Cow genome map
| Conread name: | Pig2-121K23 | 
| Conread position: | 1-260 | 
| Cow position: | chr6:42564643-42564903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 219 | 
| Conread position: | 1-532 | 
| Cow position: | chr6:525945-526473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 35 | 
| Conread position: | 2-149 | 
| Cow position: | chr6:59478512-59478365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 70, 30 | 
| Conread position: | 2-234 | 
| Cow position: | chr6:39437344-39437576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 59, 81 | 
| Conread position: | 2-291 | 
| Cow position: | chr6:62488478-62488182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 90, 19 | 
| Conread position: | 2-507 | 
| Cow position: | chr6:3278250-3277736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 84 | 
| Conread position: | 2-522 | 
| Cow position: | chr6:19453629-19454143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 67 | 
| Conread position: | 2-523 | 
| Cow position: | chr6:8201433-8201965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 84 | 
| Conread position: | 2-523 | 
| Cow position: | chr6:35877016-35876490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 83 | 
| Conread position: | 2-523 | 
| Cow position: | chr6:55544626-55544099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 85 | 
| Conread position: | 2-526 | 
| Cow position: | chr6:35433247-35433762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 22 | 
| Conread position: | 2-538 | 
| Cow position: | chr6:2554408-2554951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 85 | 
| Conread position: | 3-265 | 
| Cow position: | chr6:20496405-20496664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 211 | 
| Conread position: | 3-354 | 
| Cow position: | chr6:6619714-6619380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 63 | 
| Conread position: | 4-146 | 
| Cow position: | chr6:12095652-12095506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 4-189 | 
| Cow position: | chr6:12093154-12092971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 89, 62 | 
| Conread position: | 4-194 | 
| Cow position: | chr6:64714818-64715012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 61, 85 | 
| Conread position: | 4-195 | 
| Cow position: | chr6:65007546-65007733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 90, 70 | 
| Conread position: | 4-211 | 
| Cow position: | chr6:39907852-39908063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 59, 82 | 
| Conread position: | 4-211 | 
| Cow position: | chr6:40314605-40314815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 61, 100 | 
| Conread position: | 4-224 | 
| Cow position: | chr6:52804118-52804334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 59, 119 | 
| Conread position: | 4-233 | 
| Cow position: | chr6:1823544-1823317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 57, 82 | 
| Conread position: | 4-234 | 
| Cow position: | chr6:13978225-13978455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 66, 151 | 
| Conread position: | 4-234 | 
| Cow position: | chr6:47043729-47043496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 61, 213 | 
| Conread position: | 4-237 | 
| Cow position: | chr6:10054317-10054551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 65, 85 | 
| Conread position: | 4-342 | 
| Cow position: | chr6:2885926-2886256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 51, 124 | 
| Conread position: | 4-447 | 
| Cow position: | chr6:57870301-57869849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 82 | 
| Conread position: | 4-452 | 
| Cow position: | chr6:701656-702114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 82 | 
| Conread position: | 4-452 | 
| Cow position: | chr6:913334-913801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 72, 56 | 
| Conread position: | 4-452 | 
| Cow position: | chr6:33388539-33388997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 65 | 
| Conread position: | 4-469 | 
| Cow position: | chr6:42927089-42927557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 147 | 
| Conread position: | 4-480 | 
| Cow position: | chr6:5951534-5951060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 82 | 
| Conread position: | 4-502 | 
| Cow position: | chr6:27530296-27529799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 507 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 80 | 
| Conread position: | 4-503 | 
| Cow position: | chr6:36525745-36526255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 84 | 
| Conread position: | 4-508 | 
| Cow position: | chr6:3488698-3488185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 247 | 
| Conread position: | 4-508 | 
| Cow position: | chr6:6566315-6566819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 216 | 
| Conread position: | 4-518 | 
| Cow position: | chr6:41552731-41553234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 53 | 
| Conread position: | 4-521 | 
| Cow position: | chr6:10558939-10558432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 18 | 
| Conread position: | 4-521 | 
| Cow position: | chr6:13943617-13944137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 79 | 
| Conread position: | 4-522 | 
| Cow position: | chr6:35420867-35420378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 283, 44 | 
| Conread position: | 4-522 | 
| Cow position: | chr6:62396871-62397396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 273, 60 | 
| Conread position: | 4-523 | 
| Cow position: | chr6:8761598-8761077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 82 | 
| Conread position: | 4-523 | 
| Cow position: | chr6:15280840-15280324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 86 | 
| Conread position: | 4-523 | 
| Cow position: | chr6:27468961-27469475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 56 | 
| Conread position: | 4-523 | 
| Cow position: | chr6:29311198-29311719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 43 | 
| Conread position: | 4-523 | 
| Cow position: | chr6:30275480-30274951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 86 | 
| Conread position: | 4-524 | 
| Cow position: | chr6:16672089-16672614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 533 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 215 | 
| Conread position: | 4-525 | 
| Cow position: | chr6:38231977-38232509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 205 | 
| Conread position: | 4-525 | 
| Cow position: | chr6:59741346-59740827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 533 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 156 | 
| Conread position: | 4-526 | 
| Cow position: | chr6:37115840-37116367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 95 | 
| Conread position: | 4-529 | 
| Cow position: | chr6:331763-331233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 121 | 
| Conread position: | 4-529 | 
| Cow position: | chr6:13103761-13104294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 101 | 
| Conread position: | 4-529 | 
| Cow position: | chr6:43617419-43617951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 82 | 
| Conread position: | 4-529 | 
| Cow position: | chr6:59919576-59919049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 213 | 
| Conread position: | 4-531 | 
| Cow position: | chr6:34893307-34892771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 85 | 
| Conread position: | 4-531 | 
| Cow position: | chr6:65927642-65928175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 79 | 
| Conread position: | 4-532 | 
| Cow position: | chr6:17045767-17046295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 105 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:1405534-1404993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 245 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:2374409-2374945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 91 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:7141769-7141242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 59, 213 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:17598574-17598034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 80 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:28063044-28063581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 78 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:28491811-28491269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 82 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:44028753-44029284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 80 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:58409207-58408667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 90 | 
| Conread position: | 4-538 | 
| Cow position: | chr6:68026485-68027037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 82 | 
| Conread position: | 5-508 | 
| Cow position: | chr6:15141471-15140966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 83 | 
| Conread position: | 6-538 | 
| Cow position: | chr6:65822422-65821881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 110 | 
| Conread position: | 7-525 | 
| Cow position: | chr6:37642105-37642612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 177 | 
| Conread position: | 8-367 | 
| Cow position: | chr6:68362608-68362249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 86, 22 | 
| Conread position: | 8-525 | 
| Cow position: | chr6:6476748-6476258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 58, 129 | 
| Conread position: | 9-206 | 
| Cow position: | chr6:63198432-63198235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 59 | 
| Conread position: | 9-459 | 
| Cow position: | chr6:13317776-13317324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 228 | 
| Conread position: | 9-532 | 
| Cow position: | chr6:30478805-30479340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 60 | 
| Conread position: | 10-351 | 
| Cow position: | chr6:11353444-11353798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 213 | 
| Conread position: | 19-351 | 
| Cow position: | chr6:10640848-10641183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 47, 86 | 
| Conread position: | 22-429 | 
| Cow position: | chr6:39161928-39162321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 53 | 
| Conread position: | 25-403 | 
| Cow position: | chr6:49520667-49520271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 191, 26 | 
| Conread position: | 27-350 | 
| Cow position: | chr6:50497733-50497402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 38, 59 | 
| Conread position: | 28-521 | 
| Cow position: | chr6:1384117-1383651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 29, 63 | 
| Conread position: | 29-529 | 
| Cow position: | chr6:15476014-15476519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 30 | 
| Conread position: | 33-237 | 
| Cow position: | chr6:42359950-42359742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 35, 191 | 
| Conread position: | 38-477 | 
| Cow position: | chr6:28474448-28474885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 23 | 
| Conread position: | 39-521 | 
| Cow position: | chr6:1100846-1100360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 91 | 
| Conread position: | 40-543 | 
| Cow position: | chr6:10630205-10630696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 161 | 
| Conread position: | 42-515 | 
| Cow position: | chr6:13276543-13277021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 178 | 
| Conread position: | 49-501 | 
| Cow position: | chr6:34024583-34025011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 20 | 
| Conread position: | 53-530 | 
| Cow position: | chr6:16051641-16052117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 31 | 
| Conread position: | 57-475 | 
| Cow position: | chr6:48368152-48368556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 23, 7 | 
| Conread position: | 92-526 | 
| Cow position: | chr6:11402847-11403276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 275, 74 | 
| Conread position: | 105-538 | 
| Cow position: | chr6:1412131-1411695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 101, 140 | 
| Conread position: | 143-544 | 
| Cow position: | chr6:6542811-6543204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 9 | 
| Conread position: | 148-502 | 
| Cow position: | chr6:25214110-25214466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 36, 12 | 
| Conread position: | 163-510 | 
| Cow position: | chr6:51190378-51190715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 115, 63 | 
| Conread position: | 169-543 | 
| Cow position: | chr6:12095507-12095151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 27 | 
| Conread position: | 206-538 | 
| Cow position: | chr6:39908442-39908772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 72, 36 | 
| Conread position: | 217-485 | 
| Cow position: | chr6:31568881-31568614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 21, 65 | 
| Conread position: | 220-538 | 
| Cow position: | chr6:3148926-3149249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 16, 240 | 
| Conread position: | 232-525 | 
| Cow position: | chr6:47043267-47042969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 64, 224 | 
| Conread position: | 294-538 | 
| Cow position: | chr6:40251663-40251908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 124, 162 | 
Show alignments to all cow chromosomes.
