Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 1-501 |
| Cow position: | chr22:44933710-44934217 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 260 |
| Conread position: | 2-211 |
| Cow position: | chr22:41474608-41474390 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 2-232 |
| Cow position: | chr22:9658049-9658286 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 222 |
| Conread position: | 2-523 |
| Cow position: | chr22:17329008-17328480 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 87 |
| Conread position: | 3-404 |
| Cow position: | chr22:27386699-27386290 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 4-197 |
| Cow position: | chr22:18476029-18475836 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-438 |
| Cow position: | chr22:24949563-24950006 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-447 |
| Cow position: | chr22:36267110-36267549 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 4-453 |
| Cow position: | chr22:1321349-1321786 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 4-477 |
| Cow position: | chr22:32485599-32485139 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-501 |
| Cow position: | chr22:18816648-18816147 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 4-501 |
| Cow position: | chr22:42990905-42991410 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-503 |
| Cow position: | chr22:560966-560465 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 4-508 |
| Cow position: | chr22:21589066-21589569 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-511 |
| Cow position: | chr22:1319129-1319645 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 214 |
| Conread position: | 4-521 |
| Cow position: | chr22:5933246-5932741 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 4-521 |
| Cow position: | chr22:44369884-44369367 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 347 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-521 |
| Cow position: | chr22:46853084-46853601 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 4-523 |
| Cow position: | chr22:19143964-19143440 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 4-523 |
| Cow position: | chr22:31313078-31313598 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 78 |
| Conread position: | 4-523 |
| Cow position: | chr22:31335299-31334779 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 4-523 |
| Cow position: | chr22:36861797-36861271 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-523 |
| Cow position: | chr22:39469784-39469264 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-525 |
| Cow position: | chr22:6503937-6503415 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 194 |
| Conread position: | 4-525 |
| Cow position: | chr22:11030693-11031222 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 213 |
| Conread position: | 4-525 |
| Cow position: | chr22:39882439-39881913 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 4-526 |
| Cow position: | chr22:118082-117578 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 199 |
| Conread position: | 4-528 |
| Cow position: | chr22:32348234-32347725 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 31 |
| Conread position: | 4-529 |
| Cow position: | chr22:36736503-36737027 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 4-533 |
| Cow position: | chr22:34168065-34168601 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-538 |
| Cow position: | chr22:693365-693899 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 4-538 |
| Cow position: | chr22:1878525-1879069 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 461 |
| Conread position: | 4-538 |
| Cow position: | chr22:3278620-3278080 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr22:5233568-5233029 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 79 |
| Conread position: | 4-538 |
| Cow position: | chr22:27310043-27309497 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 457 |
| Conread position: | 4-538 |
| Cow position: | chr22:35672622-35672080 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-539 |
| Cow position: | chr22:158177-157630 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 283 |
| Conread position: | 5-504 |
| Cow position: | chr22:33350904-33351422 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 214 |
| Conread position: | 5-507 |
| Cow position: | chr22:11782797-11782286 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 5-521 |
| Cow position: | chr22:44489625-44490146 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 5-526 |
| Cow position: | chr22:7277257-7277781 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 255 |
| Conread position: | 5-532 |
| Cow position: | chr22:5672473-5673009 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 6-302 |
| Cow position: | chr22:1285196-1284894 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 59, 187 |
| Conread position: | 6-538 |
| Cow position: | chr22:27283784-27284307 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 353 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 7-197 |
| Cow position: | chr22:35943656-35943468 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 7-529 |
| Cow position: | chr22:44353211-44352697 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 8-192 |
| Cow position: | chr22:10964926-10965112 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 8-283 |
| Cow position: | chr22:302245-301969 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 8-494 |
| Cow position: | chr22:8149797-8149328 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 177 |
| Conread position: | 13-170 |
| Cow position: | chr22:8874709-8874868 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 149 |
| Conread position: | 13-452 |
| Cow position: | chr22:36274548-36274999 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 163 |
| Conread position: | 14-364 |
| Cow position: | chr22:1293753-1293395 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 22-451 |
| Cow position: | chr22:15851090-15851513 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 26-315 |
| Cow position: | chr22:13737691-13737421 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 121 |
| Conread position: | 27-525 |
| Cow position: | chr22:15956939-15956442 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 27-532 |
| Cow position: | chr22:293405-292901 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 40-538 |
| Cow position: | chr22:536870-537377 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 188 |
| Conread position: | 40-544 |
| Cow position: | chr22:871086-870582 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 167 |
| Conread position: | 42-525 |
| Cow position: | chr22:13917278-13917765 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 49-483 |
| Cow position: | chr22:20207400-20206966 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 50-523 |
| Cow position: | chr22:15314163-15313693 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 53-542 |
| Cow position: | chr22:298546-298063 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 62-230 |
| Cow position: | chr22:13493306-13493465 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 76-544 |
| Cow position: | chr22:34606871-34607337 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 77-222 |
| Cow position: | chr22:41237701-41237845 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 163-538 |
| Cow position: | chr22:10909942-10909557 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 55, 169 |
| Conread position: | 226-532 |
| Cow position: | chr22:35943250-35942941 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 207 |
| Conread position: | 293-538 |
| Cow position: | chr22:18027310-18027555 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 125, 63 |
| Conread position: | 387-524 |
| Cow position: | chr22:5941941-5941804 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 63 |
Show alignments to all cow chromosomes.