 |
| Conread position: | 4-532 |
| Cow position: | chr16:25341013-25341539 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-532 |
| Cow position: | chr16:31592865-31592328 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 413 |
| Conread position: | 4-538 |
| Cow position: | chr16:5660902-5661433 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 5-503 |
| Cow position: | chr16:28472053-28471554 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 333 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-508 |
| Cow position: | chr16:15565793-15566296 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-522 |
| Cow position: | chr16:25157174-25156657 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 105 |
| Conread position: | 6-281 |
| Cow position: | chr16:23670547-23670272 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 88, 62 |
| Conread position: | 6-530 |
| Cow position: | chr16:36282442-36282972 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 108 |
| Conread position: | 6-538 |
| Cow position: | chr16:31792-32321 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 7-529 |
| Cow position: | chr16:6549477-6548949 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 13-466 |
| Cow position: | chr16:5651802-5652247 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 160 |
| Conread position: | 14-450 |
| Cow position: | chr16:11111885-11111447 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 141 |
| Conread position: | 14-452 |
| Cow position: | chr16:55111795-55111346 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 196 |
| Conread position: | 14-525 |
| Cow position: | chr16:49257515-49257014 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 9 |
| Conread position: | 18-526 |
| Cow position: | chr16:39820694-39821200 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 64 |
| Conread position: | 19-257 |
| Cow position: | chr16:41758406-41758177 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 30-322 |
| Cow position: | chr16:29091916-29091621 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 38, 183 |
| Conread position: | 39-365 |
| Cow position: | chr16:5888559-5888875 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 54-523 |
| Cow position: | chr16:5483416-5483889 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 92 |
| Conread position: | 56-354 |
| Cow position: | chr16:44388482-44388179 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 56-427 |
| Cow position: | chr16:26650528-26650899 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 62-544 |
| Cow position: | chr16:24155339-24154856 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 85-508 |
| Cow position: | chr16:14666705-14666277 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 143-537 |
| Cow position: | chr16:25294027-25294409 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 44 |
| Conread position: | 165-543 |
| Cow position: | chr16:10566074-10565693 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 267-544 |
| Cow position: | chr16:41758137-41757860 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 102 |
Show alignments to all cow chromosomes.