Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 2-153 |
| Cow position: | chr28:18181579-18181428 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-234 |
| Cow position: | chr28:17330744-17330515 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 33 |
| Conread position: | 2-523 |
| Cow position: | chr28:3193015-3192488 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 4-171 |
| Cow position: | chr28:2846715-2846550 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 4-177 |
| Cow position: | chr28:18089224-18089053 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 4-211 |
| Cow position: | chr28:1168386-1168178 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 4-211 |
| Cow position: | chr28:5752099-5751887 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-211 |
| Cow position: | chr28:34593621-34593828 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 4-230 |
| Cow position: | chr28:24652069-24652298 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 60, 213 |
| Conread position: | 4-234 |
| Cow position: | chr28:29819348-29819579 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-257 |
| Cow position: | chr28:2989904-2989654 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 100 |
| Conread position: | 4-261 |
| Cow position: | chr28:22827831-22828090 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 157 |
| Conread position: | 4-264 |
| Cow position: | chr28:15681671-15681924 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 4-480 |
| Cow position: | chr28:5565639-5566115 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-501 |
| Cow position: | chr28:14705893-14705389 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 4-502 |
| Cow position: | chr28:1504633-1505135 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 76 |
| Conread position: | 4-502 |
| Cow position: | chr28:17667734-17667229 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-503 |
| Cow position: | chr28:2083382-2083880 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 159 |
| Conread position: | 4-505 |
| Cow position: | chr28:782176-782682 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 4-508 |
| Cow position: | chr28:12150100-12150593 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 4-508 |
| Cow position: | chr28:15585172-15585681 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 4-511 |
| Cow position: | chr28:5812488-5812981 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 4-511 |
| Cow position: | chr28:7901132-7901654 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 4-521 |
| Cow position: | chr28:2591698-2592218 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 4-521 |
| Cow position: | chr28:9953913-9954436 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 4-522 |
| Cow position: | chr28:1387612-1387097 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 4-522 |
| Cow position: | chr28:8721664-8721146 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-523 |
| Cow position: | chr28:7001766-7002293 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr28:13459749-13460273 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 158 |
| Conread position: | 4-523 |
| Cow position: | chr28:17388259-17388785 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr28:18520683-18520156 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 213 |
| Conread position: | 4-523 |
| Cow position: | chr28:32792601-32792077 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-524 |
| Cow position: | chr28:22261373-22260846 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-525 |
| Cow position: | chr28:21358798-21359308 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 4-529 |
| Cow position: | chr28:6780551-6780022 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 339 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 4-531 |
| Cow position: | chr28:10582207-10581674 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 305 |
| Conread position: | 4-532 |
| Cow position: | chr28:8378345-8378880 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 4-538 |
| Cow position: | chr28:1952912-1953450 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 4-538 |
| Cow position: | chr28:7822032-7822578 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 4-538 |
| Cow position: | chr28:13441099-13440556 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-538 |
| Cow position: | chr28:14750326-14750867 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 380 |
| Conread position: | 5-263 |
| Cow position: | chr28:32331622-32331363 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 5-532 |
| Cow position: | chr28:9155504-9154972 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 7-169 |
| Cow position: | chr28:3774051-3773890 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 7-541 |
| Cow position: | chr28:18102145-18101625 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 20-181 |
| Cow position: | chr28:12648945-12648781 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 161 |
| Conread position: | 25-522 |
| Cow position: | chr28:24667380-24667882 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 38-508 |
| Cow position: | chr28:33252132-33252601 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 50-501 |
| Cow position: | chr28:12410383-12409943 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 304 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 50-503 |
| Cow position: | chr28:5114976-5114527 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 80-264 |
| Cow position: | chr28:17311771-17311960 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 176-544 |
| Cow position: | chr28:18181180-18180831 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 201-511 |
| Cow position: | chr28:1167897-1167589 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 77, 5 |
| Conread position: | 201-523 |
| Cow position: | chr28:34593963-34594282 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 77, 5 |
| Conread position: | 242-544 |
| Cow position: | chr28:17311968-17312264 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 108, 133 |
| Conread position: | 275-503 |
| Cow position: | chr28:29819790-29820018 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 138, 172 |
| Conread position: | 289-538 |
| Cow position: | chr28:485492-485242 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 129, 167 |
Show alignments to all cow chromosomes.