Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 2-525 |
| Cow position: | chr17:14325877-14325366 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 2-529 |
| Cow position: | chr17:4059724-4060252 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 2-532 |
| Cow position: | chr17:4081269-4081784 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 102 |
| Conread position: | 2-538 |
| Cow position: | chr17:15435407-15435952 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 456 |
| Conread position: | 2-539 |
| Cow position: | chr17:23857416-23856873 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 152 |
| Conread position: | 4-129 |
| Cow position: | chr17:1284139-1284012 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 4-180 |
| Cow position: | chr17:11782989-11783169 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-193 |
| Cow position: | chr17:2737996-2738189 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-234 |
| Cow position: | chr17:28109705-28109935 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 4-248 |
| Cow position: | chr17:13893914-13893670 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 4-252 |
| Cow position: | chr17:40804017-40804266 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 4-354 |
| Cow position: | chr17:15322449-15322785 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 272, 51 |
| Conread position: | 4-402 |
| Cow position: | chr17:22160534-22160940 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-438 |
| Cow position: | chr17:24780666-24781109 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-450 |
| Cow position: | chr17:39933304-39933728 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 4-452 |
| Cow position: | chr17:20183607-20183156 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 156 |
| Conread position: | 4-503 |
| Cow position: | chr17:13929286-13929793 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 454 |
| Conread position: | 4-508 |
| Cow position: | chr17:14893781-14894283 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 7 |
| Conread position: | 4-521 |
| Cow position: | chr17:1946594-1947113 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 360 |
| Conread position: | 4-521 |
| Cow position: | chr17:18185906-18185391 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 188 |
| Conread position: | 4-523 |
| Cow position: | chr17:3643218-3642692 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-523 |
| Cow position: | chr17:11088103-11087580 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 4-523 |
| Cow position: | chr17:19269746-19269222 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 4-525 |
| Cow position: | chr17:6002392-6001871 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 4-526 |
| Cow position: | chr17:228683-228159 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-526 |
| Cow position: | chr17:35591833-35592362 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 213 |
| Conread position: | 4-529 |
| Cow position: | chr17:2173495-2174031 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 56, 283 |
| Conread position: | 4-529 |
| Cow position: | chr17:15157341-15156812 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 4-532 |
| Cow position: | chr17:1879710-1880249 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 4-532 |
| Cow position: | chr17:13857155-13856614 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 217 |
| Conread position: | 4-532 |
| Cow position: | chr17:44853310-44852777 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 4-538 |
| Cow position: | chr17:1383193-1382653 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-538 |
| Cow position: | chr17:2248963-2248423 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr17:6089543-6089000 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-538 |
| Cow position: | chr17:8208728-8209267 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-538 |
| Cow position: | chr17:9653831-9653295 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 4-538 |
| Cow position: | chr17:14217406-14216865 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-538 |
| Cow position: | chr17:20666108-20665565 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 5-230 |
| Cow position: | chr17:3710440-3710216 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 5-479 |
| Cow position: | chr17:249542-250040 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 336 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 5-480 |
| Cow position: | chr17:22429863-22429392 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 274 |
| Conread position: | 6-508 |
| Cow position: | chr17:16889745-16890254 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 156 |
| Conread position: | 6-523 |
| Cow position: | chr17:15850018-15850541 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 6-525 |
| Cow position: | chr17:4294998-4295491 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 344 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 11-538 |
| Cow position: | chr17:15143739-15143206 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 13-430 |
| Cow position: | chr17:4671822-4672236 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 295 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 14-511 |
| Cow position: | chr17:27345433-27345931 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 247 |
| Conread position: | 14-525 |
| Cow position: | chr17:152839-152329 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 23-349 |
| Cow position: | chr17:18301996-18301699 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 47-420 |
| Cow position: | chr17:14308638-14308270 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 51-452 |
| Cow position: | chr17:20088062-20087669 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 51-523 |
| Cow position: | chr17:6259510-6259988 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 398 |
| Conread position: | 76-386 |
| Cow position: | chr17:15381688-15381988 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 344-538 |
| Cow position: | chr17:43952596-43952402 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 67, 39 |
Show alignments to all cow chromosomes.