Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 2-192 |
| Cow position: | chr19:17018355-17018537 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 54 |
| Conread position: | 2-381 |
| Cow position: | chr19:55078574-55078961 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 2-525 |
| Cow position: | chr19:32202586-32203098 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 57 |
| Conread position: | 2-532 |
| Cow position: | chr19:40852602-40852069 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 3-338 |
| Cow position: | chr19:32183615-32183290 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 4-295 |
| Cow position: | chr19:4532913-4532625 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-395 |
| Cow position: | chr19:20125452-20125837 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 4-402 |
| Cow position: | chr19:30372113-30372510 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 4-410 |
| Cow position: | chr19:359672-359265 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 4-411 |
| Cow position: | chr19:7405613-7405231 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 4-438 |
| Cow position: | chr19:39546458-39546896 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 64 |
| Conread position: | 4-450 |
| Cow position: | chr19:4385315-4385766 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 4-508 |
| Cow position: | chr19:203794-204303 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 84 |
| Conread position: | 4-508 |
| Cow position: | chr19:7488143-7488655 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 4-508 |
| Cow position: | chr19:32665363-32665867 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 4-521 |
| Cow position: | chr19:1031939-1032431 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 4-522 |
| Cow position: | chr19:15953692-15954193 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 43 |
| Conread position: | 4-523 |
| Cow position: | chr19:33941442-33941966 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 324 |
| Conread position: | 4-529 |
| Cow position: | chr19:37730-38259 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 4-529 |
| Cow position: | chr19:416483-417025 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 4-529 |
| Cow position: | chr19:893773-893252 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 4-532 |
| Cow position: | chr19:10672476-10671938 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-532 |
| Cow position: | chr19:39390352-39390872 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 4-538 |
| Cow position: | chr19:32212237-32211700 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 216 |
| Conread position: | 4-538 |
| Cow position: | chr19:43143549-43144089 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 5-529 |
| Cow position: | chr19:170909-170383 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 150 |
| Conread position: | 5-532 |
| Cow position: | chr19:172042-172579 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 212 |
| Conread position: | 7-431 |
| Cow position: | chr19:35979102-35979529 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 106 |
| Conread position: | 7-520 |
| Cow position: | chr19:30755010-30755523 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 197 |
| Conread position: | 7-538 |
| Cow position: | chr19:378039-377538 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 345 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 7-544 |
| Cow position: | chr19:20111387-20110889 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 63 |
| Conread position: | 13-234 |
| Cow position: | chr19:28376370-28376585 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 13-264 |
| Cow position: | chr19:561666-561410 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 207 |
| Conread position: | 15-525 |
| Cow position: | chr19:42248656-42249162 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 154 |
| Conread position: | 17-426 |
| Cow position: | chr19:543784-543368 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 17-451 |
| Cow position: | chr19:40887800-40887370 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 17-468 |
| Cow position: | chr19:15042011-15042460 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 19-371 |
| Cow position: | chr19:5864994-5864635 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 25-390 |
| Cow position: | chr19:34276-34640 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 25-503 |
| Cow position: | chr19:439795-439320 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 67 |
| Conread position: | 30-332 |
| Cow position: | chr19:29209417-29209725 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 42-453 |
| Cow position: | chr19:42299628-42299208 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 188-538 |
| Cow position: | chr19:52151813-52151457 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 273 |
| Conread position: | 219-501 |
| Cow position: | chr19:2274326-2274043 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 257-544 |
| Cow position: | chr19:17018557-17018826 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 338-503 |
| Cow position: | chr19:5729000-5729166 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 113 |
| Conread position: | 359-543 |
| Cow position: | chr19:32183288-32183109 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 64 |
Show alignments to all cow chromosomes.