Cow genome map

Conread name: Pig2-121K23

Conread position: 1-415
Cow position: chr2:20876344-20875947 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 92

Conread position: 1-525
Cow position: chr2:20874882-20874379 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 92

Conread position: 2-174
Cow position: chr2:40452800-40452970 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 66

Conread position: 2-416
Cow position: chr2:26865272-26864863 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 68, 215

Conread position: 2-452
Cow position: chr2:14560468-14560916 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 217

Conread position: 2-452
Cow position: chr2:85356496-85356042 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 147

Conread position: 2-531
Cow position: chr2:10186951-10186428 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 54

Conread position: 2-542
Cow position: chr2:3749180-3749736 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 161

Conread position: 2-544
Cow position: chr2:77207937-77208461 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 59

Conread position: 4-180
Cow position: chr2:75251035-75251207 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 52

Conread position: 4-211
Cow position: chr2:8117525-8117734 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 82

Conread position: 4-234
Cow position: chr2:45213983-45213750 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 82

Conread position: 4-263
Cow position: chr2:25888931-25888668 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 79

Conread position: 4-292
Cow position: chr2:32388839-32389126 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 131

Conread position: 4-365
Cow position: chr2:38589457-38589797 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 50

Conread position: 4-369
Cow position: chr2:10733562-10733196 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 242
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 151

Conread position: 4-370
Cow position: chr2:975998-975631 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 81

Conread position: 4-372
Cow position: chr2:72682859-72682484 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 163

Conread position: 4-438
Cow position: chr2:24145549-24145985 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 356

Conread position: 4-445
Cow position: chr2:54649525-54649100 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 93

Conread position: 4-452
Cow position: chr2:52655746-52656195 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 4-480
Cow position: chr2:202378-201909 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 121

Conread position: 4-501
Cow position: chr2:50983955-50983452 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 179

Conread position: 4-503
Cow position: chr2:42672111-42671609 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 92

Conread position: 4-504
Cow position: chr2:10712158-10711656 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 4-511
Cow position: chr2:2184984-2184469 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 4-511
Cow position: chr2:5871055-5870567 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 330
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 56

Conread position: 4-511
Cow position: chr2:44345988-44346503 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 209

Conread position: 4-511
Cow position: chr2:52152579-52152077 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 159

Conread position: 4-518
Cow position: chr2:78741407-78741927 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 103

Conread position: 4-521
Cow position: chr2:10844063-10843553 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 91

Conread position: 4-521
Cow position: chr2:11969488-11968971 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 22

Conread position: 4-521
Cow position: chr2:46945945-46946465 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 64

Conread position: 4-521
Cow position: chr2:52615744-52616270 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-522
Cow position: chr2:59414407-59413882 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 4-523
Cow position: chr2:10269384-10268862 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 4-523
Cow position: chr2:11159854-11159329 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 85

Conread position: 4-523
Cow position: chr2:16899518-16900047 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 116

Conread position: 4-523
Cow position: chr2:32654624-32655134 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 28

Conread position: 4-523
Cow position: chr2:47810288-47810811 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 45

Conread position: 4-523
Cow position: chr2:50076877-50077394 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 134

Conread position: 4-523
Cow position: chr2:52061942-52062465 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 79

Conread position: 4-523
Cow position: chr2:53329024-53329544 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 4-523
Cow position: chr2:65939174-65938652 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 85

Conread position: 4-525
Cow position: chr2:16288528-16289026 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 11

Conread position: 4-525
Cow position: chr2:63293300-63292764 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 159

Conread position: 4-526
Cow position: chr2:6772889-6772370 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 7

Conread position: 4-530
Cow position: chr2:26868549-26869076 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 64

Conread position: 4-530
Cow position: chr2:49471519-49472054 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 213

Conread position: 4-531
Cow position: chr2:422340-422873 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 45

Conread position: 4-531
Cow position: chr2:5481361-5480864 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 63

Conread position: 4-532
Cow position: chr2:19009506-19010043 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 82

Conread position: 4-538
Cow position: chr2:2413524-2412981 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 460

Conread position: 4-538
Cow position: chr2:25031203-25030661 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 4-538
Cow position: chr2:41656361-41656897 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 4-538
Cow position: chr2:44090572-44091116 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 82

Conread position: 4-538
Cow position: chr2:57334477-57335011 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 4-538
Cow position: chr2:80956370-80955821 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 219

Conread position: 4-541
Cow position: chr2:50321572-50322102 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 79

Conread position: 4-544
Cow position: chr2:15580707-15580168 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 5-394
Cow position: chr2:3730008-3730396 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 103

Conread position: 5-422
Cow position: chr2:52174041-52173627 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 90

Conread position: 5-503
Cow position: chr2:283419-282913 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 81

Conread position: 5-510
Cow position: chr2:5905574-5905077 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 139

Conread position: 5-521
Cow position: chr2:72922555-72922033 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 51

Conread position: 5-522
Cow position: chr2:28621550-28621030 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 63

Conread position: 5-530
Cow position: chr2:43958900-43959396 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 26

Conread position: 6-401
Cow position: chr2:32458732-32458332 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 354

Conread position: 6-502
Cow position: chr2:34565652-34565152 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 211

Conread position: 6-538
Cow position: chr2:51991255-51990715 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 6-544
Cow position: chr2:36991164-36991704 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 9

Conread position: 7-234
Cow position: chr2:46465934-46465706 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 28

Conread position: 7-371
Cow position: chr2:20921505-20921141 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 7-475
Cow position: chr2:4235452-4235908 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 212

Conread position: 9-525
Cow position: chr2:7210983-7211497 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 207

Conread position: 10-522
Cow position: chr2:1673369-1672869 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 47

Conread position: 10-544
Cow position: chr2:34475601-34475100 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 54

Conread position: 14-325
Cow position: chr2:41149328-41149644 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 71

Conread position: 14-354
Cow position: chr2:38372125-38372461 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 180

Conread position: 14-428
Cow position: chr2:53552458-53552873 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 281
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 142

Conread position: 19-381
Cow position: chr2:52680716-52681080 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 74, 41

Conread position: 19-544
Cow position: chr2:50402562-50403081 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 25-526
Cow position: chr2:2102171-2101668 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 36

Conread position: 26-544
Cow position: chr2:45921947-45921442 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 28-543
Cow position: chr2:11691494-11691994 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 34

Conread position: 39-320
Cow position: chr2:40245367-40245652 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 177

Conread position: 42-354
Cow position: chr2:11725159-11725473 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 9

Conread position: 50-501
Cow position: chr2:36979702-36980152 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 64-438
Cow position: chr2:47625275-47624887 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 149

Conread position: 254-511
Cow position: chr2:54737042-54737295 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 25

Conread position: 294-538
Cow position: chr2:67419729-67419484 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 162

Conread position: 296-525
Cow position: chr2:59963657-59963428 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 78, 36

Conread position: 336-544
Cow position: chr2:63977528-63977731 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 49

Show alignments to all cow chromosomes.