Cow genome map
Conread name: | Pig2-121K23 |
Conread position: | 1-216 |
Cow position: | chr5:49020123-49019904 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 1-327 |
Cow position: | chr5:23227818-23228147 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 228 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 66, 137 |
Conread position: | 1-523 |
Cow position: | chr5:49518224-49518744 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 82 |
Conread position: | 2-150 |
Cow position: | chr5:6180083-6180234 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 64, 121 |
Conread position: | 2-252 |
Cow position: | chr5:28570257-28570504 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 192 |
Conread position: | 2-329 |
Cow position: | chr5:10844316-10843981 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 214 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 61, 84 |
Conread position: | 2-493 |
Cow position: | chr5:58056176-58055694 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 86 |
Conread position: | 2-525 |
Cow position: | chr5:26079660-26079128 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 215 |
Conread position: | 2-533 |
Cow position: | chr5:30578881-30579419 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 120 |
Conread position: | 2-543 |
Cow position: | chr5:28022726-28023260 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 14 |
Conread position: | 2-543 |
Cow position: | chr5:41359174-41358639 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 205 |
Conread position: | 4-192 |
Cow position: | chr5:23716384-23716196 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 136 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 76, 11 |
Conread position: | 4-234 |
Cow position: | chr5:30088158-30087928 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 171 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 69, 108 |
Conread position: | 4-237 |
Cow position: | chr5:35299624-35299860 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 161 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 66, 215 |
Conread position: | 4-257 |
Cow position: | chr5:27569711-27569975 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 190 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 4-354 |
Cow position: | chr5:53714817-53715172 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 227 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 57, 65 |
Conread position: | 4-372 |
Cow position: | chr5:7273426-7273788 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 242 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 90, 56 |
Conread position: | 4-478 |
Cow position: | chr5:31102036-31101570 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 318 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 61, 204 |
Conread position: | 4-479 |
Cow position: | chr5:1342235-1341755 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 87 |
Conread position: | 4-480 |
Cow position: | chr5:3504686-3504206 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 83 |
Conread position: | 4-480 |
Cow position: | chr5:10918358-10918842 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 85 |
Conread position: | 4-480 |
Cow position: | chr5:61020279-61019805 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 64 |
Conread position: | 4-501 |
Cow position: | chr5:54793057-54792570 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 323 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 64, 185 |
Conread position: | 4-502 |
Cow position: | chr5:48809152-48808649 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 65 |
Conread position: | 4-503 |
Cow position: | chr5:24329860-24330341 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 197 |
Conread position: | 4-508 |
Cow position: | chr5:2430571-2430060 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 21 |
Conread position: | 4-511 |
Cow position: | chr5:32733684-32733177 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 130 |
Conread position: | 4-521 |
Cow position: | chr5:29008920-29009439 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 216 |
Conread position: | 4-521 |
Cow position: | chr5:41551364-41550840 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 147 |
Conread position: | 4-521 |
Cow position: | chr5:49181842-49182355 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 64 |
Conread position: | 4-523 |
Cow position: | chr5:4068551-4069074 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 76 |
Conread position: | 4-523 |
Cow position: | chr5:32945441-32945962 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 132 |
Conread position: | 4-523 |
Cow position: | chr5:55627565-55628072 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 57 |
Conread position: | 4-523 |
Cow position: | chr5:57482986-57482460 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 82 |
Conread position: | 4-525 |
Cow position: | chr5:49593898-49593366 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 182 |
Conread position: | 4-529 |
Cow position: | chr5:10776692-10776170 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 345 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 69, 122 |
Conread position: | 4-529 |
Cow position: | chr5:32772042-32772576 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 88 |
Conread position: | 4-529 |
Cow position: | chr5:64782456-64781923 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 82 |
Conread position: | 4-530 |
Cow position: | chr5:46775646-46776175 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 113 |
Conread position: | 4-536 |
Cow position: | chr5:41530008-41529494 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 80 |
Conread position: | 4-538 |
Cow position: | chr5:2530831-2531374 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 83 |
Conread position: | 4-538 |
Cow position: | chr5:3964031-3964555 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 350 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 57, 213 |
Conread position: | 4-538 |
Cow position: | chr5:4019638-4019095 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 83 |
Conread position: | 4-538 |
Cow position: | chr5:31706135-31706677 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 94 |
Conread position: | 4-538 |
Cow position: | chr5:45182541-45182000 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 53 |
Conread position: | 4-538 |
Cow position: | chr5:46663562-46664106 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 83 |
Conread position: | 4-538 |
Cow position: | chr5:48468716-48468176 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 213 |
Conread position: | 4-538 |
Cow position: | chr5:54932657-54932115 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 213 |
Conread position: | 4-538 |
Cow position: | chr5:58195563-58196105 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 83 |
Conread position: | 4-538 |
Cow position: | chr5:59060185-59060721 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 62 |
Conread position: | 4-538 |
Cow position: | chr5:59481815-59482357 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 213 |
Conread position: | 5-222 |
Cow position: | chr5:29123234-29123019 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 58, 80 |
Conread position: | 5-393 |
Cow position: | chr5:18665523-18665919 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 256 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 65, 212 |
Conread position: | 5-480 |
Cow position: | chr5:6158635-6158154 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 84 |
Conread position: | 5-480 |
Cow position: | chr5:61273606-61273143 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 61 |
Conread position: | 5-521 |
Cow position: | chr5:46644271-46644773 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 332 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 89, 68 |
Conread position: | 5-522 |
Cow position: | chr5:56858135-56857636 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 159 |
Conread position: | 5-538 |
Cow position: | chr5:24576474-24577018 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 461 |
Conread position: | 5-542 |
Cow position: | chr5:32674174-32673633 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 64 |
Conread position: | 6-403 |
Cow position: | chr5:25207176-25206773 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 54 |
Conread position: | 7-329 |
Cow position: | chr5:7811983-7811662 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 214 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 78, 55 |
Conread position: | 7-522 |
Cow position: | chr5:46739021-46738500 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 268 |
Conread position: | 8-230 |
Cow position: | chr5:51771780-51771556 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 53, 103 |
Conread position: | 9-529 |
Cow position: | chr5:45699846-45700361 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 103 |
Conread position: | 13-521 |
Cow position: | chr5:9686844-9686341 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 160 |
Conread position: | 13-525 |
Cow position: | chr5:47073481-47073985 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 55 |
Conread position: | 17-521 |
Cow position: | chr5:14346800-14346294 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 108 |
Conread position: | 25-337 |
Cow position: | chr5:34696165-34696484 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 209 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 43, 229 |
Conread position: | 25-450 |
Cow position: | chr5:2914032-2914466 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 64 |
Conread position: | 25-526 |
Cow position: | chr5:26769392-26769895 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 389 |
Conread position: | 28-237 |
Cow position: | chr5:27488604-27488816 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 153 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 38, 192 |
Conread position: | 28-402 |
Cow position: | chr5:57366432-57366058 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 42 |
Conread position: | 28-524 |
Cow position: | chr5:53627172-53626674 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 14 |
Conread position: | 28-525 |
Cow position: | chr5:51162502-51162987 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 19 |
Conread position: | 56-525 |
Cow position: | chr5:51319623-51319162 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 330 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 11, 30 |
Conread position: | 57-525 |
Cow position: | chr5:14659472-14659013 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 5 |
Conread position: | 79-532 |
Cow position: | chr5:58334945-58334500 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 138 |
Conread position: | 201-505 |
Cow position: | chr5:73489795-73489491 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 179 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 212, 9 |
Conread position: | 248-525 |
Cow position: | chr5:27489059-27489336 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 199 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 35, 64 |
Conread position: | 280-525 |
Cow position: | chr5:62848419-62848648 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 169 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 333-529 |
Cow position: | chr5:10843522-10843325 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 136 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 85, 123 |
Conread position: | 402-543 |
Cow position: | chr5:28570566-28570706 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 9, 55 |
Show alignments to all cow chromosomes.