Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 1-508 |
| Cow position: | chr18:44601366-44601856 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 2-504 |
| Cow position: | chr18:16393817-16393312 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 201 |
| Conread position: | 2-523 |
| Cow position: | chr18:37504889-37505415 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 453 |
| Conread position: | 2-543 |
| Cow position: | chr18:1520953-1521521 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 203 |
| Conread position: | 2-544 |
| Cow position: | chr18:46878163-46877635 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 183 |
| Conread position: | 4-184 |
| Cow position: | chr18:54269296-54269476 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 94, 79 |
| Conread position: | 4-190 |
| Cow position: | chr18:37585837-37585648 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 4-194 |
| Cow position: | chr18:19540049-19539855 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 4-234 |
| Cow position: | chr18:51660243-51660476 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-276 |
| Cow position: | chr18:27986855-27987132 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 4-328 |
| Cow position: | chr18:44621585-44621917 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-329 |
| Cow position: | chr18:16660178-16659846 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 4-366 |
| Cow position: | chr18:45958520-45958874 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 4-451 |
| Cow position: | chr18:32293601-32294046 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 4-501 |
| Cow position: | chr18:51257809-51258314 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 121 |
| Conread position: | 4-503 |
| Cow position: | chr18:51480666-51481172 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 4-510 |
| Cow position: | chr18:16078529-16079057 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 4-510 |
| Cow position: | chr18:43147098-43146586 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 158 |
| Conread position: | 4-521 |
| Cow position: | chr18:6869429-6868907 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 4-521 |
| Cow position: | chr18:48221703-48222230 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 213 |
| Conread position: | 4-521 |
| Cow position: | chr18:53785667-53786189 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 156 |
| Conread position: | 4-522 |
| Cow position: | chr18:33335697-33336214 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 4-522 |
| Cow position: | chr18:35335315-35335831 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 188 |
| Conread position: | 4-523 |
| Cow position: | chr18:14415805-14416327 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 4-523 |
| Cow position: | chr18:16176780-16176266 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 4-523 |
| Cow position: | chr18:33268667-33269179 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 137 |
| Conread position: | 4-523 |
| Cow position: | chr18:36508159-36508684 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-523 |
| Cow position: | chr18:40478209-40478734 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 4-525 |
| Cow position: | chr18:37599701-37599187 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 151 |
| Conread position: | 4-526 |
| Cow position: | chr18:39748408-39748933 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-531 |
| Cow position: | chr18:19352212-19352743 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 164 |
| Conread position: | 4-532 |
| Cow position: | chr18:2019857-2019323 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 57 |
| Conread position: | 4-532 |
| Cow position: | chr18:23944545-23944013 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 4-532 |
| Cow position: | chr18:33358694-33359227 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 4-538 |
| Cow position: | chr18:11275274-11274737 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr18:47741844-47742387 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr18:51689453-51689993 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 212 |
| Conread position: | 4-538 |
| Cow position: | chr18:55089099-55088555 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 110 |
| Conread position: | 4-544 |
| Cow position: | chr18:9186937-9186401 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 5-508 |
| Cow position: | chr18:28974073-28973565 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 5-508 |
| Cow position: | chr18:41840998-41840487 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-510 |
| Cow position: | chr18:51310410-51310923 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 5-526 |
| Cow position: | chr18:16877313-16877824 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 335 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 6-532 |
| Cow position: | chr18:16533812-16534340 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 14-453 |
| Cow position: | chr18:18897329-18897777 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 146 |
| Conread position: | 28-525 |
| Cow position: | chr18:2887173-2886666 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 194 |
| Conread position: | 47-420 |
| Cow position: | chr18:29946064-29946433 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 51-538 |
| Cow position: | chr18:51341562-51342055 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 123-543 |
| Cow position: | chr18:36258408-36257983 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 165, 90 |
| Conread position: | 216-544 |
| Cow position: | chr18:46869133-46868816 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 45 |
Show alignments to all cow chromosomes.