Cow genome map
| Conread name: | Pig2-121K23 |
| Conread position: | 1-542 |
| Cow position: | chr7:59027807-59028328 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 173 |
| Conread position: | 2-411 |
| Cow position: | chr7:26851035-26851439 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 202 |
| Conread position: | 2-522 |
| Cow position: | chr7:63020643-63021163 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 218 |
| Conread position: | 2-523 |
| Cow position: | chr7:45949357-45948834 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 110 |
| Conread position: | 2-538 |
| Cow position: | chr7:20528884-20528340 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 214 |
| Conread position: | 2-538 |
| Cow position: | chr7:20555508-20556049 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 80 |
| Conread position: | 2-544 |
| Cow position: | chr7:7297084-7296554 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 3-390 |
| Cow position: | chr7:67811915-67812303 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 3-477 |
| Cow position: | chr7:51084415-51084875 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 4-198 |
| Cow position: | chr7:522052-521854 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 4-296 |
| Cow position: | chr7:41487384-41487671 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 91, 61 |
| Conread position: | 4-349 |
| Cow position: | chr7:68436253-68435900 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-351 |
| Cow position: | chr7:68523673-68523332 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 57 |
| Conread position: | 4-354 |
| Cow position: | chr7:20306998-20306657 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 63, 152 |
| Conread position: | 4-354 |
| Cow position: | chr7:26883920-26884275 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 218 |
| Conread position: | 4-372 |
| Cow position: | chr7:102807-102436 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 197 |
| Conread position: | 4-436 |
| Cow position: | chr7:6489516-6489086 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 214 |
| Conread position: | 4-452 |
| Cow position: | chr7:19925019-19924575 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 4-452 |
| Cow position: | chr7:26025828-26026284 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 59, 240 |
| Conread position: | 4-452 |
| Cow position: | chr7:36085127-36085585 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 4-452 |
| Cow position: | chr7:38536316-38536757 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 4-462 |
| Cow position: | chr7:26893542-26894008 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 4-480 |
| Cow position: | chr7:41870136-41869669 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 57 |
| Conread position: | 4-494 |
| Cow position: | chr7:54515322-54514833 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 4-501 |
| Cow position: | chr7:39791530-39792052 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 4-503 |
| Cow position: | chr7:67798644-67799150 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 4-504 |
| Cow position: | chr7:1357875-1357386 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 4-504 |
| Cow position: | chr7:54602643-54603151 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-508 |
| Cow position: | chr7:8145445-8144940 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 157 |
| Conread position: | 4-508 |
| Cow position: | chr7:21127858-21127359 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 57 |
| Conread position: | 4-510 |
| Cow position: | chr7:20799639-20799140 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 63 |
| Conread position: | 4-511 |
| Cow position: | chr7:994027-994537 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 240 |
| Conread position: | 4-511 |
| Cow position: | chr7:48633198-48633686 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 4-519 |
| Cow position: | chr7:24056083-24056597 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 4-521 |
| Cow position: | chr7:21975943-21975429 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 108 |
| Conread position: | 4-521 |
| Cow position: | chr7:23816175-23815652 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 4-522 |
| Cow position: | chr7:58378403-58377892 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 4-523 |
| Cow position: | chr7:1372857-1372334 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 4-523 |
| Cow position: | chr7:10431632-10431100 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 460 |
| Conread position: | 4-523 |
| Cow position: | chr7:33406451-33405924 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 397 |
| Conread position: | 4-523 |
| Cow position: | chr7:34148902-34149416 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 51 |
| Conread position: | 4-523 |
| Cow position: | chr7:55538124-55537600 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 4-523 |
| Cow position: | chr7:64242144-64241630 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 4-525 |
| Cow position: | chr7:750720-751235 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 4-525 |
| Cow position: | chr7:21310001-21310527 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 4-525 |
| Cow position: | chr7:35287765-35287239 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 4-529 |
| Cow position: | chr7:11466942-11466413 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-530 |
| Cow position: | chr7:6643080-6642550 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 79 |
| Conread position: | 4-531 |
| Cow position: | chr7:46902284-46901756 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 4-532 |
| Cow position: | chr7:21235219-21234686 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 4-538 |
| Cow position: | chr7:17080-16537 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr7:3234891-3234348 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-538 |
| Cow position: | chr7:11446348-11446891 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 4-538 |
| Cow position: | chr7:61559005-61559548 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 213 |
| Conread position: | 4-539 |
| Cow position: | chr7:27125962-27126490 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 4-539 |
| Cow position: | chr7:30119745-30119221 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 216 |
| Conread position: | 5-508 |
| Cow position: | chr7:34485703-34486218 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 5-538 |
| Cow position: | chr7:6648861-6648321 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 80 |
| Conread position: | 6-538 |
| Cow position: | chr7:25439324-25439845 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 7-525 |
| Cow position: | chr7:59136228-59136723 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 8-526 |
| Cow position: | chr7:23835918-23836436 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 212 |
| Conread position: | 9-538 |
| Cow position: | chr7:3301357-3300821 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 446 |
| Conread position: | 13-511 |
| Cow position: | chr7:3729780-3730284 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 14-372 |
| Cow position: | chr7:53990544-53990896 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 89 |
| Conread position: | 29-526 |
| Cow position: | chr7:52120263-52119762 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 189 |
| Conread position: | 31-544 |
| Cow position: | chr7:41489938-41490449 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 40-538 |
| Cow position: | chr7:21319984-21320491 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 177 |
| Conread position: | 41-544 |
| Cow position: | chr7:68084617-68085131 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 179 |
| Conread position: | 51-538 |
| Cow position: | chr7:25101874-25102359 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 175 |
| Conread position: | 56-414 |
| Cow position: | chr7:65496950-65496604 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 153 |
| Conread position: | 57-459 |
| Cow position: | chr7:26925188-26924784 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 73-522 |
| Cow position: | chr7:29370714-29370272 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 87-532 |
| Cow position: | chr7:68328559-68328989 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 66 |
| Conread position: | 96-431 |
| Cow position: | chr7:20106401-20106068 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 141, 62 |
| Conread position: | 127-525 |
| Cow position: | chr7:68478370-68478762 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 156-515 |
| Cow position: | chr7:33074215-33073852 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 157-543 |
| Cow position: | chr7:19048938-19048559 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 157-544 |
| Cow position: | chr7:27585146-27584774 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 26 |
| Conread position: | 204-544 |
| Cow position: | chr7:63951832-63951476 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 277-511 |
| Cow position: | chr7:60463222-60463456 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 141, 179 |
| Conread position: | 359-544 |
| Cow position: | chr7:1405027-1404837 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 97 |
| Conread position: | 381-544 |
| Cow position: | chr7:26851477-26851636 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 38 |
Show alignments to all cow chromosomes.