Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 2-525 |
| Cow position: | chr4:17530951-17530436 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 102 |
| Conread position: | 2-538 |
| Cow position: | chr4:602461-603002 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 2-543 |
| Cow position: | chr4:969576-969030 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 123 |
| Conread position: | 2-543 |
| Cow position: | chr4:16056071-16056612 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 2-544 |
| Cow position: | chr4:496473-495959 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 2-544 |
| Cow position: | chr4:6215088-6214551 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 218 |
| Conread position: | 2-544 |
| Cow position: | chr4:40824779-40824240 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 93 |
| Conread position: | 4-234 |
| Cow position: | chr4:1050154-1049920 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-234 |
| Cow position: | chr4:10408247-10408480 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 213 |
| Conread position: | 4-319 |
| Cow position: | chr4:11383877-11384193 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 158 |
| Conread position: | 4-388 |
| Cow position: | chr4:33493278-33493666 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-452 |
| Cow position: | chr4:4905620-4906069 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 4-478 |
| Cow position: | chr4:3829957-3830423 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 4-491 |
| Cow position: | chr4:29532248-29531753 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 4-501 |
| Cow position: | chr4:45049829-45049328 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 4-503 |
| Cow position: | chr4:41330906-41331411 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 214 |
| Conread position: | 4-504 |
| Cow position: | chr4:3961061-3961566 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 4-508 |
| Cow position: | chr4:355380-355887 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-508 |
| Cow position: | chr4:16359358-16359861 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 7 |
| Conread position: | 4-508 |
| Cow position: | chr4:17926788-17926277 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-508 |
| Cow position: | chr4:48025868-48026374 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-510 |
| Cow position: | chr4:528459-528974 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-523 |
| Cow position: | chr4:12241753-12241226 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 455 |
| Conread position: | 4-523 |
| Cow position: | chr4:18516362-18516888 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr4:43880575-43881100 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-523 |
| Cow position: | chr4:44724549-44725075 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 454 |
| Conread position: | 4-526 |
| Cow position: | chr4:66179520-66178992 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 211 |
| Conread position: | 4-526 |
| Cow position: | chr4:66925471-66925993 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 4-538 |
| Cow position: | chr4:101463-100925 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 213 |
| Conread position: | 4-538 |
| Cow position: | chr4:3125247-3125804 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr4:5879644-5880174 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 4-538 |
| Cow position: | chr4:6269162-6268623 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 4-538 |
| Cow position: | chr4:13547494-13548038 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 212 |
| Conread position: | 4-538 |
| Cow position: | chr4:18425051-18424516 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 79 |
| Conread position: | 4-538 |
| Cow position: | chr4:47764704-47764162 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 5-503 |
| Cow position: | chr4:13492043-13492548 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 84 |
| Conread position: | 5-508 |
| Cow position: | chr4:36895841-36896345 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-522 |
| Cow position: | chr4:46663671-46664184 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 118 |
| Conread position: | 5-538 |
| Cow position: | chr4:157983-158524 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 211 |
| Conread position: | 6-197 |
| Cow position: | chr4:58883207-58883018 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 6-522 |
| Cow position: | chr4:34185389-34184892 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 332 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 6-523 |
| Cow position: | chr4:43320168-43319655 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 7-479 |
| Cow position: | chr4:39272470-39271988 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 209 |
| Conread position: | 7-520 |
| Cow position: | chr4:28830507-28831020 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 146 |
| Conread position: | 9-355 |
| Cow position: | chr4:1371539-1371179 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 11-542 |
| Cow position: | chr4:4175917-4176432 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 14-228 |
| Cow position: | chr4:12608028-12607812 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 206 |
| Conread position: | 17-525 |
| Cow position: | chr4:21338507-21338008 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 18-177 |
| Cow position: | chr4:6449408-6449249 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 65 |
| Conread position: | 19-458 |
| Cow position: | chr4:15263502-15263061 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 25-451 |
| Cow position: | chr4:26887356-26886941 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 40, 137 |
| Conread position: | 27-511 |
| Cow position: | chr4:47718120-47717626 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 193 |
| Conread position: | 28-544 |
| Cow position: | chr4:22471687-22472178 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 55 |
| Conread position: | 38-299 |
| Cow position: | chr4:51044380-51044129 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 41-544 |
| Cow position: | chr4:1497249-1496749 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 165 |
| Conread position: | 53-373 |
| Cow position: | chr4:21564669-21564962 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 60-525 |
| Cow position: | chr4:14375744-14375302 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 91-499 |
| Cow position: | chr4:30283220-30283616 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 132, 67 |
| Conread position: | 206-508 |
| Cow position: | chr4:12586975-12587276 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 325-544 |
| Cow position: | chr4:17382635-17382423 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 94, 14 |
Show alignments to all cow chromosomes.